Interplay between chromosomal alterations and gene mutations shapes the evolutionary trajectory of clonal hematopoiesis

Patients with solid cancers have high rates of clonal haematopoiesis associated with increased risk of secondary leukemias. Here, by using peripheral blood sequencing data from patients with solid non-hematologic cancer, the authors profile the landscape of mosaic chromosomal alterations and gene mu...

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Main Authors: Teng Gao, Ryan Ptashkin, Kelly L. Bolton, Maria Sirenko, Christopher Fong, Barbara Spitzer, Kamal Menghrajani, Juan E. Arango Ossa, Yangyu Zhou, Elsa Bernard, Max Levine, Juan S. Medina Martinez, Yanming Zhang, Sebastià Franch-Expósito, Minal Patel, Lior Z. Braunstein, Daniel Kelly, Mariko Yabe, Ryma Benayed, Nicole M. Caltabellotta, John Philip, Ederlinda Paraiso, Simon Mantha, David B. Solit, Luis A. Diaz, Michael F. Berger, Virginia Klimek, Ross L. Levine, Ahmet Zehir, Sean M. Devlin, Elli Papaemmanuil
Format: Article
Language:English
Published: Nature Publishing Group 2021-01-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-020-20565-7
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author Teng Gao
Ryan Ptashkin
Kelly L. Bolton
Maria Sirenko
Christopher Fong
Barbara Spitzer
Kamal Menghrajani
Juan E. Arango Ossa
Yangyu Zhou
Elsa Bernard
Max Levine
Juan S. Medina Martinez
Yanming Zhang
Sebastià Franch-Expósito
Minal Patel
Lior Z. Braunstein
Daniel Kelly
Mariko Yabe
Ryma Benayed
Nicole M. Caltabellotta
John Philip
Ederlinda Paraiso
Simon Mantha
David B. Solit
Luis A. Diaz
Michael F. Berger
Virginia Klimek
Ross L. Levine
Ahmet Zehir
Sean M. Devlin
Elli Papaemmanuil
spellingShingle Teng Gao
Ryan Ptashkin
Kelly L. Bolton
Maria Sirenko
Christopher Fong
Barbara Spitzer
Kamal Menghrajani
Juan E. Arango Ossa
Yangyu Zhou
Elsa Bernard
Max Levine
Juan S. Medina Martinez
Yanming Zhang
Sebastià Franch-Expósito
Minal Patel
Lior Z. Braunstein
Daniel Kelly
Mariko Yabe
Ryma Benayed
Nicole M. Caltabellotta
John Philip
Ederlinda Paraiso
Simon Mantha
David B. Solit
Luis A. Diaz
Michael F. Berger
Virginia Klimek
Ross L. Levine
Ahmet Zehir
Sean M. Devlin
Elli Papaemmanuil
Interplay between chromosomal alterations and gene mutations shapes the evolutionary trajectory of clonal hematopoiesis
Nature Communications
author_facet Teng Gao
Ryan Ptashkin
Kelly L. Bolton
Maria Sirenko
Christopher Fong
Barbara Spitzer
Kamal Menghrajani
Juan E. Arango Ossa
Yangyu Zhou
Elsa Bernard
Max Levine
Juan S. Medina Martinez
Yanming Zhang
Sebastià Franch-Expósito
Minal Patel
Lior Z. Braunstein
Daniel Kelly
Mariko Yabe
Ryma Benayed
Nicole M. Caltabellotta
John Philip
Ederlinda Paraiso
Simon Mantha
David B. Solit
Luis A. Diaz
Michael F. Berger
Virginia Klimek
Ross L. Levine
Ahmet Zehir
Sean M. Devlin
Elli Papaemmanuil
author_sort Teng Gao
title Interplay between chromosomal alterations and gene mutations shapes the evolutionary trajectory of clonal hematopoiesis
title_short Interplay between chromosomal alterations and gene mutations shapes the evolutionary trajectory of clonal hematopoiesis
title_full Interplay between chromosomal alterations and gene mutations shapes the evolutionary trajectory of clonal hematopoiesis
title_fullStr Interplay between chromosomal alterations and gene mutations shapes the evolutionary trajectory of clonal hematopoiesis
title_full_unstemmed Interplay between chromosomal alterations and gene mutations shapes the evolutionary trajectory of clonal hematopoiesis
title_sort interplay between chromosomal alterations and gene mutations shapes the evolutionary trajectory of clonal hematopoiesis
publisher Nature Publishing Group
series Nature Communications
issn 2041-1723
publishDate 2021-01-01
description Patients with solid cancers have high rates of clonal haematopoiesis associated with increased risk of secondary leukemias. Here, by using peripheral blood sequencing data from patients with solid non-hematologic cancer, the authors profile the landscape of mosaic chromosomal alterations and gene mutations, defining patients at high risk of leukemia progression.
