Movement artefact removal from NIRS signal using multi-channel IMU data

Abstract Background The non-invasive nature of near-infrared spectroscopy (NIRS) makes it a widely accepted method for blood oxygenation measurement in various parts of the human body. One of the main challenges in this method lies in the successful removal of movement artefacts in the detected sign...

Full description

Bibliographic Details
Main Authors: Masudur R. Siddiquee, J. Sebastian Marquez, Roozbeh Atri, Rodrigo Ramon, Robin Perry Mayrand, Ou Bai
Format: Article
Language:English
Published: BMC 2018-09-01
Series:BioMedical Engineering OnLine
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12938-018-0554-9
id doaj-95b19edec2394fc28a063cb8159b492a
record_format Article
spelling doaj-95b19edec2394fc28a063cb8159b492a2020-11-25T02:13:26ZengBMCBioMedical Engineering OnLine1475-925X2018-09-0117111610.1186/s12938-018-0554-9Movement artefact removal from NIRS signal using multi-channel IMU dataMasudur R. Siddiquee0J. Sebastian Marquez1Roozbeh Atri2Rodrigo Ramon3Robin Perry Mayrand4Ou Bai5Florida International UniversityFlorida International UniversityFlorida International UniversityFlorida International UniversityFlorida International UniversityFlorida International UniversityAbstract Background The non-invasive nature of near-infrared spectroscopy (NIRS) makes it a widely accepted method for blood oxygenation measurement in various parts of the human body. One of the main challenges in this method lies in the successful removal of movement artefacts in the detected signal. In this respect, multi-channel inertia measurement unit (IMU) containing accelerometer, gyroscope and magnetometer can be used for better modelling of movement artefact than using accelerometer only, which as a result, movement artefact can be more accurately removed. Methods A wearable two-channel continuous wave NIRS system, incorporating an IMU sensor which contain accelerometer, gyroscope and magnetometer in it, was developed to record NIRS signal along with the simultaneous recording of movement artefacts related signal using the IMU. Four healthy subjects volunteered in the recording of the NIRS signals. During the recording from the first two subject, movement artefacts were simulated in one of the NIRS channels by tapping the photodiode sensor nearby. The corresponding IMU data for the simulated movement artefacts were used to estimate the artefacts in the corrupted signal by autoregressive with exogenous input method and subtracted from the corrupted signal to remove the artefacts in the NIRS signal. Signal-to-noise ratio (SNR) improvement was used to evaluate the performance of the movement artefacts removal process. The performance of the movement artefacts estimation and removal were compared using accelerometer only, accelerometer and gyroscope, and accelerometer, gyroscope and magnetometer data from IMU sensor to estimate the artefact in NIRS reading. For the remaining two subjects the NIRS signal was recorded by natural movement artefacts impact and the results of artefacts removal was compared using accelerometer only, accelerometer and gyroscope, and accelerometer, gyroscope and magnetometer data from IMU sensor to estimate the artefact in NIRS reading. Results The quantitative and qualitative results revealed that the SNR improvement increases with the number of IMU channels used in the artefacts estimation, and there were approximately 5–11 dB increase in SNR when nine channel IMU data were used rather than using only three channel accelerometer data only. The artefact removal from natural movements also demonstrated that the combination of gyroscope and magnetometer sensors with accelerometer provided better estimation and removal of the movement artefacts, which was revealed by the minimal change of the HbO2 and Hb level before, during and after movement artefacts occurred in the NIRS signal. Conclusion The movement artefacts in NIRS can be more accurately estimated and removed by using accelerometer, gyroscope and magnetograph signals from an integrated IMU sensor than using accelerometer signal only.http://link.springer.com/article/10.1186/s12938-018-0554-9NIRSNear infrared spectroscopyMotion artefactsMulti-channel IMUAccelerometerGyroscope
collection DOAJ
language English
format Article
sources DOAJ
author Masudur R. Siddiquee
J. Sebastian Marquez
Roozbeh Atri
Rodrigo Ramon
Robin Perry Mayrand
Ou Bai
spellingShingle Masudur R. Siddiquee
J. Sebastian Marquez
Roozbeh Atri
Rodrigo Ramon
