Over-Production, Crystallization, and Preliminary X-ray Crystallographic Analysis of a Coiled-Coil Region in Human Pericentrin

The genes encoding three coiled-coil regions in human pericentrin were gene synthesized with Escherichia coli codon-optimization, and the proteins were successfully over-produced in large quantities using E. coli expression. After verifying that the purified proteins were mostly composed of α-helice...

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Main Authors: Min Ye Kim, Jeong Kuk Park, Yeowon Sim, Doheum Kim, Jeong Yeon Sim, SangYoun Park
Format: Article
Language:English
Published: MDPI AG 2017-10-01
Series:Crystals
Subjects:
Online Access:https://www.mdpi.com/2073-4352/7/10/296
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spelling doaj-8fd571a570ae40388fffd70c74f849d12020-11-24T21:54:11ZengMDPI AGCrystals2073-43522017-10-0171029610.3390/cryst7100296cryst7100296Over-Production, Crystallization, and Preliminary X-ray Crystallographic Analysis of a Coiled-Coil Region in Human PericentrinMin Ye Kim0Jeong Kuk Park1Yeowon Sim2Doheum Kim3Jeong Yeon Sim4SangYoun Park5School of Systems Biomedical Science, Soongsil University, Seoul 06978, KoreaSchool of Systems Biomedical Science, Soongsil University, Seoul 06978, KoreaSchool of Systems Biomedical Science, Soongsil University, Seoul 06978, KoreaSchool of Systems Biomedical Science, Soongsil University, Seoul 06978, KoreaSchool of Systems Biomedical Science, Soongsil University, Seoul 06978, KoreaSchool of Systems Biomedical Science, Soongsil University, Seoul 06978, KoreaThe genes encoding three coiled-coil regions in human pericentrin were gene synthesized with Escherichia coli codon-optimization, and the proteins were successfully over-produced in large quantities using E. coli expression. After verifying that the purified proteins were mostly composed of α-helices, one of the proteins was crystallized using polyethylene glycol 8000 as crystallizing agent. X-ray diffraction data were collected to 3.8 Å resolution under cryo-condition using synchrotron X-ray. The crystal belonged to space group C2 with unit cell parameters a = 324.9 Å, b = 35.7 Å, c = 79.5 Å, and β = 101.6˚. According to Matthews’ coefficient, the asymmetric unit may contain up to 12 subunits of the monomeric protein, with a crystal volume per protein mass (VM) of 1.96 Å3 Da−1 and a 37.3% solvent content.https://www.mdpi.com/2073-4352/7/10/296pericentrincoiled-coilcentrosomepericentriolar material (PCM)
collection DOAJ
language English
format Article
sources DOAJ
author Min Ye Kim
Jeong Kuk Park
Yeowon Sim
Doheum Kim
Jeong Yeon Sim
SangYoun Park
spellingShingle Min Ye Kim
Jeong Kuk Park
Yeowon Sim
Doheum Kim
Jeong Yeon Sim
SangYoun Park
Over-Production, Crystallization, and Preliminary X-ray Crystallographic Analysis of a Coiled-Coil Region in Human Pericentrin
Crystals
pericentrin
coiled-coil
centrosome
pericentriolar material (PCM)
author_facet Min Ye Kim
Jeong Kuk Park
Yeowon Sim
Doheum Kim
Jeong Yeon Sim
SangYoun Park
author_sort Min Ye Kim
title Over-Production, Crystallization, and Preliminary X-ray Crystallographic Analysis of a Coiled-Coil Region in Human Pericentrin
title_short Over-Production, Crystallization, and Preliminary X-ray Crystallographic Analysis of a Coiled-Coil Region in Human Pericentrin
title_full Over-Production, Crystallization, and Preliminary X-ray Crystallographic Analysis of a Coiled-Coil Region in Human Pericentrin
title_fullStr Over-Production, Crystallization, and Preliminary X-ray Crystallographic Analysis of a Coiled-Coil Region in Human Pericentrin
title_full_unstemmed Over-Production, Crystallization, and Preliminary X-ray Crystallographic Analysis of a Coiled-Coil Region in Human Pericentrin
title_sort over-production, crystallization, and preliminary x-ray crystallographic analysis of a coiled-coil region in human pericentrin
publisher MDPI AG
series Crystals
issn 2073-4352
publishDate 2017-10-01
description The genes encoding three coiled-coil regions in human pericentrin were gene synthesized with Escherichia coli codon-optimization, and the proteins were successfully over-produced in large quantities using E. coli expression. After verifying that the purified proteins were mostly composed of α-helices, one of the proteins was crystallized using polyethylene glycol 8000 as crystallizing agent. X-ray diffraction data were collected to 3.8 Å resolution under cryo-condition using synchrotron X-ray. The crystal belonged to space group C2 with unit cell parameters a = 324.9 Å, b = 35.7 Å, c = 79.5 Å, and β = 101.6˚. According to Matthews’ coefficient, the asymmetric unit may contain up to 12 subunits of the monomeric protein, with a crystal volume per protein mass (VM) of 1.96 Å3 Da−1 and a 37.3% solvent content.
topic pericentrin
coiled-coil
centrosome
pericentriolar material (PCM)
url https://www.mdpi.com/2073-4352/7/10/296
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