Monthly variation in the probability of presence of adult Culicoides populations in nine European countries and the implications for targeted surveillance

Abstract Background Biting midges of the genus Culicoides (Diptera: Ceratopogonidae) are small hematophagous insects responsible for the transmission of bluetongue virus, Schmallenberg virus and African horse sickness virus to wild and domestic ruminants and equids. Outbreaks of these viruses have c...

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Main Authors: Ana Carolina Cuéllar, Lene Jung Kjær, Andreas Baum, Anders Stockmarr, Henrik Skovgard, Søren Achim Nielsen, Mats Gunnar Andersson, Anders Lindström, Jan Chirico, Renke Lühken, Sonja Steinke, Ellen Kiel, Jörn Gethmann, Franz J. Conraths, Magdalena Larska, Marcin Smreczak, Anna Orłowska, Inger Hamnes, Ståle Sviland, Petter Hopp, Katharina Brugger, Franz Rubel, Thomas Balenghien, Claire Garros, Ignace Rakotoarivony, Xavier Allène, Jonathan Lhoir, David Chavernac, Jean-Claude Delécolle, Bruno Mathieu, Delphine Delécolle, Marie-Laure Setier-Rio, Roger Venail, Bethsabée Scheid, Miguel Ángel Miranda Chueca, Carlos Barceló, Javier Lucientes, Rosa Estrada, Alexander Mathis, Wesley Tack, René Bødker
Format: Article
Language:English
Published: BMC 2018-11-01
Series:Parasites & Vectors
Subjects:
Online Access:http://link.springer.com/article/10.1186/s13071-018-3182-0
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author Ana Carolina Cuéllar
Lene Jung Kjær
Andreas Baum
Anders Stockmarr
Henrik Skovgard
Søren Achim Nielsen
Mats Gunnar Andersson
Anders Lindström
Jan Chirico
Renke Lühken
Sonja Steinke
Ellen Kiel
Jörn Gethmann
Franz J. Conraths
Magdalena Larska
Marcin Smreczak
Anna Orłowska
Inger Hamnes
Ståle Sviland
Petter Hopp
Katharina Brugger
Franz Rubel
Thomas Balenghien
Claire Garros
Ignace Rakotoarivony
Xavier Allène
Jonathan Lhoir
David Chavernac
Jean-Claude Delécolle
Bruno Mathieu
Delphine Delécolle
Marie-Laure Setier-Rio
Roger Venail
Bethsabée Scheid
Miguel Ángel Miranda Chueca
Carlos Barceló
Javier Lucientes
Rosa Estrada
Alexander Mathis
Wesley Tack
René Bødker
spellingShingle Ana Carolina Cuéllar
Lene Jung Kjær
Andreas Baum
Anders Stockmarr
Henrik Skovgard
Søren Achim Nielsen
Mats Gunnar Andersson
Anders Lindström
Jan Chirico
Renke Lühken
Sonja Steinke
Ellen Kiel
Jörn Gethmann
Franz J. Conraths
Magdalena Larska
Marcin Smreczak
Anna Orłowska
Inger Hamnes
Ståle Sviland
Petter Hopp
Katharina Brugger
Franz Rubel
Thomas Balenghien
Claire Garros
Ignace Rakotoarivony
Xavier Allène
Jonathan Lhoir
David Chavernac
Jean-Claude Delécolle
Bruno Mathieu
Delphine Delécolle
Marie-Laure Setier-Rio
Roger Venail
Bethsabée Scheid
Miguel Ángel Miranda Chueca
Carlos Barceló
Javier Lucientes
Rosa Estrada
Alexander Mathis
Wesley Tack
René Bødker
Monthly variation in the probability of presence of adult Culicoides populations in nine European countries and the implications for targeted surveillance
Parasites & Vectors
Culicoides
Random Forest
Machine Learning
Europe
Monthly distribution
Spatial distribution
author_facet Ana Carolina Cuéllar
Lene Jung Kjær
Andreas Baum
Anders Stockmarr
Henrik Skovgard
Søren Achim Nielsen
Mats Gunnar Andersson
Anders Lindström
Jan Chirico
Renke Lühken
Sonja Steinke
Ellen Kiel
Jörn Gethmann
Franz J. Conraths
Magdalena Larska
Marcin Smreczak
Anna Orłowska
Inger Hamnes
Ståle Sviland
Petter Hopp
Katharina Brugger
Franz Rubel
Thomas Balenghien
Claire Garros
Ignace Rakotoarivony
Xavier Allène
Jonathan Lhoir
David Chavernac
Jean-Claude Delécolle
Bruno Mathieu
Delphine Delécolle
Marie-Laure Setier-Rio
Roger Venail
Bethsabée Scheid
Miguel Ángel Miranda Chueca
Carlos Barceló
Javier Lucientes
Rosa Estrada
Alexander Mathis
Wesley Tack
René Bødker
author_sort Ana Carolina Cuéllar
title Monthly variation in the probability of presence of adult Culicoides populations in nine European countries and the implications for targeted surveillance
title_short Monthly variation in the probability of presence of adult Culicoides populations in nine European countries and the implications for targeted surveillance
title_full Monthly variation in the probability of presence of adult Culicoides populations in nine European countries and the implications for targeted surveillance
title_fullStr Monthly variation in the probability of presence of adult Culicoides populations in nine European countries and the implications for targeted surveillance
title_full_unstemmed Monthly variation in the probability of presence of adult Culicoides populations in nine European countries and the implications for targeted surveillance
