Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer

Abstract Although artificial intelligence algorithms are often developed and applied for narrow tasks, their implementation in other medical settings could help to improve patient care. Here we assess whether a deep-learning system for volumetric heart segmentation on computed tomography (CT) scans...

Full description

Bibliographic Details
Main Authors: Roman Zeleznik, Jakob Weiss, Jana Taron, Christian Guthier, Danielle S. Bitterman, Cindy Hancox, Benjamin H. Kann, Daniel W. Kim, Rinaa S. Punglia, Jeremy Bredfeldt, Borek Foldyna, Parastou Eslami, Michael T. Lu, Udo Hoffmann, Raymond Mak, Hugo J. W. L. Aerts
Format: Article
Language:English
Published: Nature Publishing Group 2021-03-01
Series:npj Digital Medicine
Online Access:https://doi.org/10.1038/s41746-021-00416-5
id doaj-8becf93bb4f941d09c80914e23c4335a
record_format Article
collection DOAJ
language English
format Article
sources DOAJ
author Roman Zeleznik
Jakob Weiss
Jana Taron
Christian Guthier
Danielle S. Bitterman
Cindy Hancox
Benjamin H. Kann
Daniel W. Kim
Rinaa S. Punglia
Jeremy Bredfeldt
Borek Foldyna
Parastou Eslami
Michael T. Lu
Udo Hoffmann
Raymond Mak
Hugo J. W. L. Aerts
spellingShingle Roman Zeleznik
Jakob Weiss
Jana Taron
Christian Guthier
Danielle S. Bitterman
Cindy Hancox
Benjamin H. Kann
Daniel W. Kim
Rinaa S. Punglia
Jeremy Bredfeldt
Borek Foldyna
Parastou Eslami
Michael T. Lu
Udo Hoffmann
Raymond Mak
Hugo J. W. L. Aerts
Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer
npj Digital Medicine
author_facet Roman Zeleznik
Jakob Weiss
Jana Taron
Christian Guthier
Danielle S. Bitterman
Cindy Hancox
Benjamin H. Kann
Daniel W. Kim
Rinaa S. Punglia
Jeremy Bredfeldt
Borek Foldyna
Parastou Eslami
Michael T. Lu
Udo Hoffmann
Raymond Mak
Hugo J. W. L. Aerts
author_sort Roman Zeleznik
title Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer
title_short Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer
title_full Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer
title_fullStr Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer
title_full_unstemmed Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer
title_sort deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer
publisher Nature Publishing Group
series npj Digital Medicine
issn 2398-6352
publishDate 2021-03-01
description Abstract Although artificial intelligence algorithms are often developed and applied for narrow tasks, their implementation in other medical settings could help to improve patient care. Here we assess whether a deep-learning system for volumetric heart segmentation on computed tomography (CT) scans developed in cardiovascular radiology can optimize treatment planning in radiation oncology. The system was trained using multi-center data (n = 858) with manual heart segmentations provided by cardiovascular radiologists. Validation of the system was performed in an independent real-world dataset of 5677 breast cancer patients treated with radiation therapy at the Dana-Farber/Brigham and Women’s Cancer Center between 2008–2018. In a subset of 20 patients, the performance of the system was compared to eight radiation oncology experts by assessing segmentation time, agreement between experts, and accuracy with and without deep-learning assistance. To compare the performance to segmentations used in the clinic, concordance and failures (defined as Dice < 0.85) of the system were evaluated in the entire dataset. The system was successfully applied without retraining. With deep-learning assistance, segmentation time significantly decreased (4.0 min [IQR 3.1–5.0] vs. 2.0 min [IQR 1.3–3.5]; p < 0.001), and agreement increased (Dice 0.95 [IQR = 0.02]; vs. 0.97 [IQR = 0.02], p < 0.001). Expert accuracy was similar with and without deep-learning assistance (Dice 0.92 [IQR = 0.02] vs. 0.92 [IQR = 0.02]; p = 0.48), and not significantly different from deep-learning-only segmentations (Dice 0.92 [IQR = 0.02]; p ≥ 0.1). In comparison to real-world data, the system showed high concordance (Dice 0.89 [IQR = 0.06]) across 5677 patients and a significantly lower failure rate (p < 0.001). These results suggest that deep-learning algorithms can successfully be applied across medical specialties and improve clinical care beyond the original field of interest.
url https://doi.org/10.1038/s41746-021-00416-5
