Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections

Jiajie Zhang,1 Yicheng Huang,1 Hao Xu,2 Shuaibing Ying,2 Hongying Pan,1 Wei Yu2 1Department of Infectious Diseases, Zhejiang Provincial People’s Hospital, People’s Hospital of Hangzhou Medical College, Hangzhou, People’s Republic of China; 2State Key Laboratory for Diagnosis and Treatment of Infecti...

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Main Authors: Zhang J, Huang Y, Xu H, Ying S, Pan H, Yu W
Format: Article
Language:English
Published: Dove Medical Press 2021-09-01
Series:Infection and Drug Resistance
Subjects:
Online Access:https://www.dovepress.com/genomic-and-phenotypic-characteristics-for-vibrio-vulnificus-infection-peer-reviewed-fulltext-article-IDR
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spelling doaj-9511ba6422fb4cccb6351a1f322234a92021-09-14T20:57:33ZengDove Medical PressInfection and Drug Resistance1178-69732021-09-01Volume 143721372668801Genomic and Phenotypic Characteristics for Vibrio vulnificus InfectionsZhang JHuang YXu HYing SPan HYu WJiajie Zhang,1 Yicheng Huang,1 Hao Xu,2 Shuaibing Ying,2 Hongying Pan,1 Wei Yu2 1Department of Infectious Diseases, Zhejiang Provincial People’s Hospital, People’s Hospital of Hangzhou Medical College, Hangzhou, People’s Republic of China; 2State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, People’s Republic of ChinaCorrespondence: Hongying PanDepartment of Infectious Diseases, Zhejiang Provincial People’s Hospital, People’s Hospital of Hangzhou Medical College, Hangzhou, People’s Republic of ChinaTel/Fax +86-571-85893027Email hypanhz@139.comWei YuState Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, People’s Republic of ChinaTel/Fax +86-571-87236606Email wyu@zju.edu.cnBackground: Vibrio vulnificus (VV) is a causative agent of foodborne diseases with high mortality. The aim of this study was to investigate the genomic and phenotypic profiles of VV.Methods: Six VV isolates were collected and conducted whole-genome sequencing. Biofilm formation and anti-complement killing test were performed to evaluate the pathogenicity. Subsequently, 157 publicly available genomes of VV isolates were selected to determine the evolutionary relationship.Results: The resistant genes norM and tet34 were identified in six isolates. A total of 156 virulence genes were identified. However, there is no obvious difference between strains isolated from blood and puncture fluid. The tendency of growth for six isolates decreased with the lapse of time, while the biofilm formation increased. The genes tadC and flp related to Flp pili were found in isolate 25506 and 30896, resulting in more obvious biofilm formation. In addition, the survival rate of 19656 was less than 20% due to lack of one genomic island including virulence genes (impD-H, clpV-1) relevant to type VI secretion system (T6SS). Multi-locus sequence typing (MLST) revealed 95 different STs and 19 novel STs, indicating that the tendency of 163 isolates was sporadic. Further comparative genomics analysis clearly classified 163 isolates into three distinct evolutionary lineages.Conclusion: VV infections were sporadic in humans and the environment. Virulence genes impD-H and clpV-1 related to T6SS were associated with pathogenicity phenotype of VV.Keywords: resistance genes, virulent factors, biofilm, type VI secretion systemhttps://www.dovepress.com/genomic-and-phenotypic-characteristics-for-vibrio-vulnificus-infection-peer-reviewed-fulltext-article-IDRresistance genesvirulent factorsbiofilmtype vi secretion system
collection DOAJ
language English
format Article
sources DOAJ
author Zhang J
Huang Y
Xu H
Ying S
Pan H
Yu W
spellingShingle Zhang J
Huang Y
Xu H
Ying S
Pan H
Yu W
Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections
Infection and Drug Resistance
resistance genes
virulent factors
biofilm
type vi secretion system
author_facet Zhang J
Huang Y
Xu H
Ying S
Pan H
Yu W
author_sort Zhang J
title Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections
title_short Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections
title_full Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections
title_fullStr Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections
title_full_unstemmed Genomic and Phenotypic Characteristics for Vibrio vulnificus Infections
title_sort genomic and phenotypic characteristics for vibrio vulnificus infections
publisher Dove Medical Press
series Infection and Drug Resistance
issn 1178-6973
publishDate 2021-09-01
description Jiajie Zhang,1 Yicheng Huang,1 Hao Xu,2 Shuaibing Ying,2 Hongying Pan,1 Wei Yu2 1Department of Infectious Diseases, Zhejiang Provincial People’s Hospital, People’s Hospital of Hangzhou Medical College, Hangzhou, People’s Republic of China; 2State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, People’s Republic of ChinaCorrespondence: Hongying PanDepartment of Infectious Diseases, Zhejiang Provincial People’s Hospital, People’s Hospital of Hangzhou Medical College, Hangzhou, People’s Republic of ChinaTel/Fax +86-571-85893027Email hypanhz@139.comWei YuState Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, People’s Republic of ChinaTel/Fax +86-571-87236606Email wyu@zju.edu.cnBackground: Vibrio vulnificus (VV) is a causative agent of foodborne diseases with high mortality. The aim of this study was to investigate the genomic and phenotypic profiles of VV.Methods: Six VV isolates were collected and conducted whole-genome sequencing. Biofilm formation and anti-complement killing test were performed to evaluate the pathogenicity. Subsequently, 157 publicly available genomes of VV isolates were selected to determine the evolutionary relationship.Results: The resistant genes norM and tet34 were identified in six isolates. A total of 156 virulence genes were identified. However, there is no obvious difference between strains isolated from blood and puncture fluid. The tendency of growth for six isolates decreased with the lapse of time, while the biofilm formation increased. The genes tadC and flp related to Flp pili were found in isolate 25506 and 30896, resulting in more obvious biofilm formation. In addition, the survival rate of 19656 was less than 20% due to lack of one genomic island including virulence genes (impD-H, clpV-1) relevant to type VI secretion system (T6SS). Multi-locus sequence typing (MLST) revealed 95 different STs and 19 novel STs, indicating that the tendency of 163 isolates was sporadic. Further comparative genomics analysis clearly classified 163 isolates into three distinct evolutionary lineages.Conclusion: VV infections were sporadic in humans and the environment. Virulence genes impD-H and clpV-1 related to T6SS were associated with pathogenicity phenotype of VV.Keywords: resistance genes, virulent factors, biofilm, type VI secretion system
topic resistance genes
virulent factors
biofilm
type vi secretion system
url https://www.dovepress.com/genomic-and-phenotypic-characteristics-for-vibrio-vulnificus-infection-peer-reviewed-fulltext-article-IDR
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