Application of Laser-Induced Fluorescence in Functional Studies of Photosynthetic Biofilms

Biofilms are a ubiquitous form of life for microorganisms. Photosynthetic biofilms such as microphytobenthos (MPB) and biological soil crusts (BSC) play a relevant ecological role in aquatic and terrestrial ecosystems, respectively. On the other hand, photosynthetic epilithic biofilms (PEB) are majo...

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Main Authors: Jorge Marques da Silva, Andrei Borissovitch Utkin
Format: Article
Language:English
Published: MDPI AG 2018-11-01
Series:Processes
Subjects:
Online Access:https://www.mdpi.com/2227-9717/6/11/227
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spelling doaj-97f89426f8664e3cac4643c13d042e6d2020-11-24T22:11:21ZengMDPI AGProcesses2227-97172018-11-0161122710.3390/pr6110227pr6110227Application of Laser-Induced Fluorescence in Functional Studies of Photosynthetic BiofilmsJorge Marques da Silva0Andrei Borissovitch Utkin1Department of Plant Biology and Biosystems and Integrative Sciences Institute (BioISI), Faculty of Sciences, Universidade de Lisboa, Campo Grande, 1749-016 Lisbon, PortugalINOV INESC Inovação, Rua Alves Redol 9, 1000-029 Lisbon, PortugalBiofilms are a ubiquitous form of life for microorganisms. Photosynthetic biofilms such as microphytobenthos (MPB) and biological soil crusts (BSC) play a relevant ecological role in aquatic and terrestrial ecosystems, respectively. On the other hand, photosynthetic epilithic biofilms (PEB) are major players in the microbial-induced decay of stone structures of cultural heritage. The use of fluorescence techniques, namely, pulse-amplitude-modulated fluorometry, was crucial to understanding the photophysiology of these microbial communities, since they made it possible to measure biofilms&#8217; photosynthetic activity without disturbing their delicate spatial organization within sediments or soils. The use of laser-induced fluorescence (LIF) added further technical advantages, enabling measurements to be made at a considerable distance from the samples, and under daylight. In this <i>Perspective</i>, we present state-of-the-art LIF techniques, show examples of the application of LIF to MPB and present exploratory results of LIF application to BSC, as well as to PEB colonizing stone structures of cultural heritage. Thereafter, we discuss the perspectives of LIF utilization in environmental research and monitoring, in cultural heritage conservation and assessment, and in biotechnological applications of photosynthetic biofilms.https://www.mdpi.com/2227-9717/6/11/227fluorescencespectroscopylaserbiofilmphotosynthesis
collection DOAJ
language English
format Article
sources DOAJ
author Jorge Marques da Silva
Andrei Borissovitch Utkin
spellingShingle Jorge Marques da Silva
Andrei Borissovitch Utkin
Application of Laser-Induced Fluorescence in Functional Studies of Photosynthetic Biofilms
Processes
fluorescence
spectroscopy
laser
biofilm
photosynthesis
author_facet Jorge Marques da Silva
Andrei Borissovitch Utkin
author_sort Jorge Marques da Silva
title Application of Laser-Induced Fluorescence in Functional Studies of Photosynthetic Biofilms
title_short Application of Laser-Induced Fluorescence in Functional Studies of Photosynthetic Biofilms
title_full Application of Laser-Induced Fluorescence in Functional Studies of Photosynthetic Biofilms
title_fullStr Application of Laser-Induced Fluorescence in Functional Studies of Photosynthetic Biofilms
title_full_unstemmed Application of Laser-Induced Fluorescence in Functional Studies of Photosynthetic Biofilms
title_sort application of laser-induced fluorescence in functional studies of photosynthetic biofilms
publisher MDPI AG
series Processes
issn 2227-9717
publishDate 2018-11-01
description Biofilms are a ubiquitous form of life for microorganisms. Photosynthetic biofilms such as microphytobenthos (MPB) and biological soil crusts (BSC) play a relevant ecological role in aquatic and terrestrial ecosystems, respectively. On the other hand, photosynthetic epilithic biofilms (PEB) are major players in the microbial-induced decay of stone structures of cultural heritage. The use of fluorescence techniques, namely, pulse-amplitude-modulated fluorometry, was crucial to understanding the photophysiology of these microbial communities, since they made it possible to measure biofilms&#8217; photosynthetic activity without disturbing their delicate spatial organization within sediments or soils. The use of laser-induced fluorescence (LIF) added further technical advantages, enabling measurements to be made at a considerable distance from the samples, and under daylight. In this <i>Perspective</i>, we present state-of-the-art LIF techniques, show examples of the application of LIF to MPB and present exploratory results of LIF application to BSC, as well as to PEB colonizing stone structures of cultural heritage. Thereafter, we discuss the perspectives of LIF utilization in environmental research and monitoring, in cultural heritage conservation and assessment, and in biotechnological applications of photosynthetic biofilms.
topic fluorescence
spectroscopy
laser
biofilm
photosynthesis
url https://www.mdpi.com/2227-9717/6/11/227
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AT andreiborissovitchutkin applicationoflaserinducedfluorescenceinfunctionalstudiesofphotosyntheticbiofilms
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