title_sort monthly variation in the probability of presence of adult culicoides populations in nine european countries and the implications for targeted surveillance
publisher BMC
series Parasites & Vectors
issn 1756-3305
publishDate 2018-11-01
description Abstract Background Biting midges of the genus Culicoides (Diptera: Ceratopogonidae) are small hematophagous insects responsible for the transmission of bluetongue virus, Schmallenberg virus and African horse sickness virus to wild and domestic ruminants and equids. Outbreaks of these viruses have caused economic damage within the European Union. The spatio-temporal distribution of biting midges is a key factor in identifying areas with the potential for disease spread. The aim of this study was to identify and map areas of neglectable adult activity for each month in an average year. Average monthly risk maps can be used as a tool when allocating resources for surveillance and control programs within Europe. Methods We modelled the occurrence of C. imicola and the Obsoletus and Pulicaris ensembles using existing entomological surveillance data from Spain, France, Germany, Switzerland, Austria, Denmark, Sweden, Norway and Poland. The monthly probability of each vector species and ensembles being present in Europe based on climatic and environmental input variables was estimated with the machine learning technique Random Forest. Subsequently, the monthly probability was classified into three classes: Absence, Presence and Uncertain status. These three classes are useful for mapping areas of no risk, areas of high-risk targeted for animal movement restrictions, and areas with an uncertain status that need active entomological surveillance to determine whether or not vectors are present. Results The distribution of Culicoides species ensembles were in agreement with their previously reported distribution in Europe. The Random Forest models were very accurate in predicting the probability of presence for C. imicola (mean AUC = 0.95), less accurate for the Obsoletus ensemble (mean AUC = 0.84), while the lowest accuracy was found for the Pulicaris ensemble (mean AUC = 0.71). The most important environmental variables in the models were related to temperature and precipitation for all three groups. Conclusions The duration periods with low or null adult activity can be derived from the associated monthly distribution maps, and it was also possible to identify and map areas with uncertain predictions. In the absence of ongoing vector surveillance, these maps can be used by veterinary authorities to classify areas as likely vector-free or as likely risk areas from southern Spain to northern Sweden with acceptable precision. The maps can also focus costly entomological surveillance to seasons and areas where the predictions and vector-free status remain uncertain.
topic Culicoides
Random Forest
Machine Learning
Europe
Monthly distribution
Spatial distribution
url http://link.springer.com/article/10.1186/s13071-018-3182-0
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spelling doaj-85150d1098594c439ffa71d7c05875e12020-11-24T21:55:21ZengBMCParasites & Vectors1756-33052018-11-0111111910.1186/s13071-018-3182-0Monthly variation in the probability of presence of adult Culicoides populations in nine European countries and the implications for targeted surveillanceAna Carolina Cuéllar0Lene Jung Kjær1Andreas Baum2Anders Stockmarr3Henrik Skovgard4Søren Achim Nielsen5Mats Gunnar Andersson6Anders Lindström7Jan Chirico8Renke Lühken9Sonja Steinke10Ellen Kiel11Jörn Gethmann12Franz J. Conraths13Magdalena Larska14Marcin Smreczak15Anna Orłowska16Inger Hamnes17Ståle Sviland18Petter Hopp19Katharina Brugger20Franz Rubel21Thomas Balenghien22Claire Garros23Ignace Rakotoarivony24Xavier Allène25Jonathan Lhoir26David Chavernac27Jean-Claude Delécolle28Bruno Mathieu29Delphine Delécolle30Marie-Laure Setier-Rio31Roger Venail32Bethsabée Scheid33Miguel Ángel Miranda Chueca34Carlos Barceló35Javier Lucientes36Rosa Estrada37Alexander Mathis38Wesley Tack39René Bødker40Division for Diagnostics and Scientific Advice, National Veterinary Institute, Technical University of Denmark (DTU)Division for Diagnostics and Scientific Advice, National Veterinary Institute, Technical University of Denmark (DTU)Department of Applied Mathematics and Computer Science, Technical University of Denmark (DTU)Department of Applied Mathematics and Computer Science, Technical University of Denmark (DTU)Department of Agroecology - Entomology and Plant