Isolation, characterization, and cross‐amplification of 20 microsatellite markers for Conospermum undulatum (Proteaceae)

Premise Recent habitat fragmentation is posing a risk to the wavy‐leaved smokebush, Conospermum undulatum (Proteaceae), a rare plant species endemic to southwestern Western Australia. Microsatellite markers are required to characterize the genetic diversity and structure of the species for conservat...

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Main Authors: Nicola Delnevo, Andrea Piotti, Eddie J. vanEtten, William D. Stock, Margaret Byrne
Format: Article
Language:English
Published: Wiley 2019-08-01
Series:Applications in Plant Sciences
Subjects:
Online Access:https://doi.org/10.1002/aps3.11283
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spelling doaj-9364fa87560449c0be36ac6c65ac5f182020-11-25T01:08:14ZengWileyApplications in Plant Sciences2168-04502019-08-0178n/an/a10.1002/aps3.11283Isolation, characterization, and cross‐amplification of 20 microsatellite markers for Conospermum undulatum (Proteaceae)Nicola Delnevo0Andrea Piotti1Eddie J. vanEtten2William D. Stock3Margaret Byrne4Centre for Ecosystem Management Edith Cowan University 270 Joondalup Drive Joondalup 6027 Western Australia AustraliaInstitute of Biosciences and BioResources (IBBR) National Research Council (CNR) 50019 Sesto Fiorentino (Firenze) ItalyCentre for Ecosystem Management Edith Cowan University 270 Joondalup Drive Joondalup 6027 Western Australia AustraliaCentre for Ecosystem Management Edith Cowan University 270 Joondalup Drive Joondalup 6027 Western Australia AustraliaBiodiversity and Conservation Science Department of Biodiversity Conservation and Attractions Bentley Delivery Centre Locked Bag 104 Bentley Western Australia 6983 AustraliaPremise Recent habitat fragmentation is posing a risk to the wavy‐leaved smokebush, Conospermum undulatum (Proteaceae), a rare plant species endemic to southwestern Western Australia. Microsatellite markers are required to characterize the genetic diversity and structure of the species for conservation purposes and to facilitate ecological studies. Methods and Results Illumina MiSeq high‐throughput sequencing was used to develop 20 novel microsatellite markers for C. undulatum. Polymorphism at each locus was assessed using 72 individuals from three natural populations. Nineteen markers were polymorphic, with the number of alleles per locus ranging from two to 21, and observed and expected heterozygosity ranging from 0.000 to 1.000 and 0.117 to 0.919, respectively. All markers successfully amplified in three congeneric species (C. stoechadis, C. canaliculatum and C. triplinervium). Conclusions The microsatellite markers will be useful for revealing patterns of genetic diversity, dispersal dynamics, and hybridization events for C. undulatum to inform future conservation efforts.https://doi.org/10.1002/aps3.11283AustraliaConospermum undulatumconservationhybridizationmicrosatellite primersProteaceae
collection DOAJ
language English
format Article
sources DOAJ
author Nicola Delnevo
Andrea Piotti
Eddie J. vanEtten
William D. Stock
Margaret Byrne
spellingShingle Nicola Delnevo
Andrea Piotti
Eddie J. vanEtten
William D. Stock
Margaret Byrne
Isolation, characterization, and cross‐amplification of 20 microsatellite markers for Conospermum undulatum (Proteaceae)
Applications in Plant Sciences
Australia
Conospermum undulatum
conservation
hybridization
microsatellite primers
Proteaceae
author_facet Nicola Delnevo
Andrea Piotti
Eddie J. vanEtten
William D. Stock
Margaret Byrne
author_sort Nicola Delnevo
title Isolation, characterization, and cross‐amplification of 20 microsatellite markers for Conospermum undulatum (Proteaceae)
title_short Isolation, characterization, and cross‐amplification of 20 microsatellite markers for Conospermum undulatum (Proteaceae)
title_full Isolation, characterization, and cross‐amplification of 20 microsatellite markers for Conospermum undulatum (Proteaceae)
title_fullStr Isolation, characterization, and cross‐amplification of 20 microsatellite markers for Conospermum undulatum (Proteaceae)
title_full_unstemmed Isolation, characterization, and cross‐amplification of 20 microsatellite markers for Conospermum undulatum (Proteaceae)
title_sort isolation, characterization, and cross‐amplification of 20 microsatellite markers for conospermum undulatum (proteaceae)
publisher Wiley
series Applications in Plant Sciences
issn 2168-0450
publishDate 2019-08-01
description Premise Recent habitat fragmentation is posing a risk to the wavy‐leaved smokebush, Conospermum undulatum (Proteaceae), a rare plant species endemic to southwestern Western Australia. Microsatellite markers are required to characterize the genetic diversity and structure of the species for conservation purposes and to facilitate ecological studies. Methods and Results Illumina MiSeq high‐throughput sequencing was used to develop 20 novel microsatellite markers for C. undulatum. Polymorphism at each locus was assessed using 72 individuals from three natural populations. Nineteen markers were polymorphic, with the number of alleles per locus ranging from two to 21, and observed and expected heterozygosity ranging from 0.000 to 1.000 and 0.117 to 0.919, respectively. All markers successfully amplified in three congeneric species (C. stoechadis, C. canaliculatum and C. triplinervium). Conclusions The microsatellite markers will be useful for revealing patterns of genetic diversity, dispersal dynamics, and hybridization events for C. undulatum to inform future conservation efforts.
topic Australia
Conospermum undulatum
conservation
hybridization
microsatellite primers
Proteaceae
url https://doi.org/10.1002/aps3.11283
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