Integrated network pharmacology and molecular docking approaches to reveal the synergistic mechanism of multiple components in Venenum Bufonis for ameliorating heart failure
Venenum Bufonis (VB), also called Chan Su in China, has been extensively used as a traditional Chinese medicine (TCM) for treating heart failure (HF) since ancient time. However, the active components and the potential anti-HF mechanism of VB remain unclear. In the current study, the major absorbed...
Main Authors: | , , , , , , , , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
PeerJ Inc.
2020-10-01
|
Series: | PeerJ |
Subjects: | |
Online Access: | https://peerj.com/articles/10107.pdf |
id |
doaj-86acea8692ba412f9f48bde441c92f69 |
---|---|
record_format |
Article |
spelling |
doaj-86acea8692ba412f9f48bde441c92f692020-11-25T03:41:23ZengPeerJ Inc.PeerJ2167-83592020-10-018e1010710.7717/peerj.10107Integrated network pharmacology and molecular docking approaches to reveal the synergistic mechanism of multiple components in Venenum Bufonis for ameliorating heart failureWei Ren0Zhiqiang Luo1Fulu Pan2Jiali Liu3Qin Sun4Gang Luo5Raoqiong Wang6Haiyu Zhao7Baolin Bian8Xiao Xiao9Qingrong Pu10Sijin Yang11Guohua Yu12National Traditional Chinese Medicine Clinical Research Base, Affiliated Traditional Chinese Medicine Hospital, Southwest Medical University, Luzhou, ChinaSchool of Life Sciences, Beijing University of Chinese Medicine, Beijing, ChinaSchool of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing, ChinaNational Traditional Chinese Medicine Clinical Research Base, Affiliated Traditional Chinese Medicine Hospital, Southwest Medical University, Luzhou, ChinaNational Traditional Chinese Medicine Clinical Research Base, Affiliated Traditional Chinese Medicine Hospital, Southwest Medical University, Luzhou, ChinaNational Traditional Chinese Medicine Clinical Research Base, Affiliated Traditional Chinese Medicine Hospital, Southwest Medical University, Luzhou, ChinaNational Traditional Chinese Medicine Clinical Research Base, Affiliated Traditional Chinese Medicine Hospital, Southwest Medical University, Luzhou, ChinaInstitute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, ChinaInstitute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, ChinaBeijing National Laboratory for Molecular Sciences, Key Laboratory of Analytical Chemistry for Living Biosystems, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, ChinaNational Traditional Chinese Medicine Clinical Research Base, Affiliated Traditional Chinese Medicine Hospital, Southwest Medical University, Luzhou, ChinaNational Traditional Chinese Medicine Clinical Research Base, Affiliated Traditional Chinese Medicine Hospital, Southwest Medical University, Luzhou, ChinaSchool of Life Sciences, Beijing University of Chinese Medicine, Beijing, ChinaVenenum Bufonis (VB), also called Chan Su in China, has been extensively used as a traditional Chinese medicine (TCM) for treating heart failure (HF) since ancient time. However, the active components and the potential anti-HF mechanism of VB remain unclear. In the current study, the major absorbed components and metabolites of VB after oral administration in rats were first collected from literatures. A total of 17 prototypes and 25 metabolites were gathered. Next, a feasible network-based pharmacological approach was developed and employed to explore the therapeutic mechanism of VB on HF based on the collected constituents. In total, 158 main targets were screened out and considered as effective players in ameliorating HF. Then, the VB components–main HF putative targets–main pathways network was established, clarifying the underlying biological process of VB on HF. More importantly, the main hubs were found to be highly enriched in adrenergic signalling in cardio-myocytes. After verified by molecular docking studies, four key targets (ATP1A1, GNAS, MAPK1 and PRKCA) and three potential active leading compounds (bufotalin, cinobufaginol and 19-oxo-bufalin) were identified, which may play critical roles in cardiac muscle contraction. This study demonstrated that the integrated strategy based on network pharmacology and molecular docking was helpful to uncover the synergistic mechanism of multiple constituents in TCM.https://peerj.com/articles/10107.pdfVenenum BufonisHeart failureNetwork pharmacologyMolecular docking |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Wei Ren Zhiqiang Luo Fulu Pan Jiali Liu Qin Sun Gang Luo Raoqiong Wang Haiyu Zhao Baolin Bian Xiao Xiao Qingrong Pu Sijin Yang Guohua Yu |
spellingShingle |
Wei Ren Zhiqiang Luo Fulu Pan Jiali Liu Qin Sun Gang Luo Raoqiong Wang Haiyu Zhao Baolin Bian Xiao Xiao Qingrong Pu Sijin Yang Guohua Yu Integrated network pharmacology and molecular docking approaches to reveal the synergistic mechanism of multiple components in Venenum Bufonis for ameliorating heart failure PeerJ Venenum Bufonis Heart failure Network pharmacology Molecular docking |
author_facet |
Wei Ren Zhiqiang Luo Fulu Pan Jiali Liu Qin Sun Gang Luo Raoqiong Wang Haiyu Zhao Baolin Bian Xiao Xiao Qingrong Pu Sijin Yang Guohua Yu |
