Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria
Although magnetotactic bacteria (MTB) are ubiquitous in aquatic habitats, they are still considered fastidious microorganisms with regard to growth and cultivation with only a relatively low number of axenic cultures available to date. Here, we report the first axenic culture of an MTB isolated in t...
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doaj-9121af5b59a1450ba50b06302390a7062020-11-24T20:40:28ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2014-02-01510.3389/fmicb.2014.0007277119Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the AlphaproteobacteriaViviana eMorillo0Fernanda eAbreu1Ana Carolina Araujo2Luiz Gonzaga Paula de Almeida3Alex Enrich Prast4Marcos eFarina5Ana Tereza Ribeiro de Vasconcelos6Dennis A. Bazylinski7Ulysses eLins8Universidade Federal do Rio de JaneiroUniversidade Federal do Rio de JaneiroUniversidade Federal do Rio de JaneiroLaboratório Nacional de Computação CIentífivaUnversidade Federal do Rio de JaneiroUniversidade Federal do Rio de JaneiroLaboratório Nacional de Computação CIentífivaUniversity of Nevada at Las VegasUniversidade Federal do Rio de JaneiroAlthough magnetotactic bacteria (MTB) are ubiquitous in aquatic habitats, they are still considered fastidious microorganisms with regard to growth and cultivation with only a relatively low number of axenic cultures available to date. Here, we report the first axenic culture of an MTB isolated in the Southern Hemisphere (Itaipu Lagoon in Rio de Janeiro, Brazil). Cells of this new isolate are coccoid to ovoid in morphology and grow microaerophilically in semi-solid medium containing an oxygen concentration ([O2]) gradient either under chemoorganoheterotrophic or chemolithoautotrophic conditions. Each cell contains a single chain of approximately 10 elongated cuboctahedral magnetite (Fe3O4) magnetosomes. Phylogenetic analysis based on the 16S rRNA gene sequence shows that the coccoid MTB isolated in this study represents a new genus in the Alphaproteobacteria; the name Magnetofaba australis strain IT-1 is proposed. Preliminary genomic data obtained by pyrosequencing shows that Mf. australis strain IT-1 contains a genomic region with genes involved in biomineralization similar to those found in the most closely related magnetotactic cocci Magnetococcus marinus strain MC-1. However, organization of the magnetosome genes differs from Mc. marinus.http://journal.frontiersin.org/Journal/10.3389/fmicb.2014.00072/fullMagnetitemagnetosomeMagnetobacter itaipuensis strain IT-1South-seeking magnetotactic bacteriabiomineralization genesMagnetofaba australis strain IT-1 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Viviana eMorillo Fernanda eAbreu Ana Carolina Araujo Luiz Gonzaga Paula de Almeida Alex Enrich Prast Marcos eFarina Ana Tereza Ribeiro de Vasconcelos Dennis A. Bazylinski Ulysses eLins |
spellingShingle |
Viviana eMorillo Fernanda eAbreu Ana Carolina Araujo Luiz Gonzaga Paula de Almeida Alex Enrich Prast Marcos eFarina Ana Tereza Ribeiro de Vasconcelos Dennis A. Bazylinski Ulysses eLins Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria Frontiers in Microbiology Magnetite magnetosome Magnetobacter itaipuensis strain IT-1 South-seeking magnetotactic bacteria biomineralization genes Magnetofaba australis strain IT-1 |
author_facet |
Viviana eMorillo Fernanda eAbreu Ana Carolina Araujo Luiz Gonzaga Paula de Almeida Alex Enrich Prast Marcos eFarina Ana Tereza Ribeiro de Vasconcelos Dennis A. Bazylinski Ulysses eLins |
author_sort |
Viviana eMorillo |
title |
Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria |
title_short |
Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria |
title_full |
Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria |
title_fullStr |
Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria |
title_full_unstemmed |
Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria |
title_sort |
isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of south-seeking magnetotactic cocci within the alphaproteobacteria |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Microbiology |
issn |
1664-302X |
publishDate |
2014-02-01 |
description |
Although magnetotactic bacteria (MTB) are ubiquitous in aquatic habitats, they are still considered fastidious microorganisms with regard to growth and cultivation with only a relatively low number of axenic cultures available to date. Here, we report the first axenic culture of an MTB isolated in the Southern Hemisphere (Itaipu Lagoon in Rio de Janeiro, Brazil). Cells of this new isolate are coccoid to ovoid in morphology and grow microaerophilically in semi-solid medium containing an oxygen concentration ([O2]) gradient either under chemoorganoheterotrophic or chemolithoautotrophic conditions. Each cell contains a single chain of approximately 10 elongated cuboctahedral magnetite (Fe3O4) magnetosomes. Phylogenetic analysis based on the 16S rRNA gene sequence shows that the coccoid MTB isolated in this study represents a new genus in the Alphaproteobacteria; the name Magnetofaba australis strain IT-1 is proposed. Preliminary genomic data obtained by pyrosequencing shows that Mf. australis strain IT-1 contains a genomic region with genes involved in biomineralization similar to those found in the most closely related magnetotactic cocci Magnetococcus marinus strain MC-1. However, organization of the magnetosome genes differs from Mc. marinus. |
topic |
Magnetite magnetosome Magnetobacter itaipuensis strain IT-1 South-seeking magnetotactic bacteria biomineralization genes Magnetofaba australis strain IT-1 |
url |
http://journal.frontiersin.org/Journal/10.3389/fmicb.2014.00072/full |
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