work_keys_str_mv AT romanzeleznik deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT jakobweiss deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT janataron deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT christianguthier deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT daniellesbitterman deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT cindyhancox deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT benjaminhkann deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT danielwkim deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT rinaaspunglia deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT jeremybredfeldt deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT borekfoldyna deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT parastoueslami deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT michaeltlu deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT udohoffmann deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT raymondmak deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
AT hugojwlaerts deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer
_version_ 1724224161998438400
spelling doaj-8becf93bb4f941d09c80914e23c4335a2021-03-11T12:39:59ZengNature Publishing Groupnpj Digital Medicine2398-63522021-03-01411710.1038/s41746-021-00416-5Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancerRoman Zeleznik0Jakob Weiss1Jana Taron2Christian Guthier3Danielle S. Bitterman4Cindy Hancox5Benjamin H. Kann6Daniel W. Kim7Rinaa S. Punglia8Jeremy Bredfeldt9Borek Foldyna10Parastou Eslami11Michael T. Lu12Udo Hoffmann13Raymond Mak14Hugo J. W. L. Aerts15Artificial Intelligence in Medicine (AIM) Program, Brigham and Women’s Hospital, Harvard Medical SchoolArtificial Intelligence in Medicine (AIM) Program, Brigham and Women’s Hospital, Harvard Medical SchoolCardiovascular Imaging Research Center, Massachusetts General Hospital, Harvard Medical SchoolDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Brigham and Women’s Hospital, Harvard Medical SchoolDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Brigham and Women’s Hospital, Harvard Medical SchoolDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Brigham and Women’s Hospital, Harvard Medical SchoolArtificial Intelligence in Medicine (AIM) Program, Brigham and Women’s Hospital, Harvard Medical SchoolDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Brigham and Women’s Hospital, Harvard Medical SchoolDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Brigham and Women’s Hospital, Harvard Medical SchoolDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Brigham and Women’s Hospital, Harvard Medical SchoolArtificial Intelligence in Medicine (AIM) Program, Brigham and Women’s Hospital, Harvard Medical SchoolCardiovascular Imaging Research Center, Massachusetts General Hospital, Harvard Medical SchoolCardiovascular Imaging Research Center, Massachusetts General Hospital, Harvard Medical SchoolArtificial Intelligence in Medicine (AIM) Program, Brigham and Women’s Hospital, Harvard Medical SchoolDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Brigham and Women’s Hospital, Harvard Medical SchoolArtificial Intelligence in Medicine (AIM) Program, Brigham and Women’s Hospital, Harvard Medical SchoolAbstract Although artificial intelligence algorithms are often developed and applied for narrow tasks, their implementation in other medical settings could help to improve patient care. Here we assess whether a deep-learning system for volumetric heart segmentation on computed tomography (CT) scans developed in cardiovascular radiology can optimize treatment planning in radiation oncology. The system was trained using multi-center data (n = 858) with manual heart segmentations provided by cardiovascular radiologists. Validation of the system was performed in an independent real-world dataset of 5677 breast cancer patients treated with radiation therapy at the Dana-Farber/Brigham and Women’s Cancer Center between 2008–2018. In a subset of 20 patients, the performance of the system was compared to eight radiation oncology experts by assessing segmentation time, agreement between experts, and accuracy with and without deep-learning assistance. To compare the performance to segmentations used in the clinic, concordance and failures (defined as Dice < 0.85) of the system were evaluated in the entire dataset. The system was successfully applied without retraining. With deep-learning assistance, segmentation time significantly decreased (4.0 min [IQR 3.1–5.0] vs. 2.0 min [IQR 1.3–3.5]; p < 0.001), and agreement increased (Dice 0.95 [IQR = 0.02]; vs. 0.97 [IQR = 0.02], p < 0.001). Expert accuracy was similar with and without deep-learning assistance (Dice 0.92 [IQR = 0.02] vs. 0.92 [IQR = 0.02]; p = 0.48), and not significantly different from deep-learning-only segmentations (Dice 0.92 [IQR = 0.02]; p ≥ 0.1). In comparison to real-world data, the system showed high concordance (Dice 0.89 [IQR = 0.06]) across 5677 patients and a significantly lower failure rate (p < 0.001). These results suggest that deep-learning algorithms can successfully be applied across medical specialties and improve clinical care beyond the original field of interest.https://doi.org/10.1038/s41746-021-00416-5