Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria

Although magnetotactic bacteria (MTB) are ubiquitous in aquatic habitats, they are still considered fastidious microorganisms with regard to growth and cultivation with only a relatively low number of axenic cultures available to date. Here, we report the first axenic culture of an MTB isolated in t...

Full description

Bibliographic Details
Main Authors: Viviana eMorillo, Fernanda eAbreu, Ana Carolina Araujo, Luiz Gonzaga Paula de Almeida, Alex Enrich Prast, Marcos eFarina, Ana Tereza Ribeiro de Vasconcelos, Dennis A. Bazylinski, Ulysses eLins
Format: Article
Language:English
Published: Frontiers Media S.A. 2014-02-01
Series:Frontiers in Microbiology
Subjects:
Online Access:http://journal.frontiersin.org/Journal/10.3389/fmicb.2014.00072/full
id doaj-9121af5b59a1450ba50b06302390a706
record_format Article
spelling doaj-9121af5b59a1450ba50b06302390a7062020-11-24T20:40:28ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2014-02-01510.3389/fmicb.2014.0007277119Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the AlphaproteobacteriaViviana eMorillo0Fernanda eAbreu1Ana Carolina Araujo2Luiz Gonzaga Paula de Almeida3Alex Enrich Prast4Marcos eFarina5Ana Tereza Ribeiro de Vasconcelos6Dennis A. Bazylinski7Ulysses eLins8Universidade Federal do Rio de JaneiroUniversidade Federal do Rio de JaneiroUniversidade Federal do Rio de JaneiroLaboratório Nacional de Computação CIentífivaUnversidade Federal do Rio de JaneiroUniversidade Federal do Rio de JaneiroLaboratório Nacional de Computação CIentífivaUniversity of Nevada at Las VegasUniversidade Federal do Rio de JaneiroAlthough magnetotactic bacteria (MTB) are ubiquitous in aquatic habitats, they are still considered fastidious microorganisms with regard to growth and cultivation with only a relatively low number of axenic cultures available to date. Here, we report the first axenic culture of an MTB isolated in the Southern Hemisphere (Itaipu Lagoon in Rio de Janeiro, Brazil). Cells of this new isolate are coccoid to ovoid in morphology and grow microaerophilically in semi-solid medium containing an oxygen concentration ([O2]) gradient either under chemoorganoheterotrophic or chemolithoautotrophic conditions. Each cell contains a single chain of approximately 10 elongated cuboctahedral magnetite (Fe3O4) magnetosomes. Phylogenetic analysis based on the 16S rRNA gene sequence shows that the coccoid MTB isolated in this study represents a new genus in the Alphaproteobacteria; the name Magnetofaba australis strain IT-1 is proposed. Preliminary genomic data obtained by pyrosequencing shows that Mf. australis strain IT-1 contains a genomic region with genes involved in biomineralization similar to those found in the most closely related magnetotactic cocci Magnetococcus marinus strain MC-1. However, organization of the magnetosome genes differs from Mc. marinus.http://journal.frontiersin.org/Journal/10.3389/fmicb.2014.00072/fullMagnetitemagnetosomeMagnetobacter itaipuensis strain IT-1South-seeking magnetotactic bacteriabiomineralization genesMagnetofaba australis strain IT-1
collection DOAJ
language English
format Article
sources DOAJ
author Viviana eMorillo
Fernanda eAbreu
Ana Carolina Araujo
Luiz Gonzaga Paula de Almeida
Alex Enrich Prast
Marcos eFarina
Ana Tereza Ribeiro de Vasconcelos
Dennis A. Bazylinski
Ulysses eLins
spellingShingle Viviana eMorillo
Fernanda eAbreu
Ana Carolina Araujo
Luiz Gonzaga Paula de Almeida
Alex Enrich Prast
Marcos eFarina
Ana Tereza Ribeiro de Vasconcelos
Dennis A. Bazylinski
Ulysses eLins
Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria
Frontiers in Microbiology
Magnetite
magnetosome
Magnetobacter itaipuensis strain IT-1
South-seeking magnetotactic bacteria
biomineralization genes
Magnetofaba australis strain IT-1
author_facet Viviana eMorillo
Fernanda eAbreu
Ana Carolina Araujo
