Inter-model comparison of the landscape determinants of vector-borne disease: implications for epidemiological and entomological risk modeling.

Extrapolating landscape regression models for use in assessing vector-borne disease risk and other applications requires thoughtful evaluation of fundamental model choice issues. To examine implications of such choices, an analysis was conducted to explore the extent to which disparate landscape mod...

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Main Authors: Alyson Lorenz, Radhika Dhingra, Howard H Chang, Donal Bisanzio, Yang Liu, Justin V Remais
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2014-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC4114569?pdf=render
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spelling doaj-94f7201f02c5481ab406294bd36c81632020-11-25T02:06:06ZengPublic Library of Science (PLoS)PLoS ONE1932-62032014-01-0197e10316310.1371/journal.pone.0103163Inter-model comparison of the landscape determinants of vector-borne disease: implications for epidemiological and entomological risk modeling.Alyson LorenzRadhika DhingraHoward H ChangDonal BisanzioYang LiuJustin V RemaisExtrapolating landscape regression models for use in assessing vector-borne disease risk and other applications requires thoughtful evaluation of fundamental model choice issues. To examine implications of such choices, an analysis was conducted to explore the extent to which disparate landscape models agree in their epidemiological and entomological risk predictions when extrapolated to new regions. Agreement between six literature-drawn landscape models was examined by comparing predicted county-level distributions of either Lyme disease or Ixodes scapularis vector using Spearman ranked correlation. AUC analyses and multinomial logistic regression were used to assess the ability of these extrapolated landscape models to predict observed national data. Three models based on measures of vegetation, habitat patch characteristics, and herbaceous landcover emerged as effective predictors of observed disease and vector distribution. An ensemble model containing these three models improved precision and predictive ability over individual models. A priori assessment of qualitative model characteristics effectively identified models that subsequently emerged as better predictors in quantitative analysis. Both a methodology for quantitative model comparison and a checklist for qualitative assessment of candidate models for extrapolation are provided; both tools aim to improve collaboration between those producing models and those interested in applying them to new areas and research questions.http://europepmc.org/articles/PMC4114569?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Alyson Lorenz
Radhika Dhingra
Howard H Chang
Donal Bisanzio
Yang Liu
Justin V Remais
spellingShingle Alyson Lorenz
Radhika Dhingra
Howard H Chang
Donal Bisanzio
Yang Liu
Justin V Remais
Inter-model comparison of the landscape determinants of vector-borne disease: implications for epidemiological and entomological risk modeling.
PLoS ONE
author_facet Alyson Lorenz
Radhika Dhingra
Howard H Chang
Donal Bisanzio
Yang Liu
Justin V Remais
author_sort Alyson Lorenz
title Inter-model comparison of the landscape determinants of vector-borne disease: implications for epidemiological and entomological risk modeling.
title_short Inter-model comparison of the landscape determinants of vector-borne disease: implications for epidemiological and entomological risk modeling.
title_full Inter-model comparison of the landscape determinants of vector-borne disease: implications for epidemiological and entomological risk modeling.
title_fullStr Inter-model comparison of the landscape determinants of vector-borne disease: implications for epidemiological and entomological risk modeling.
title_full_unstemmed Inter-model comparison of the landscape determinants of vector-borne disease: implications for epidemiological and entomological risk modeling.
title_sort inter-model comparison of the landscape determinants of vector-borne disease: implications for epidemiological and entomological risk modeling.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2014-01-01
description Extrapolating landscape regression models for use in assessing vector-borne disease risk and other applications requires thoughtful evaluation of fundamental model choice issues. To examine implications of such choices, an analysis was conducted to explore the extent to which disparate landscape models agree in their epidemiological and entomological risk predictions when extrapolated to new regions. Agreement between six literature-drawn landscape models was examined by comparing predicted county-level distributions of either Lyme disease or Ixodes scapularis vector using Spearman ranked correlation. AUC analyses and multinomial logistic regression were used to assess the ability of these extrapolated landscape models to predict observed national data. Three models based on measures of vegetation, habitat patch characteristics, and herbaceous landcover emerged as effective predictors of observed disease and vector distribution. An ensemble model containing these three models improved precision and predictive ability over individual models. A priori assessment of qualitative model characteristics effectively identified models that subsequently emerged as better predictors in quantitative analysis. Both a methodology for quantitative model comparison and a checklist for qualitative assessment of candidate models for extrapolation are provided; both tools aim to improve collaboration between those producing models and those interested in applying them to new areas and research questions.
url http://europepmc.org/articles/PMC4114569?pdf=render
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