Tissue- and Sex-Specific DNA Methylation Changes in Mice Perinatally Exposed to Lead (Pb)

Lead (Pb) is a well-known toxicant that interferes with the development of a child’s nervous and metabolic systems and increases the risk of developing diseases later in life. Although studies have investigated epigenetic effects associated with Pb exposure, knowledge of genome-wide changes with in...

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Main Authors: Kai Wang, Siyu Liu, Laurie K. Svoboda, Christine A. Rygiel, Kari Neier, Tamara R. Jones, Justin A. Colacino, Dana C. Dolinoy, Maureen A. Sartor
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-08-01
Series:Frontiers in Genetics
Subjects:
sex
Online Access:https://www.frontiersin.org/article/10.3389/fgene.2020.00840/full
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spelling doaj-8cacfd453a854541a3d19c94939a77582020-11-25T03:55:12ZengFrontiers Media S.A.Frontiers in Genetics1664-80212020-08-011110.3389/fgene.2020.00840551282Tissue- and Sex-Specific DNA Methylation Changes in Mice Perinatally Exposed to Lead (Pb)Kai Wang0Siyu Liu1Laurie K. Svoboda2Christine A. Rygiel3Kari Neier4Tamara R. Jones5Justin A. Colacino6Dana C. Dolinoy7Maureen A. Sartor8Maureen A. Sartor9Department of Computational Medicine and Bioinformatics, School of Medicine, University of Michigan, Ann Arbor, MI, United StatesDepartment of Computational Medicine and Bioinformatics, School of Medicine, University of Michigan, Ann Arbor, MI, United StatesDepartment of Environmental Health Sciences, School of Public Health, University of Michigan, Ann Arbor, MI, United StatesDepartment of Environmental Health Sciences, School of Public Health, University of Michigan, Ann Arbor, MI, United StatesDepartment of Environmental Health Sciences, School of Public Health, University of Michigan, Ann Arbor, MI, United StatesDepartment of Environmental Health Sciences, School of Public Health, University of Michigan, Ann Arbor, MI, United StatesDepartment of Environmental Health Sciences, School of Public Health, University of Michigan, Ann Arbor, MI, United StatesDepartment of Environmental Health Sciences, School of Public Health, University of Michigan, Ann Arbor, MI, United StatesDepartment of Computational Medicine and Bioinformatics, School of Medicine, University of Michigan, Ann Arbor, MI, United StatesDepartment of Biostatistics, School of Public Health, University of Michigan, Ann Arbor, MI, United StatesLead (Pb) is a well-known toxicant that interferes with the development of a child’s nervous and metabolic systems and increases the risk of developing diseases later in life. Although studies have investigated epigenetic effects associated with Pb exposure, knowledge of genome-wide changes with in vivo low dose perinatal Pb exposure in multiple tissues is limited. Within the Toxicant Exposures and Responses by Genomic and Epigenomic Regulators of Transcription (TaRGET II) consortium, we utilized a mouse model to investigate tissue- and sex-specific DNA methylation. Dams were assigned to control or Pb-acetate water, respectively. Exposures started 2 weeks prior to mating and continued until weaning at post-natal day 21 (PND21). Liver and blood were collected from PND21 mice, and the DNA methylome was assessed using enhanced reduced representation bisulfite sequencing (ERRBS). We identified ∼1000 perinatal Pb exposure related differentially methylated cytosines (DMCs) for each tissue- and sex-specific comparison, and hundreds of tissue- and sex-specific differentially methylated regions (DMRs). Several mouse imprinted genes were differentially methylated across both tissues in males and females. Overall, our findings demonstrate that perinatal Pb exposure can induce tissue- and sex-specific DNA methylation changes and provide information for future Pb studies in humans.https://www.frontiersin.org/article/10.3389/fgene.2020.00840/fullDNA methylationlead exposureERRBStissuesex
collection DOAJ
language English
format Article
sources DOAJ
author Kai Wang
Siyu Liu
Laurie K. Svoboda
Christine A. Rygiel
Kari Neier
Tamara R. Jones
Justin A. Colacino
Dana C. Dolinoy
Maureen A. Sartor
Maureen A. Sartor
spellingShingle Kai Wang
Siyu Liu
Laurie K. Svoboda
Christine A. Rygiel
Kari Neier
Tamara R. Jones
Justin A. Colacino
Dana C. Dolinoy
Maureen A. Sartor
Maureen A. Sartor
Tissue- and Sex-Specific DNA Methylation Changes in Mice Perinatally Exposed to Lead (Pb)
Frontiers in Genetics
DNA methylation
lead exposure
ERRBS
tissue
sex
author_facet Kai Wang
Siyu Liu
Laurie K. Svoboda
Christine A. Rygiel
Kari Neier
Tamara R. Jones
Justin A. Colacino
Dana C. Dolinoy
Maureen A. Sartor
Maureen A. Sartor
author_sort Kai Wang
title Tissue- and Sex-Specific DNA Methylation Changes in Mice Perinatally Exposed to Lead (Pb)
title_short Tissue- and Sex-Specific DNA Methylation Changes in Mice Perinatally Exposed to Lead (Pb)
title_full Tissue- and Sex-Specific DNA Methylation Changes in Mice Perinatally Exposed to Lead (Pb)
title_fullStr Tissue- and Sex-Specific DNA Methylation Changes in Mice Perinatally Exposed to Lead (Pb)
title_full_unstemmed Tissue- and Sex-Specific DNA Methylation Changes in Mice Perinatally Exposed to Lead (Pb)
title_sort tissue- and sex-specific dna methylation changes in mice perinatally exposed to lead (pb)
publisher Frontiers Media S.A.
series Frontiers in Genetics
issn 1664-8021
publishDate 2020-08-01
description Lead (Pb) is a well-known toxicant that interferes with the development of a child’s nervous and metabolic systems and increases the risk of developing diseases later in life. Although studies have investigated epigenetic effects associated with Pb exposure, knowledge of genome-wide changes with in vivo low dose perinatal Pb exposure in multiple tissues is limited. Within the Toxicant Exposures and Responses by Genomic and Epigenomic Regulators of Transcription (TaRGET II) consortium, we utilized a mouse model to investigate tissue- and sex-specific DNA methylation. Dams were assigned to control or Pb-acetate water, respectively. Exposures started 2 weeks prior to mating and continued until weaning at post-natal day 21 (PND21). Liver and blood were collected from PND21 mice, and the DNA methylome was assessed using enhanced reduced representation bisulfite sequencing (ERRBS). We identified ∼1000 perinatal Pb exposure related differentially methylated cytosines (DMCs) for each tissue- and sex-specific comparison, and hundreds of tissue- and sex-specific differentially methylated regions (DMRs). Several mouse imprinted genes were differentially methylated across both tissues in males and females. Overall, our findings demonstrate that perinatal Pb exposure can induce tissue- and sex-specific DNA methylation changes and provide information for future Pb studies in humans.
topic DNA methylation
lead exposure
ERRBS
tissue
sex
url https://www.frontiersin.org/article/10.3389/fgene.2020.00840/full
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