Genetic Evaluation in a Cohort of 126 Dutch Pulmonary Arterial Hypertension Patients

Pulmonary arterial hypertension (PAH) is a severe, life-threatening disease, and in some cases is caused by genetic defects. This study sought to assess the diagnostic yield of genetic testing in a Dutch cohort of 126 PAH patients. Historically, genetic testing in the Netherlands consisted of the an...

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Main Authors: Lieke M. van den Heuvel, Samara M. A. Jansen, Suzanne I. M. Alsters, Marco C. Post, Jasper J. van der Smagt, Frances S. Handoko-De Man, J. Peter van Tintelen, Hans Gille, Imke Christiaans, Anton Vonk Noordegraaf, HarmJan Bogaard, Arjan C. Houweling
Format: Article
Language:English
Published: MDPI AG 2020-10-01
Series:Genes
Subjects:
Online Access:https://www.mdpi.com/2073-4425/11/10/1191
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spelling doaj-8e26303f46a244a288c31de9cf85804e2020-11-25T04:00:28ZengMDPI AGGenes2073-44252020-10-01111191119110.3390/genes11101191Genetic Evaluation in a Cohort of 126 Dutch Pulmonary Arterial Hypertension PatientsLieke M. van den Heuvel0Samara M. A. Jansen1Suzanne I. M. Alsters2Marco C. Post3Jasper J. van der Smagt4Frances S. Handoko-De Man5J. Peter van Tintelen6Hans Gille7Imke Christiaans8Anton Vonk Noordegraaf9HarmJan Bogaard10Arjan C. Houweling11Department of Clinical Genetics, Amsterdam UMC (location VUmc), 1081HV Amsterdam, The NetherlandsDepartment of Lung Disease, Amsterdam UMC (location VUmc), 1081HV Amsterdam, The NetherlandsDepartment of Clinical Genetics, Amsterdam UMC (location VUmc), 1081HV Amsterdam, The NetherlandsDepartment of Cardiology, St. Antonius hospital, 3435CM Nieuwegein, The NetherlandsDepartment of Genetics, University Medical Centre Utrecht, Utrecht University, 3584CX Utrecht, The NetherlandsDepartment of Lung Disease, Amsterdam UMC (location VUmc), 1081HV Amsterdam, The NetherlandsDepartment of Clinical Genetics, Amsterdam UMC (location VUmc), 1081HV Amsterdam, The NetherlandsDepartment of Clinical Genetics, Amsterdam UMC (location VUmc), 1081HV Amsterdam, The NetherlandsDepartment of Clinical Genetics, University Medical Centre Groningen, 9713GZ Groningen, The NetherlandsDepartment of Lung Disease, Amsterdam UMC (location VUmc), 1081HV Amsterdam, The NetherlandsDepartment of Lung Disease, Amsterdam UMC (location VUmc), 1081HV Amsterdam, The NetherlandsDepartment of Clinical Genetics, Amsterdam UMC (location VUmc), 1081HV Amsterdam, The NetherlandsPulmonary arterial hypertension (PAH) is a severe, life-threatening disease, and in some cases is caused by genetic defects. This study sought to assess the diagnostic yield of genetic testing in a Dutch cohort of 126 PAH patients. Historically, genetic testing in the Netherlands consisted of the analysis of BMPR2 and SMAD9. These genes were analyzed in 70 of the 126 patients. A (likely) pathogenic (LP/P) variant was detected in 22 (31%) of them. After the identification of additional PAH associated genes, a next generation sequencing (NGS) panel consisting of 19 genes was developed in 2018. Additional genetic testing was offered to the 48 <i>BMPR2</i> and <i>SMAD9</i> negative patients, out of which 28 opted for NGS analysis. In addition, this gene panel was analyzed in 56 newly identified idiopathic (IPAH) or pulmonary veno occlusive disease (PVOD) patients. In these 84 patients, NGS panel testing revealed LP/P variants in BMPR2 (<i>N</i> = 4), GDF2 (<i>N</i> = 2), EIF2AK4 (<i>N</i> = 1), and TBX4 (<i>N</i> = 3). Furthermore, 134 relatives of 32 probands with a LP/P variant were tested, yielding 41 carriers. NGS panel screening offered to IPAH/PVOD patients led to the identification of LP/P variants in GDF2, EIF2AK4, and TBX4 in six additional patients. The identification of LP/P variants in patients allows for screening of at-risk relatives, enabling the early identification of PAH.https://www.mdpi.com/2073-4425/11/10/1191pulmonary arterial hypertensiongenetic analysisNGS gene panelBMPR2TBX4GDF2