Pathology, Aarhus UniversityDepartment of Science and Environment, Roskilde UniversityNational Veterinary Institute (SVA)National Veterinary Institute (SVA)National Veterinary Institute (SVA)Bernhard Nocht Institute for Tropical Medicine, WHO Collaborating Centre for Arbovirus and Hemorrhagic Fever Reference and Research National Reference Centre for Tropical Infectious DiseasesDepartment of Biology and Environmental Sciences, Carl von Ossietzky UniversityDepartment of Biology and Environmental Sciences, Carl von Ossietzky UniversityInstitute of Epidemiology, Friedrich Loeffler InstituteInstitute of Epidemiology, Friedrich Loeffler InstituteDepartment of Virology, National Veterinary Research InstituteDepartment of Virology, National Veterinary Research InstituteDepartment of Virology, National Veterinary Research InstituteNorwegian Veterinary InstituteNorwegian Veterinary InstituteNorwegian Veterinary InstituteInstitute for Veterinary Public HealthInstitute for Veterinary Public HealthCIRAD, UMR ASTRECIRAD, UMR ASTRECIRAD, UMR ASTRECIRAD, UMR ASTRECIRAD, UMR ASTRECIRAD, UMR ASTREInstitute of Parasitology and Tropical Pathology of Strasbourg, EA7292, Université de StrasbourgInstitute of Parasitology and Tropical Pathology of Strasbourg, EA7292, Université de StrasbourgInstitute of Parasitology and Tropical Pathology of Strasbourg, EA7292, Université de StrasbourgEID MéditerranéeEID MéditerranéeEID MéditerranéeLaboratory of Zoology, University of the Balearic IslandsLaboratory of Zoology, University of the Balearic IslandsDepartment of Animal Pathology, University of ZaragozaDepartment of Animal Pathology, University of ZaragozaInstitute of Parasitology, University of ZürichAvia-GIS NVDivision for Diagnostics and Scientific Advice, National Veterinary Institute, Technical University of Denmark (DTU)Abstract Background Biting midges of the genus Culicoides (Diptera: Ceratopogonidae) are small hematophagous insects responsible for the transmission of bluetongue virus, Schmallenberg virus and African horse sickness virus to wild and domestic ruminants and equids. Outbreaks of these viruses have caused economic damage within the European Union. The spatio-temporal distribution of biting midges is a key factor in identifying areas with the potential for disease spread. The aim of this study was to identify and map areas of neglectable adult activity for each month in an average year. Average monthly risk maps can be used as a tool when allocating resources for surveillance and control programs within Europe. Methods We modelled the occurrence of C. imicola and the Obsoletus and Pulicaris ensembles using existing entomological surveillance data from Spain, France, Germany, Switzerland, Austria, Denmark, Sweden, Norway and Poland. The monthly probability of each vector species and ensembles being present in Europe based on climatic and environmental input variables was estimated with the machine learning technique Random Forest. Subsequently, the monthly probability was classified into three classes: Absence, Presence and Uncertain status. These three classes are useful for mapping areas of no risk, areas of high-risk targeted for animal movement restrictions, and areas with an uncertain status that need active entomological surveillance to determine whether or not vectors are present. Results The distribution of Culicoides species ensembles were in agreement with their previously reported distribution in Europe. The Random Forest models were very accurate in predicting the probability of presence for C. imicola (mean AUC = 0.95), less accurate for the Obsoletus ensemble (mean AUC = 0.84), while the lowest accuracy was found for the Pulicaris ensemble (mean AUC = 0.71). The most important environmental variables in the models were related to temperature and precipitation for all three groups. Conclusions The duration periods with low or null adult activity can be derived from the associated monthly distribution maps, and it was also possible to identify and map areas with uncertain predictions. In the absence of ongoing vector surveillance, these maps can be used by veterinary authorities to classify areas as likely vector-free or as likely risk areas from southern Spain to northern Sweden with acceptable precision. The maps can also focus costly entomological surveillance to seasons and areas where the predictions and vector-free status remain uncertain.http://link.springer.com/article/10.1186/s13071-018-3182-0CulicoidesRandom ForestMachine LearningEuropeMonthly distributionSpatial distribution