Novel hypotheses emerging from GWAS in migraine?

Abstract Recent technical advances in genetics made large-scale genome-wide association studies (GWAS) in migraine feasible and have identified over 40 common DNA sequence variants that affect risk for migraine types. Most of the variants, which are all single nucleotide polymorphisms (SNPs), show r...

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Main Authors: Arn M. J. M. van den Maagdenberg, Dale R. Nyholt, Verneri Anttila
Format: Article
Language:English
Published: BMC 2019-01-01
Series:The Journal of Headache and Pain
Subjects:
Online Access:http://link.springer.com/article/10.1186/s10194-018-0956-x
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spelling doaj-8e204d0b95614863bc7442e95f0c1d512020-11-25T01:41:46ZengBMCThe Journal of Headache and Pain1129-23691129-23772019-01-012011710.1186/s10194-018-0956-xNovel hypotheses emerging from GWAS in migraine?Arn M. J. M. van den Maagdenberg0Dale R. Nyholt1Verneri Anttila2Department of Human Genetics, Leiden University Medical CentreSchool of Biomedical Sciences, Faculty of Health, Queensland University of TechnologyAnalytical and Translational Genetics Unit, Department of Medicine, Massachusetts General Hospital and Harvard Medical SchoolAbstract Recent technical advances in genetics made large-scale genome-wide association studies (GWAS) in migraine feasible and have identified over 40 common DNA sequence variants that affect risk for migraine types. Most of the variants, which are all single nucleotide polymorphisms (SNPs), show robust association with migraine as evidenced by the fact that the vast majority replicate in subsequent independent studies. However, despite thorough bioinformatic efforts aimed at linking the migraine risk SNPs with genes and their molecular pathways, there remains quite some discussion as to how successful this endeavour has been, and their current practical use for the diagnosis and treatment of migraine patients. Although existing genetic information seems to favour involvement of vascular mechanisms, but also neuronal and other mechanisms such as metal ion homeostasis and neuronal migration, the complexity of the underlying genetic pathophysiology presents challenges to advancing genetic knowledge to clinical use. A major issue is to what extent one can rely on bioinformatics to pinpoint the actual disease genes, and from this the linked pathways. In this Commentary, we will provide an overview of findings from GWAS in migraine, current hypotheses of the disease pathways that emerged from these findings, and some of the major drawbacks of the approaches used to identify the genes and pathways. We argue that more functional research is urgently needed to turn the hypotheses that emerge from GWAS in migraine to clinically useful information.http://link.springer.com/article/10.1186/s10194-018-0956-xGeneticsGenome-wide association studyDisease pathwaySingle-nucleotide polymorphism
collection DOAJ
language English
format Article
sources DOAJ
author Arn M. J. M. van den Maagdenberg
Dale R. Nyholt
Verneri Anttila
spellingShingle Arn M. J. M. van den Maagdenberg
Dale R. Nyholt
Verneri Anttila
Novel hypotheses emerging from GWAS in migraine?
The Journal of Headache and Pain
Genetics
Genome-wide association study
Disease pathway
Single-nucleotide polymorphism
author_facet Arn M. J. M. van den Maagdenberg
Dale R. Nyholt
Verneri Anttila
author_sort Arn M. J. M. van den Maagdenberg
title Novel hypotheses emerging from GWAS in migraine?
title_short Novel hypotheses emerging from GWAS in migraine?
title_full Novel hypotheses emerging from GWAS in migraine?
title_fullStr Novel hypotheses emerging from GWAS in migraine?
title_full_unstemmed Novel hypotheses emerging from GWAS in migraine?
title_sort novel hypotheses emerging from gwas in migraine?
publisher BMC
series The Journal of Headache and Pain
issn 1129-2369
1129-2377
publishDate 2019-01-01
description Abstract Recent technical advances in genetics made large-scale genome-wide association studies (GWAS) in migraine feasible and have identified over 40 common DNA sequence variants that affect risk for migraine types. Most of the variants, which are all single nucleotide polymorphisms (SNPs), show robust association with migraine as evidenced by the fact that the vast majority replicate in subsequent independent studies. However, despite thorough bioinformatic efforts aimed at linking the migraine risk SNPs with genes and their molecular pathways, there remains quite some discussion as to how successful this endeavour has been, and their current practical use for the diagnosis and treatment of migraine patients. Although existing genetic information seems to favour involvement of vascular mechanisms, but also neuronal and other mechanisms such as metal ion homeostasis and neuronal migration, the complexity of the underlying genetic pathophysiology presents challenges to advancing genetic knowledge to clinical use. A major issue is to what extent one can rely on bioinformatics to pinpoint the actual disease genes, and from this the linked pathways. In this Commentary, we will provide an overview of findings from GWAS in migraine, current hypotheses of the disease pathways that emerged from these findings, and some of the major drawbacks of the approaches used to identify the genes and pathways. We argue that more functional research is urgently needed to turn the hypotheses that emerge from GWAS in migraine to clinically useful information.
topic Genetics
Genome-wide association study
Disease pathway
Single-nucleotide polymorphism
url http://link.springer.com/article/10.1186/s10194-018-0956-x
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