Genome sequencing and annotation of Afipia septicemium strain OHSU_II

Genome sequencing and annotation of Afipia septicemium strain OHSU_II

We report the 5.1 Mb noncontiguous draft genome of Afipia septicemium strain OHSU_II, isolated from blood of a female patient. The genome consists of 5,087,893 bp circular chromosome with no identifiable autonomous plasmid with a G + C content of 61.09% and contains 4898 protein-coding genes and 49...

Full description

Bibliographic Details
Main Authors: Philip Yang, Guo-Chiuan Hung, Haiyan Lei, Tianwei Li, Bingjie Li, Shien Tsai, Shyh-Ching Lo
Format: Article
Language:English
Published: Elsevier 2014-12-01
Series:Genomics Data
Subjects:
Afipia septicemium
Whole genome
Illumina-MiSeq
CLC bio Genomics Workbench version 6.0
Rapid Annotations using Subsystems Technology (RAST)
Online Access:http://www.sciencedirect.com/science/article/pii/S2213596014000336
id doaj-86c9525a7d044a378345956264470f5e
record_format Article
spelling doaj-86c9525a7d044a378345956264470f5e2020-11-25T01:43:59ZengElsevierGenomics Data2213-59602014-12-012C12312610.1016/j.gdata.2014.06.001Genome sequencing and annotation of Afipia septicemium strain OHSU_IIPhilip YangGuo-Chiuan HungHaiyan LeiTianwei LiBingjie LiShien TsaiShyh-Ching LoWe report the 5.1 Mb noncontiguous draft genome of Afipia septicemium strain OHSU_II, isolated from blood of a female patient. The genome consists of 5,087,893 bp circular chromosome with no identifiable autonomous plasmid with a G + C content of 61.09% and contains 4898 protein-coding genes and 49 RNA genes including 3 rRNA genes and 46 tRNA genes.http://www.sciencedirect.com/science/article/pii/S2213596014000336Afipia septicemiumWhole genomeIllumina-MiSeqCLC bio Genomics Workbench version 6.0Rapid Annotations using Subsystems Technology (RAST)
collection DOAJ
language English
format Article
sources DOAJ
author Philip Yang
Guo-Chiuan Hung
Haiyan Lei
Tianwei Li
Bingjie Li
Shien Tsai
Shyh-Ching Lo
spellingShingle Philip Yang
Guo-Chiuan Hung
Haiyan Lei
Tianwei Li
Bingjie Li
Shien Tsai
Shyh-Ching Lo
Genome sequencing and annotation of Afipia septicemium strain OHSU_II
Genomics Data
Afipia septicemium
Whole genome
Illumina-MiSeq
CLC bio Genomics Workbench version 6.0
Rapid Annotations using Subsystems Technology (RAST)
author_facet Philip Yang
Guo-Chiuan Hung
Haiyan Lei
Tianwei Li
Bingjie Li
Shien Tsai
Shyh-Ching Lo
author_sort Philip Yang
title Genome sequencing and annotation of Afipia septicemium strain OHSU_II
title_short Genome sequencing and annotation of Afipia septicemium strain OHSU_II
title_full Genome sequencing and annotation of Afipia septicemium strain OHSU_II
title_fullStr Genome sequencing and annotation of Afipia septicemium strain OHSU_II
title_full_unstemmed Genome sequencing and annotation of Afipia septicemium strain OHSU_II
title_sort genome sequencing and annotation of afipia septicemium strain ohsu_ii
publisher Elsevier
series Genomics Data
issn 2213-5960
publishDate 2014-12-01
description We report the 5.1 Mb noncontiguous draft genome of Afipia septicemium strain OHSU_II, isolated from blood of a female patient. The genome consists of 5,087,893 bp circular chromosome with no identifiable autonomous plasmid with a G + C content of 61.09% and contains 4898 protein-coding genes and 49 RNA genes including 3 rRNA genes and 46 tRNA genes.
topic Afipia septicemium
Whole genome
Illumina-MiSeq
CLC bio Genomics Workbench version 6.0
Rapid Annotations using Subsystems Technology (RAST)
url http://www.sciencedirect.com/science/article/pii/S2213596014000336
work_keys_str_mv AT philipyang genomesequencingandannotationofafipiasepticemiumstrainohsuii
AT guochiuanhung genomesequencingandannotationofafipiasepticemiumstrainohsuii
AT haiyanlei genomesequencingandannotationofafipiasepticemiumstrainohsuii
AT tianweili genomesequencingandannotationofafipiasepticemiumstrainohsuii
AT bingjieli genomesequencingandannotationofafipiasepticemiumstrainohsuii
AT shientsai genomesequencingandannotationofafipiasepticemiumstrainohsuii
AT shyhchinglo genomesequencingandannotationofafipiasepticemiumstrainohsuii
_version_ 1725030441703964672

Similar Items