Discovery and Proof-of-Concept Study of Nuclease Activity as a Novel Biomarker for Breast Cancer Tumors

Breast cancer is one of the most common pathologies diagnosed in the clinical practice. Despite major advancements in diagnostic approaches, there is no widely accepted biomarker in the clinical practice that can diagnose breast malignancy. Confirmatory diagnosis still relies on the pathological ass...

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Main Authors: Luiza I. Hernandez, Marcos J. Araúzo-Bravo, Daniela Gerovska, Ricardo Rezola Solaun, Isabel Machado, Alien Balian, Juliana Botero, Tania Jiménez, Olaia Zuriarrain Bergara, Lide Larburu Gurruchaga, Ander Urruticoechea, Frank J. Hernandez
Format: Article
Language:English
Published: MDPI AG 2021-01-01
Series:Cancers
Subjects:
Online Access:https://www.mdpi.com/2072-6694/13/2/276
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spelling doaj-97f3b5df2d694254b07ed63d8f50e90a2021-01-14T00:04:13ZengMDPI AGCancers2072-66942021-01-011327627610.3390/cancers13020276Discovery and Proof-of-Concept Study of Nuclease Activity as a Novel Biomarker for Breast Cancer TumorsLuiza I. Hernandez0Marcos J. Araúzo-Bravo1Daniela Gerovska2Ricardo Rezola Solaun3Isabel Machado4Alien Balian5Juliana Botero6Tania Jiménez7Olaia Zuriarrain Bergara8Lide Larburu Gurruchaga9Ander Urruticoechea10Frank J. Hernandez11SOMAprobes S.L, Science and Technology Park of Gipuzkoa, 20009 San Sebastian, SpainDepartment of Cell and Developmental Biology, Max Planck Institute for Molecular Biomedicine, 48149 Münster, GermanyComputational Biology and Systems Biomedicine, Biodonostia Health Research Institute, 20014 San Sebastian, SpainDepartment of Pathology, Onkologikoa Foundation, 20014 San Sebastián, SpainSOMAprobes S.L, Science and Technology Park of Gipuzkoa, 20009 San Sebastian, SpainWallenberg Center for Molecular Medicine (WCMM), 58185 Linköping, SwedenSOMAprobes S.L, Science and Technology Park of Gipuzkoa, 20009 San Sebastian, SpainSOMAprobes S.L, Science and Technology Park of Gipuzkoa, 20009 San Sebastian, SpainDepartment of Oncology, Onkologikoa Foundation, 20014 San Sebastián, SpainDepartment of Oncology, Onkologikoa Foundation, 20014 San Sebastián, SpainDepartment of Oncology, Onkologikoa Foundation, 20014 San Sebastián, SpainWallenberg Center for Molecular Medicine (WCMM), 58185 Linköping, SwedenBreast cancer is one of the most common pathologies diagnosed in the clinical practice. Despite major advancements in diagnostic approaches, there is no widely accepted biomarker in the clinical practice that can diagnose breast malignancy. Confirmatory diagnosis still relies on the pathological assessment of tissue biopsies by expert pathologists. Thus, there is an unmet need for new types of biomarkers and novel platform technologies that can be easily and robustly integrated into the clinic and that can assist pathologists. Herein, we show that nuclease activity associated to malignant tumors can be used as a novel biomarker in breast cancer, which can be detected via specific degradation of nucleic acid probes. In this study we have identified a set of three chemically modified nucleic acid probes that can diagnose malignancy in biopsy samples with high accuracy (89%), sensitivity (82%) and specificity (94%). This work represents a breakthrough for the potential clinical use of nuclease activity as biomarker, which can be detected via nucleic acids probes, for the clinical diagnosis of malignancy in breast tissue biopsies. This platform technology could be readily implemented into the clinic as adjunct to histopathological diagnostic.https://www.mdpi.com/2072-6694/13/2/276breast cancernucleic acid probescancer diagnosticsnuclease activitybiomarkers
collection DOAJ
language English
format Article
sources DOAJ
author Luiza I. Hernandez
Marcos J. Araúzo-Bravo
Daniela Gerovska
Ricardo Rezola Solaun
Isabel Machado
Alien Balian
Juliana Botero
Tania Jiménez
Olaia Zuriarrain Bergara
Lide Larburu Gurruchaga
Ander Urruticoechea
Frank J. Hernandez
spellingShingle Luiza I. Hernandez
Marcos J. Araúzo-Bravo
Daniela Gerovska
Ricardo Rezola Solaun
Isabel Machado
Alien Balian
Juliana Botero
Tania Jiménez
Olaia Zuriarrain Bergara
Lide Larburu Gurruchaga
Ander Urruticoechea
Frank J. Hernandez
Discovery and Proof-of-Concept Study of Nuclease Activity as a Novel Biomarker for Breast Cancer Tumors
Cancers
breast cancer
nucleic acid probes
cancer diagnostics
nuclease activity
biomarkers
author_facet Luiza I. Hernandez
Marcos J. Araúzo-Bravo
Daniela Gerovska
Ricardo Rezola Solaun
Isabel Machado
Alien Balian
Juliana Botero
Tania Jiménez
Olaia Zuriarrain Bergara
Lide Larburu Gurruchaga
Ander Urruticoechea
Frank J. Hernandez
author_sort Luiza I. Hernandez
title Discovery and Proof-of-Concept Study of Nuclease Activity as a Novel Biomarker for Breast Cancer Tumors
title_short Discovery and Proof-of-Concept Study of Nuclease Activity as a Novel Biomarker for Breast Cancer Tumors
title_full Discovery and Proof-of-Concept Study of Nuclease Activity as a Novel Biomarker for Breast Cancer Tumors
title_fullStr Discovery and Proof-of-Concept Study of Nuclease Activity as a Novel Biomarker for Breast Cancer Tumors
title_full_unstemmed Discovery and Proof-of-Concept Study of Nuclease Activity as a Novel Biomarker for Breast Cancer Tumors
title_sort discovery and proof-of-concept study of nuclease activity as a novel biomarker for breast cancer tumors
publisher MDPI AG
series Cancers
issn 2072-6694
publishDate 2021-01-01
description Breast cancer is one of the most common pathologies diagnosed in the clinical practice. Despite major advancements in diagnostic approaches, there is no widely accepted biomarker in the clinical practice that can diagnose breast malignancy. Confirmatory diagnosis still relies on the pathological assessment of tissue biopsies by expert pathologists. Thus, there is an unmet need for new types of biomarkers and novel platform technologies that can be easily and robustly integrated into the clinic and that can assist pathologists. Herein, we show that nuclease activity associated to malignant tumors can be used as a novel biomarker in breast cancer, which can be detected via specific degradation of nucleic acid probes. In this study we have identified a set of three chemically modified nucleic acid probes that can diagnose malignancy in biopsy samples with high accuracy (89%), sensitivity (82%) and specificity (94%). This work represents a breakthrough for the potential clinical use of nuclease activity as biomarker, which can be detected via nucleic acids probes, for the clinical diagnosis of malignancy in breast tissue biopsies. This platform technology could be readily implemented into the clinic as adjunct to histopathological diagnostic.
topic breast cancer
nucleic acid probes
cancer diagnostics
nuclease activity
biomarkers
url https://www.mdpi.com/2072-6694/13/2/276
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