Detection of Acinetobacter spp. in Blood Cultures by an Improved Fluorescent in Situ Hybridization Assay

Fluorescent in situ hybridization (FISH) allows rapid detection of microorganisms. We aimed (i) to evaluate the sensitivity and specificity of FISH for the detection of Acinetobacter spp. in blood culture specimens and (ii) to test the simultaneous application of two genus-specific probes labeled wi...

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Main Authors: Hanieh Asaadi, Behrouz Naeimi, Somayyeh Gharibi, Abdalnaser Khosravi, Sina Dobaradaran, Reza Taherkhani, Saeed Tajbakhsh
Format: Article
Language:English
Published: Exeley Inc. 2018-03-01
Series:Polish Journal of Microbiology
Subjects:
Online Access:https://www.exeley.com/exeley/journals/polish_journal_of_microbiology/67/1/pdf/10.5604_01.3001.0011.6137.pdf
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spelling doaj-8da24029ff7a46e6ba39dee64a63dc2e2020-11-24T22:16:06ZengExeley Inc.Polish Journal of Microbiology1733-13312544-46462018-03-0167110.5604/01.3001.0011.6137Detection of Acinetobacter spp. in Blood Cultures by an Improved Fluorescent in Situ Hybridization AssayHanieh Asaadi0Behrouz Naeimi1Somayyeh Gharibi2Abdalnaser Khosravi3Sina Dobaradaran4Reza Taherkhani5Saeed Tajbakhsh6Student Research Committee, Bushehr University of Medical Sciences,Bushehr,IranThe Persian Gulf Tropical Medicine Research Center, Bushehr University of Medical Sciences,Bushehr,IranDepartment of Microbiology, Faculty of Biological Sciences, Alzahra University,Tehran,IranDepartment of Microbiology and Parasitology, Faculty of Medicine, Bushehr University of Medical Sciences,Bushehr,IranDepartment of Environmental Health Engineering, Faculty of Health, Bushehr University of Medical Sciences,Bushehr,IranThe Persian Gulf Tropical Medicine Research Center, Bushehr University of Medical Sciences,Bushehr,IranThe Persian Gulf Tropical Medicine Research Center, Bushehr University of Medical Sciences,Bushehr,IranFluorescent in situ hybridization (FISH) allows rapid detection of microorganisms. We aimed (i) to evaluate the sensitivity and specificity of FISH for the detection of Acinetobacter spp. in blood culture specimens and (ii) to test the simultaneous application of two genus-specific probes labeled with the same fluorochrome to increase the fluorescent signal intensity and improve the detection of Acinetobacter spp. Three hundred and twenty blood culture specimens were tested via both the conventional laboratory methods and FISH to detect Acinetobacter spp. The specimens were examined separately with each genus-specific probe Aci and ACA, and also using a mixture of the both probes Aci and ACA. In all examinations, probe EUB338 was used accompanied by Aci and ACA. The specificity of FISH was 100% (97.5% confidence interval [CI] = 98.7% – 100%). The sensitivity of FISH by the use of probe Aci was 96.4% (95% CI = 81.7% – 99.9%), whereas, the sensitivity of this technique by the use of probe ACA as well as by the combination of both probes Aci and ACA was 100% (97.5% CI = 87.7% – 100%). Moreover, simultaneous hybridization by probes Aci and ACA increased the fluorescent signal of Acinetobacter spp. cells to 3+ in 13 specimens. In conclusion, FISH, particularly using a combination of Aci and ACA, is a highly accurate method for the detection of Acinetobacter spp. in blood cultures. Furthermore, simultaneous hybridization by the both probes Aci and ACA can increase the fluorescent signal intensity of Acinetobacter spp. cells in some blood culture specimens and facilitate the detection of these microorganisms.https://www.exeley.com/exeley/journals/polish_journal_of_microbiology/67/1/pdf/10.5604_01.3001.0011.6137.pdfAcinetobacterbacteremiablood cultureFISHsimultaneous hybridization
collection DOAJ
language English
format Article
sources DOAJ
author Hanieh Asaadi
Behrouz Naeimi
Somayyeh Gharibi
Abdalnaser Khosravi
Sina Dobaradaran
Reza Taherkhani
Saeed Tajbakhsh
spellingShingle Hanieh Asaadi
Behrouz Naeimi
Somayyeh Gharibi
Abdalnaser Khosravi
Sina Dobaradaran
Reza Taherkhani
Saeed Tajbakhsh
Detection of Acinetobacter spp. in Blood Cultures by an Improved Fluorescent in Situ Hybridization Assay
Polish Journal of Microbiology
Acinetobacter
bacteremia
blood culture
FISH
simultaneous hybridization
author_facet Hanieh Asaadi
Behrouz Naeimi
Somayyeh Gharibi
Abdalnaser Khosravi
Sina Dobaradaran
Reza Taherkhani
Saeed Tajbakhsh
author_sort Hanieh Asaadi
title Detection of Acinetobacter spp. in Blood Cultures by an Improved Fluorescent in Situ Hybridization Assay
title_short Detection of Acinetobacter spp. in Blood Cultures by an Improved Fluorescent in Situ Hybridization Assay
title_full Detection of Acinetobacter spp. in Blood Cultures by an Improved Fluorescent in Situ Hybridization Assay
title_fullStr Detection of Acinetobacter spp. in Blood Cultures by an Improved Fluorescent in Situ Hybridization Assay
title_full_unstemmed Detection of Acinetobacter spp. in Blood Cultures by an Improved Fluorescent in Situ Hybridization Assay
title_sort detection of acinetobacter spp. in blood cultures by an improved fluorescent in situ hybridization assay
publisher Exeley Inc.
series Polish Journal of Microbiology
issn 1733-1331
2544-4646
publishDate 2018-03-01
description Fluorescent in situ hybridization (FISH) allows rapid detection of microorganisms. We aimed (i) to evaluate the sensitivity and specificity of FISH for the detection of Acinetobacter spp. in blood culture specimens and (ii) to test the simultaneous application of two genus-specific probes labeled with the same fluorochrome to increase the fluorescent signal intensity and improve the detection of Acinetobacter spp. Three hundred and twenty blood culture specimens were tested via both the conventional laboratory methods and FISH to detect Acinetobacter spp. The specimens were examined separately with each genus-specific probe Aci and ACA, and also using a mixture of the both probes Aci and ACA. In all examinations, probe EUB338 was used accompanied by Aci and ACA. The specificity of FISH was 100% (97.5% confidence interval [CI] = 98.7% – 100%). The sensitivity of FISH by the use of probe Aci was 96.4% (95% CI = 81.7% – 99.9%), whereas, the sensitivity of this technique by the use of probe ACA as well as by the combination of both probes Aci and ACA was 100% (97.5% CI = 87.7% – 100%). Moreover, simultaneous hybridization by probes Aci and ACA increased the fluorescent signal of Acinetobacter spp. cells to 3+ in 13 specimens. In conclusion, FISH, particularly using a combination of Aci and ACA, is a highly accurate method for the detection of Acinetobacter spp. in blood cultures. Furthermore, simultaneous hybridization by the both probes Aci and ACA can increase the fluorescent signal intensity of Acinetobacter spp. cells in some blood culture specimens and facilitate the detection of these microorganisms.
topic Acinetobacter
bacteremia
blood culture
FISH
simultaneous hybridization
url https://www.exeley.com/exeley/journals/polish_journal_of_microbiology/67/1/pdf/10.5604_01.3001.0011.6137.pdf
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