Luiz Gonzaga Paula de Almeida
Alex Enrich Prast
Marcos eFarina
Ana Tereza Ribeiro de Vasconcelos
Dennis A. Bazylinski
Ulysses eLins
author_sort Viviana eMorillo
title Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria
title_short Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria
title_full Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria
title_fullStr Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria
title_full_unstemmed Isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of South-seeking magnetotactic cocci within the Alphaproteobacteria
title_sort isolation, cultivation and genomic analysis of magnetosome biomineralization genes of a new genus of south-seeking magnetotactic cocci within the alphaproteobacteria
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2014-02-01
description Although magnetotactic bacteria (MTB) are ubiquitous in aquatic habitats, they are still considered fastidious microorganisms with regard to growth and cultivation with only a relatively low number of axenic cultures available to date. Here, we report the first axenic culture of an MTB isolated in the Southern Hemisphere (Itaipu Lagoon in Rio de Janeiro, Brazil). Cells of this new isolate are coccoid to ovoid in morphology and grow microaerophilically in semi-solid medium containing an oxygen concentration ([O2]) gradient either under chemoorganoheterotrophic or chemolithoautotrophic conditions. Each cell contains a single chain of approximately 10 elongated cuboctahedral magnetite (Fe3O4) magnetosomes. Phylogenetic analysis based on the 16S rRNA gene sequence shows that the coccoid MTB isolated in this study represents a new genus in the Alphaproteobacteria; the name Magnetofaba australis strain IT-1 is proposed. Preliminary genomic data obtained by pyrosequencing shows that Mf. australis strain IT-1 contains a genomic region with genes involved in biomineralization similar to those found in the most closely related magnetotactic cocci Magnetococcus marinus strain MC-1. However, organization of the magnetosome genes differs from Mc. marinus.
topic Magnetite
magnetosome
Magnetobacter itaipuensis strain IT-1
South-seeking magnetotactic bacteria
biomineralization genes
Magnetofaba australis strain IT-1
url http://journal.frontiersin.org/Journal/10.3389/fmicb.2014.00072/full
work_keys_str_mv AT vivianaemorillo isolationcultivationandgenomicanalysisofmagnetosomebiomineralizationgenesofanewgenusofsouthseekingmagnetotacticcocciwithinthealphaproteobacteria
AT fernandaeabreu isolationcultivationandgenomicanalysisofmagnetosomebiomineralizationgenesofanewgenusofsouthseekingmagnetotacticcocciwithinthealphaproteobacteria
AT anacarolinaaraujo isolationcultivationandgenomicanalysisofmagnetosomebiomineralizationgenesofanewgenusofsouthseekingmagnetotacticcocciwithinthealphaproteobacteria
AT luizgonzagapauladealmeida isolationcultivationandgenomicanalysisofmagnetosomebiomineralizationgenesofanewgenusofsouthseekingmagnetotacticcocciwithinthealphaproteobacteria
AT alexenrichprast isolationcultivationandgenomicanalysisofmagnetosomebiomineralizationgenesofanewgenusofsouthseekingmagnetotacticcocciwithinthealphaproteobacteria
AT marcosefarina isolationcultivationandgenomicanalysisofmagnetosomebiomineralizationgenesofanewgenusofsouthseekingmagnetotacticcocciwithinthealphaproteobacteria
AT anaterezaribeirodevasconcelos isolationcultivationandgenomicanalysisofmagnetosomebiomineralizationgenesofanewgenusofsouthseekingmagnetotacticcocciwithinthealphaproteobacteria
AT dennisabazylinski isolationcultivationandgenomicanalysisofmagnetosomebiomineralizationgenesofanewgenusofsouthseekingmagnetotacticcocciwithinthealphaproteobacteria
AT ulysseselins isolationcultivationandgenomicanalysisofmagnetosomebiomineralizationgenesofanewgenusofsouthseekingmagnetotacticcocciwithinthealphaproteobacteria
_version_ 1716826934727409664