collection DOAJ
language English
format Article
sources DOAJ
author Lieke M. van den Heuvel
Samara M. A. Jansen
Suzanne I. M. Alsters
Marco C. Post
Jasper J. van der Smagt
Frances S. Handoko-De Man
J. Peter van Tintelen
Hans Gille
Imke Christiaans
Anton Vonk Noordegraaf
HarmJan Bogaard
Arjan C. Houweling
spellingShingle Lieke M. van den Heuvel
Samara M. A. Jansen
Suzanne I. M. Alsters
Marco C. Post
Jasper J. van der Smagt
Frances S. Handoko-De Man
J. Peter van Tintelen
Hans Gille
Imke Christiaans
Anton Vonk Noordegraaf
HarmJan Bogaard
Arjan C. Houweling
Genetic Evaluation in a Cohort of 126 Dutch Pulmonary Arterial Hypertension Patients
Genes
pulmonary arterial hypertension
genetic analysis
NGS gene panel
BMPR2
TBX4
GDF2
author_facet Lieke M. van den Heuvel
Samara M. A. Jansen
Suzanne I. M. Alsters
Marco C. Post
Jasper J. van der Smagt
Frances S. Handoko-De Man
J. Peter van Tintelen
Hans Gille
Imke Christiaans
Anton Vonk Noordegraaf
HarmJan Bogaard
Arjan C. Houweling
author_sort Lieke M. van den Heuvel
title Genetic Evaluation in a Cohort of 126 Dutch Pulmonary Arterial Hypertension Patients
title_short Genetic Evaluation in a Cohort of 126 Dutch Pulmonary Arterial Hypertension Patients
title_full Genetic Evaluation in a Cohort of 126 Dutch Pulmonary Arterial Hypertension Patients
title_fullStr Genetic Evaluation in a Cohort of 126 Dutch Pulmonary Arterial Hypertension Patients
title_full_unstemmed Genetic Evaluation in a Cohort of 126 Dutch Pulmonary Arterial Hypertension Patients
title_sort genetic evaluation in a cohort of 126 dutch pulmonary arterial hypertension patients
publisher MDPI AG
series Genes
issn 2073-4425
publishDate 2020-10-01
description Pulmonary arterial hypertension (PAH) is a severe, life-threatening disease, and in some cases is caused by genetic defects. This study sought to assess the diagnostic yield of genetic testing in a Dutch cohort of 126 PAH patients. Historically, genetic testing in the Netherlands consisted of the analysis of BMPR2 and SMAD9. These genes were analyzed in 70 of the 126 patients. A (likely) pathogenic (LP/P) variant was detected in 22 (31%) of them. After the identification of additional PAH associated genes, a next generation sequencing (NGS) panel consisting of 19 genes was developed in 2018. Additional genetic testing was offered to the 48 <i>BMPR2</i> and <i>SMAD9</i> negative patients, out of which 28 opted for NGS analysis. In addition, this gene panel was analyzed in 56 newly identified idiopathic (IPAH) or pulmonary veno occlusive disease (PVOD) patients. In these 84 patients, NGS panel testing revealed LP/P variants in BMPR2 (<i>N</i> = 4), GDF2 (<i>N</i> = 2), EIF2AK4 (<i>N</i> = 1), and TBX4 (<i>N</i> = 3). Furthermore, 134 relatives of 32 probands with a LP/P variant were tested, yielding 41 carriers. NGS panel screening offered to IPAH/PVOD patients led to the identification of LP/P variants in GDF2, EIF2AK4, and TBX4 in six additional patients. The identification of LP/P variants in patients allows for screening of at-risk relatives, enabling the early identification of PAH.
topic pulmonary arterial hypertension
genetic analysis
NGS gene panel
BMPR2
TBX4
GDF2
url https://www.mdpi.com/2073-4425/11/10/1191
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