author_sort |
Wei Ren |
title |
Integrated network pharmacology and molecular docking approaches to reveal the synergistic mechanism of multiple components in Venenum Bufonis for ameliorating heart failure |
title_short |
Integrated network pharmacology and molecular docking approaches to reveal the synergistic mechanism of multiple components in Venenum Bufonis for ameliorating heart failure |
title_full |
Integrated network pharmacology and molecular docking approaches to reveal the synergistic mechanism of multiple components in Venenum Bufonis for ameliorating heart failure |
title_fullStr |
Integrated network pharmacology and molecular docking approaches to reveal the synergistic mechanism of multiple components in Venenum Bufonis for ameliorating heart failure |
title_full_unstemmed |
Integrated network pharmacology and molecular docking approaches to reveal the synergistic mechanism of multiple components in Venenum Bufonis for ameliorating heart failure |
title_sort |
integrated network pharmacology and molecular docking approaches to reveal the synergistic mechanism of multiple components in venenum bufonis for ameliorating heart failure |
publisher |
PeerJ Inc. |
series |
PeerJ |
issn |
2167-8359 |
publishDate |
2020-10-01 |
description |
Venenum Bufonis (VB), also called Chan Su in China, has been extensively used as a traditional Chinese medicine (TCM) for treating heart failure (HF) since ancient time. However, the active components and the potential anti-HF mechanism of VB remain unclear. In the current study, the major absorbed components and metabolites of VB after oral administration in rats were first collected from literatures. A total of 17 prototypes and 25 metabolites were gathered. Next, a feasible network-based pharmacological approach was developed and employed to explore the therapeutic mechanism of VB on HF based on the collected constituents. In total, 158 main targets were screened out and considered as effective players in ameliorating HF. Then, the VB components–main HF putative targets–main pathways network was established, clarifying the underlying biological process of VB on HF. More importantly, the main hubs were found to be highly enriched in adrenergic signalling in cardio-myocytes. After verified by molecular docking studies, four key targets (ATP1A1, GNAS, MAPK1 and PRKCA) and three potential active leading compounds (bufotalin, cinobufaginol and 19-oxo-bufalin) were identified, which may play critical roles in cardiac muscle contraction. This study demonstrated that the integrated strategy based on network pharmacology and molecular docking was helpful to uncover the synergistic mechanism of multiple constituents in TCM. |
topic |
Venenum Bufonis Heart failure Network pharmacology Molecular docking |
url |
https://peerj.com/articles/10107.pdf |
work_keys_str_mv |
AT weiren integratednetworkpharmacologyandmoleculardockingapproachestorevealthesynergisticmechanismofmultiplecomponentsinvenenumbufonisforamelioratingheartfailure AT zhiqiangluo integratednetworkpharmacologyandmoleculardockingapproachestorevealthesynergisticmechanismofmultiplecomponentsinvenenumbufonisforamelioratingheartfailure AT fulupan integratednetworkpharmacologyandmoleculardockingapproachestorevealthesynergisticmechanismofmultiplecomponentsinvenenumbufonisforamelioratingheartfailure AT jialiliu integratednetworkpharmacologyandmoleculardockingapproachestorevealthesynergisticmechanismofmultiplecomponentsinvenenumbufonisforamelioratingheartfailure AT qinsun integratednetworkpharmacologyandmoleculardockingapproachestorevealthesynergisticmechanismofmultiplecomponentsinvenenumbufonisforamelioratingheartfailure AT gangluo integratednetworkpharmacologyandmoleculardockingapproachestorevealthesynergisticmechanismofmultiplecomponentsinvenenumbufonisforamelioratingheartfailure AT raoqiongwang integratednetworkpharmacologyandmoleculardockingapproachestorevealthesynergisticmechanismofmultiplecomponentsinvenenumbufonisforamelioratingheartfailure AT haiyuzhao integratednetworkpharmacologyandmoleculardockingapproachestorevealthesynergisticmechanismofmultiplecomponentsinvenenumbufonisforamelioratingheartfailure AT baolinbian integratednetworkpharmacologyandmoleculardockingapproachestorevealthesynergisticmechanismofmultiplecomponentsinvenenumbufonisforamelioratingheartfailure AT xiaoxiao integratednetworkpharmacologyandmoleculardockingapproachestorevealthesynergisticmechanismofmultiplecomponentsinvenenumbufonisforamelioratingheartfailure AT qingrongpu integratednetworkpharmacologyandmoleculardockingapproachestorevealthesynergisticmechanismofmultiplecomponentsinvenenumbufonisforamelioratingheartfailure AT sijinyang integratednetworkpharmacologyandmoleculardockingapproachestorevealthesynergisticmechanismofmultiplecomponentsinvenenumbufonisforamelioratingheartfailure AT guohuayu integratednetworkpharmacologyandmoleculardockingapproachestorevealthesynergisticmechanismofmultiplecomponentsinvenenumbufonisforamelioratingheartfailure |
_version_ |
1724529978319568896 |