Verification of the Combimatrix influenza detection assay for the detection of influenza A subtype during the 2007–2008 influenza season in Toronto, Canada

<p>Abstract</p> <p>The increase in adamantine resistance in influenza A (H3N2) and the emergence of oseltamivir resistance in influenza A (H1N1) has necessitated the use of rapid methodologies to detect influenza subtype. The purpose of this study was to evaluate the CombiMatrix in...

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Main Authors: Blair Joanne, Eshaghi AliReza, Yeung Rani, Lombos Ernesto, Bolotin Shelly, Drews Steven J
Format: Article
Language:English
Published: BMC 2009-03-01
Series:Virology Journal
Online Access:http://www.virologyj.com/content/6/1/37
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spelling doaj-9703ead53a874086a49f7e2ec0313b0a2020-11-25T01:49:16ZengBMCVirology Journal1743-422X2009-03-01613710.1186/1743-422X-6-37Verification of the Combimatrix influenza detection assay for the detection of influenza A subtype during the 2007–2008 influenza season in Toronto, CanadaBlair JoanneEshaghi AliRezaYeung RaniLombos ErnestoBolotin ShellyDrews Steven J<p>Abstract</p> <p>The increase in adamantine resistance in influenza A (H3N2) and the emergence of oseltamivir resistance in influenza A (H1N1) has necessitated the use of rapid methodologies to detect influenza subtype. The purpose of this study was to evaluate the CombiMatrix influenza detection system compared to the FDA approved Luminex Respiratory virus panel (RVP) assay for influenza A subtyping. Verification of the CombiMatrix influenza detection system was carried out using the Luminex RVP assay as a reference method. A limit of detection (LOD) series was performed using the Luminex and CombiMatrix systems with both influenza A H3N2 and H1N1 viruses. Seventy-five clinical specimens were used in the study. Of these, 16 were influenza A (H3N2) positive and five were influenza A (H1N1) positive. Fifty-four specimens were influenza A negative or "no call" (inconclusive) or could not be subtyped. The LOD of the Luminex RVP assay was found to be 0.3 TCID<sub>50</sub>s/mL for influenza A (H3N2) and 16 TCID<sub>50</sub>s/mL for influenza A (H1N1). The LOD of the CombiMatrix influenza detection system was 200 TCID<sub>50</sub>s/mL for influenza A (H3N2) and 16 000 TCID<sub>50</sub>s/mL for influenza A (H1N1). The sensitivity of the CombiMatrix influenza detection system was 95.2% and the specificity was 100%. The CombiMatrix influenza detection system is an effective methodology for influenza A subtype analysis, specifically in laboratories with a constrained budget or limited molecular capabilities.</p> http://www.virologyj.com/content/6/1/37
collection DOAJ
language English
format Article
sources DOAJ
author Blair Joanne
Eshaghi AliReza
Yeung Rani
Lombos Ernesto
Bolotin Shelly
Drews Steven J
spellingShingle Blair Joanne
Eshaghi AliReza
Yeung Rani
Lombos Ernesto
Bolotin Shelly
Drews Steven J
Verification of the Combimatrix influenza detection assay for the detection of influenza A subtype during the 2007–2008 influenza season in Toronto, Canada
Virology Journal
author_facet Blair Joanne
Eshaghi AliReza
Yeung Rani
Lombos Ernesto
Bolotin Shelly
Drews Steven J
author_sort Blair Joanne
title Verification of the Combimatrix influenza detection assay for the detection of influenza A subtype during the 2007–2008 influenza season in Toronto, Canada
title_short Verification of the Combimatrix influenza detection assay for the detection of influenza A subtype during the 2007–2008 influenza season in Toronto, Canada
title_full Verification of the Combimatrix influenza detection assay for the detection of influenza A subtype during the 2007–2008 influenza season in Toronto, Canada
title_fullStr Verification of the Combimatrix influenza detection assay for the detection of influenza A subtype during the 2007–2008 influenza season in Toronto, Canada
title_full_unstemmed Verification of the Combimatrix influenza detection assay for the detection of influenza A subtype during the 2007–2008 influenza season in Toronto, Canada
title_sort verification of the combimatrix influenza detection assay for the detection of influenza a subtype during the 2007–2008 influenza season in toronto, canada
publisher BMC
series Virology Journal
issn 1743-422X
publishDate 2009-03-01
description <p>Abstract</p> <p>The increase in adamantine resistance in influenza A (H3N2) and the emergence of oseltamivir resistance in influenza A (H1N1) has necessitated the use of rapid methodologies to detect influenza subtype. The purpose of this study was to evaluate the CombiMatrix influenza detection system compared to the FDA approved Luminex Respiratory virus panel (RVP) assay for influenza A subtyping. Verification of the CombiMatrix influenza detection system was carried out using the Luminex RVP assay as a reference method. A limit of detection (LOD) series was performed using the Luminex and CombiMatrix systems with both influenza A H3N2 and H1N1 viruses. Seventy-five clinical specimens were used in the study. Of these, 16 were influenza A (H3N2) positive and five were influenza A (H1N1) positive. Fifty-four specimens were influenza A negative or "no call" (inconclusive) or could not be subtyped. The LOD of the Luminex RVP assay was found to be 0.3 TCID<sub>50</sub>s/mL for influenza A (H3N2) and 16 TCID<sub>50</sub>s/mL for influenza A (H1N1). The LOD of the CombiMatrix influenza detection system was 200 TCID<sub>50</sub>s/mL for influenza A (H3N2) and 16 000 TCID<sub>50</sub>s/mL for influenza A (H1N1). The sensitivity of the CombiMatrix influenza detection system was 95.2% and the specificity was 100%. The CombiMatrix influenza detection system is an effective methodology for influenza A subtype analysis, specifically in laboratories with a constrained budget or limited molecular capabilities.</p>
url http://www.virologyj.com/content/6/1/37
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