Robin Perry Mayrand
Ou Bai
Movement artefact removal from NIRS signal using multi-channel IMU data
BioMedical Engineering OnLine
NIRS
Near infrared spectroscopy
Motion artefacts
Multi-channel IMU
Accelerometer
Gyroscope
author_facet Masudur R. Siddiquee
J. Sebastian Marquez
Roozbeh Atri
Rodrigo Ramon
Robin Perry Mayrand
Ou Bai
author_sort Masudur R. Siddiquee
title Movement artefact removal from NIRS signal using multi-channel IMU data
title_short Movement artefact removal from NIRS signal using multi-channel IMU data
title_full Movement artefact removal from NIRS signal using multi-channel IMU data
title_fullStr Movement artefact removal from NIRS signal using multi-channel IMU data
title_full_unstemmed Movement artefact removal from NIRS signal using multi-channel IMU data
title_sort movement artefact removal from nirs signal using multi-channel imu data
publisher BMC
series BioMedical Engineering OnLine
issn 1475-925X
publishDate 2018-09-01
description Abstract Background The non-invasive nature of near-infrared spectroscopy (NIRS) makes it a widely accepted method for blood oxygenation measurement in various parts of the human body. One of the main challenges in this method lies in the successful removal of movement artefacts in the detected signal. In this respect, multi-channel inertia measurement unit (IMU) containing accelerometer, gyroscope and magnetometer can be used for better modelling of movement artefact than using accelerometer only, which as a result, movement artefact can be more accurately removed. Methods A wearable two-channel continuous wave NIRS system, incorporating an IMU sensor which contain accelerometer, gyroscope and magnetometer in it, was developed to record NIRS signal along with the simultaneous recording of movement artefacts related signal using the IMU. Four healthy subjects volunteered in the recording of the NIRS signals. During the recording from the first two subject, movement artefacts were simulated in one of the NIRS channels by tapping the photodiode sensor nearby. The corresponding IMU data for the simulated movement artefacts were used to estimate the artefacts in the corrupted signal by autoregressive with exogenous input method and subtracted from the corrupted signal to remove the artefacts in the NIRS signal. Signal-to-noise ratio (SNR) improvement was used to evaluate the performance of the movement artefacts removal process. The performance of the movement artefacts estimation and removal were compared using accelerometer only, accelerometer and gyroscope, and accelerometer, gyroscope and magnetometer data from IMU sensor to estimate the artefact in NIRS reading. For the remaining two subjects the NIRS signal was recorded by natural movement artefacts impact and the results of artefacts removal was compared using accelerometer only, accelerometer and gyroscope, and accelerometer, gyroscope and magnetometer data from IMU sensor to estimate the artefact in NIRS reading. Results The quantitative and qualitative results revealed that the SNR improvement increases with the number of IMU channels used in the artefacts estimation, and there were approximately 5–11 dB increase in SNR when nine channel IMU data were used rather than using only three channel accelerometer data only. The artefact removal from natural movements also demonstrated that the combination of gyroscope and magnetometer sensors with accelerometer provided better estimation and removal of the movement artefacts, which was revealed by the minimal change of the HbO2 and Hb level before, during and after movement artefacts occurred in the NIRS signal. Conclusion The movement artefacts in NIRS can be more accurately estimated and removed by using accelerometer, gyroscope and magnetograph signals from an integrated IMU sensor than using accelerometer signal only.
topic NIRS
Near infrared spectroscopy
Motion artefacts
Multi-channel IMU
Accelerometer
Gyroscope
url http://link.springer.com/article/10.1186/s12938-018-0554-9
work_keys_str_mv AT masudurrsiddiquee movementartefactremovalfromnirssignalusingmultichannelimudata
AT jsebastianmarquez movementartefactremovalfromnirssignalusingmultichannelimudata
AT roozbehatri movementartefactremovalfromnirssignalusingmultichannelimudata
AT rodrigoramon movementartefactremovalfromnirssignalusingmultichannelimudata
AT robinperrymayrand movementartefactremovalfromnirssignalusingmultichannelimudata
AT oubai movementartefactremovalfromnirssignalusingmultichannelimudata
_version_ 1724905259751440384