Detection of Jaguar (Panthera onca) From Genetic Material in Drinking Water

Jaguar (Panthera onca) are of conservation concern and occur at very low densities in the northern portion of their range in northern Mexico and the southwestern United States. Environmental DNA sampling to detect genetic material from drinking water may be an effective approach for jaguar detection...

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Main Authors: Taylor M. Wilcox, Anthony Caragiulo, Joseph C. Dysthe, Thomas W. Franklin, Daniel H. Mason, Kevin S. McKelvey, Katherine E. Zarn, Michael K. Schwartz
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-05-01
Series:Frontiers in Ecology and Evolution
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fevo.2021.613200/full
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spelling doaj-973beca9b6944ee8904f1c556500f4182021-05-13T04:24:19ZengFrontiers Media S.A.Frontiers in Ecology and Evolution2296-701X2021-05-01910.3389/fevo.2021.613200613200Detection of Jaguar (Panthera onca) From Genetic Material in Drinking WaterTaylor M. Wilcox0Anthony Caragiulo1Joseph C. Dysthe2Thomas W. Franklin3Daniel H. Mason4Kevin S. McKelvey5Katherine E. Zarn6Michael K. Schwartz7National Genomics Center for Wildlife and Fish Conservation, Rocky Mountain Research Station, USDA Forest Service, Missoula, MT, United StatesSackler Institute for Comparative Genomics, American Museum of Natural History, New York, NY, United StatesNational Genomics Center for Wildlife and Fish Conservation, Rocky Mountain Research Station, USDA Forest Service, Missoula, MT, United StatesNational Genomics Center for Wildlife and Fish Conservation, Rocky Mountain Research Station, USDA Forest Service, Missoula, MT, United StatesNational Genomics Center for Wildlife and Fish Conservation, Rocky Mountain Research Station, USDA Forest Service, Missoula, MT, United StatesNational Genomics Center for Wildlife and Fish Conservation, Rocky Mountain Research Station, USDA Forest Service, Missoula, MT, United StatesNational Genomics Center for Wildlife and Fish Conservation, Rocky Mountain Research Station, USDA Forest Service, Missoula, MT, United StatesNational Genomics Center for Wildlife and Fish Conservation, Rocky Mountain Research Station, USDA Forest Service, Missoula, MT, United StatesJaguar (Panthera onca) are of conservation concern and occur at very low densities in the northern portion of their range in northern Mexico and the southwestern United States. Environmental DNA sampling to detect genetic material from drinking water may be an effective approach for jaguar detection in these arid landscapes. Here we develop a qPCR assay for the detection of jaguar mitochondrial DNA, show that large quantities of DNA (mean 66,820 copies/L) can be found in the drinking water of captive animals, and observe detectable levels of DNA (80 copies/L) in a wild habitat with known jaguar populations. We suggest that environmental DNA sampling may represent a useful, complementary sampling tool for detection of rare jaguars, although effective application would require careful consideration of DNA persistence time in the environment.https://www.frontiersin.org/articles/10.3389/fevo.2021.613200/fullenvironmental DNAeDNAnon-invasive geneticswildlifemonitoring
collection DOAJ
language English
format Article
sources DOAJ
author Taylor M. Wilcox
Anthony Caragiulo
Joseph C. Dysthe
Thomas W. Franklin
Daniel H. Mason
Kevin S. McKelvey
Katherine E. Zarn
Michael K. Schwartz
spellingShingle Taylor M. Wilcox
Anthony Caragiulo
Joseph C. Dysthe
Thomas W. Franklin
Daniel H. Mason
Kevin S. McKelvey
Katherine E. Zarn
Michael K. Schwartz
Detection of Jaguar (Panthera onca) From Genetic Material in Drinking Water
Frontiers in Ecology and Evolution
environmental DNA
eDNA
non-invasive genetics
wildlife
monitoring
author_facet Taylor M. Wilcox
Anthony Caragiulo
Joseph C. Dysthe
Thomas W. Franklin
Daniel H. Mason
Kevin S. McKelvey
Katherine E. Zarn
Michael K. Schwartz
author_sort Taylor M. Wilcox
title Detection of Jaguar (Panthera onca) From Genetic Material in Drinking Water
title_short Detection of Jaguar (Panthera onca) From Genetic Material in Drinking Water
title_full Detection of Jaguar (Panthera onca) From Genetic Material in Drinking Water
title_fullStr Detection of Jaguar (Panthera onca) From Genetic Material in Drinking Water
title_full_unstemmed Detection of Jaguar (Panthera onca) From Genetic Material in Drinking Water
title_sort detection of jaguar (panthera onca) from genetic material in drinking water
publisher Frontiers Media S.A.
series Frontiers in Ecology and Evolution
issn 2296-701X
publishDate 2021-05-01
description Jaguar (Panthera onca) are of conservation concern and occur at very low densities in the northern portion of their range in northern Mexico and the southwestern United States. Environmental DNA sampling to detect genetic material from drinking water may be an effective approach for jaguar detection in these arid landscapes. Here we develop a qPCR assay for the detection of jaguar mitochondrial DNA, show that large quantities of DNA (mean 66,820 copies/L) can be found in the drinking water of captive animals, and observe detectable levels of DNA (80 copies/L) in a wild habitat with known jaguar populations. We suggest that environmental DNA sampling may represent a useful, complementary sampling tool for detection of rare jaguars, although effective application would require careful consideration of DNA persistence time in the environment.
topic environmental DNA
eDNA
non-invasive genetics
wildlife
monitoring
url https://www.frontiersin.org/articles/10.3389/fevo.2021.613200/full
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