url https://doi.org/10.1038/s41467-020-20565-7
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spelling doaj-86f1527efcbe4a8c928f5380279e47562021-01-17T12:13:39ZengNature Publishing GroupNature Communications2041-17232021-01-0112111110.1038/s41467-020-20565-7Interplay between chromosomal alterations and gene mutations shapes the evolutionary trajectory of clonal hematopoiesisTeng Gao0Ryan Ptashkin1Kelly L. Bolton2Maria Sirenko3Christopher Fong4Barbara Spitzer5Kamal Menghrajani6Juan E. Arango Ossa7Yangyu Zhou8Elsa Bernard9Max Levine10Juan S. Medina Martinez11Yanming Zhang12Sebastià Franch-Expósito13Minal Patel14Lior Z. Braunstein15Daniel Kelly16Mariko Yabe17Ryma Benayed18Nicole M. Caltabellotta19John Philip20Ederlinda Paraiso21Simon Mantha22David B. Solit23Luis A. Diaz24Michael F. Berger25Virginia Klimek26Ross L. Levine27Ahmet Zehir28Sean M. Devlin29Elli Papaemmanuil30Computational Oncology Service, Department of Epidemiology & Biostatistics, Center for Computational Oncology, Memorial Sloan Kettering Cancer CenterDepartment of Pathology, Memorial Sloan Kettering Cancer CenterDepartment of Medicine, Leukemia Service, Memorial Sloan Kettering Cancer CenterComputational Oncology Service, Department of Epidemiology & Biostatistics, Center for Computational Oncology, Memorial Sloan Kettering Cancer CenterComputational Oncology Service, Department of Epidemiology & Biostatistics, Center for Computational Oncology, Memorial Sloan Kettering Cancer CenterDepartment of Pediatrics, Memorial Sloan Kettering Cancer CenterDepartment of Medicine, Leukemia Service, Memorial Sloan Kettering Cancer CenterComputational Oncology Service, Department of Epidemiology & Biostatistics, Center for Computational Oncology, Memorial Sloan Kettering Cancer CenterComputational Oncology Service, Department of Epidemiology & Biostatistics, Center for Computational Oncology, Memorial Sloan Kettering Cancer CenterComputational Oncology Service, Department of Epidemiology & Biostatistics, Center for Computational Oncology, Memorial Sloan Kettering Cancer CenterComputational Oncology Service, Department of Epidemiology & Biostatistics, Center for Computational Oncology, Memorial Sloan Kettering Cancer CenterComputational Oncology Service, Department of Epidemiology & Biostatistics, Center for Computational Oncology, Memorial Sloan Kettering Cancer CenterDepartment of Pathology, Cytogenetics Laboratory, Memorial Sloan Kettering Cancer CenterDepartment of Pathology, Memorial Sloan Kettering Cancer CenterCenter for Hematologic Malignancies, Memorial Sloan Kettering Cancer CenterDepartment of Radiation Oncology, Memorial Sloan Kettering Cancer CenterDepartment of Information Systems, Memorial Sloan Kettering Cancer CenterDepartment of Pathology, Memorial Sloan Kettering Cancer CenterDepartment of Pathology, Memorial Sloan Kettering Cancer CenterCenter for Hematologic Malignancies, Memorial Sloan Kettering Cancer CenterDepartment of Health Informatics, Memorial Sloan Kettering Cancer CenterCenter for Strategy & Innovation, Memorial Sloan Kettering Cancer CenterDepartment of Medicine, Hematology Service, Memorial Sloan Kettering Cancer CenterHuman Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer CenterDepartment of Medicine, Memorial Sloan Kettering Cancer CenterDepartment of Pathology, Memorial Sloan Kettering Cancer CenterDepartment of Medicine, Hematology Service, Memorial Sloan Kettering Cancer CenterCenter for Hematologic Malignancies, Memorial Sloan Kettering Cancer CenterDepartment of Pathology, Memorial Sloan Kettering Cancer CenterDepartment of Epidemiology & Biostatistics, Memorial Sloan Kettering Cancer CenterComputational Oncology Service, Department of Epidemiology & Biostatistics, Center for Computational Oncology, Memorial Sloan Kettering Cancer CenterPatients with solid cancers have high rates of clonal haematopoiesis associated with increased risk of secondary leukemias. Here, by using peripheral blood sequencing data from patients with solid non-hematologic cancer, the authors profile the landscape of mosaic chromosomal alterations and gene mutations, defining patients at high risk of leukemia progression.https://doi.org/10.1038/s41467-020-20565-7