Bumblebee (Hymenoptera: Apidae) sample storage for a posteriori molecular studies: Interactions between sample storage and DNA-extraction techniques

A global decline in pollinator abundance and diversity has demanded increased research attention to the ecology and genetics of bumblebees. However, as progressively more restrictions are placed on sampling for insects, researchers are increasingly obliged to use archival specimens collected for pur...

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Main Authors: António S. MOREIRA, Finbarr G. HORGAN, Tomás E. MURRAY, Thomais KAKOULI-DUARTE
Format: Article
Language:English
Published: Institute of Entomology, Biology Centre, Czech Academy of Science 2013-07-01
Series:European Journal of Entomology
Subjects:
Online Access:https://www.eje.cz/artkey/eje-201303-0005_Bumblebee_Hymenoptera_Apidae_sample_storage_for_a_posteriori_molecular_studies_Interactions_between_sample.php
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spelling doaj-98ae921b1bfc4467ab9552e0eaf4bea82021-04-16T20:35:14ZengInstitute of Entomology, Biology Centre, Czech Academy of ScienceEuropean Journal of Entomology1210-57591802-88292013-07-01110341942510.14411/eje.2013.056eje-201303-0005Bumblebee (Hymenoptera: Apidae) sample storage for a posteriori molecular studies: Interactions between sample storage and DNA-extraction techniquesAntónio S. MOREIRA0Finbarr G. HORGAN1Tomás E. MURRAY2Thomais KAKOULI-DUARTE3Institute of Technology Carlow, Kilkenny Road, Carlow, County Carlow, Ireland; e-mails: Antonio.Moreira@itcarlow.ie; thomae.kakouli@itcarlow.ieTEAGASC Agri-Research and Advisory Authority, Oak Park Research Centre, Carlow, County Carlow, IrelandTEAGASC Agri-Research and Advisory Authority, Oak Park Research Centre, Carlow, County Carlow, IrelandInstitute of Technology Carlow, Kilkenny Road, Carlow, County Carlow, Ireland; e-mails: Antonio.Moreira@itcarlow.ie; thomae.kakouli@itcarlow.ieA global decline in pollinator abundance and diversity has demanded increased research attention to the ecology and genetics of bumblebees. However, as progressively more restrictions are placed on sampling for insects, researchers are increasingly obliged to use archival specimens collected for purposes other than genetic analyses. In this study we assessed the suitability, for population genetic studies, of popular, low-cost methods for preservation and storage of bumblebee specimens. Specimens of Bombus terrestris L. were held under six storage regimes for up to two years. DNA was extracted from the samples using three extraction protocols and the quality of the DNA was examined using PCR amplification of a mitochondrial and a nuclear gene. All extraction and storage methods provided sufficient DNA for successful PCR amplification. However, samples preserved in acetone or at freezing temperatures yielded the highest DNA concentrations. DNA yields from pinned specimens at room temperature declined over time, particularly when using standard extraction techniques. DNA concentrations were significantly lower from specimens preserved in 70% ethanol compared to all other extraction techniques and declined linearly over the two years of storage. These results indicate that two of the most popular insect storage methods (pinning and storage in ethanol) should be avoided for the long-term preservation of genetic material for future studies. We suggest that optimal insect preservation methods should be incorporated into research protocols in order to best capitalise on limited collection opportunities.https://www.eje.cz/artkey/eje-201303-0005_Bumblebee_Hymenoptera_Apidae_sample_storage_for_a_posteriori_molecular_studies_Interactions_between_sample.phphymenopteraapidaebombus terrestrisacetonecommercial kitdna qualityentomological pinsfreezingphenol-extraction
collection DOAJ
language English
format Article
sources DOAJ
author António S. MOREIRA
Finbarr G. HORGAN
Tomás E. MURRAY
Thomais KAKOULI-DUARTE
spellingShingle António S. MOREIRA
Finbarr G. HORGAN
Tomás E. MURRAY
Thomais KAKOULI-DUARTE
Bumblebee (Hymenoptera: Apidae) sample storage for a posteriori molecular studies: Interactions between sample storage and DNA-extraction techniques
European Journal of Entomology
hymenoptera
apidae
bombus terrestris
acetone
commercial kit
dna quality
entomological pins
freezing
phenol-extraction
author_facet António S. MOREIRA
Finbarr G. HORGAN
Tomás E. MURRAY
Thomais KAKOULI-DUARTE
author_sort António S. MOREIRA
title Bumblebee (Hymenoptera: Apidae) sample storage for a posteriori molecular studies: Interactions between sample storage and DNA-extraction techniques
title_short Bumblebee (Hymenoptera: Apidae) sample storage for a posteriori molecular studies: Interactions between sample storage and DNA-extraction techniques
title_full Bumblebee (Hymenoptera: Apidae) sample storage for a posteriori molecular studies: Interactions between sample storage and DNA-extraction techniques
title_fullStr Bumblebee (Hymenoptera: Apidae) sample storage for a posteriori molecular studies: Interactions between sample storage and DNA-extraction techniques
title_full_unstemmed Bumblebee (Hymenoptera: Apidae) sample storage for a posteriori molecular studies: Interactions between sample storage and DNA-extraction techniques
title_sort bumblebee (hymenoptera: apidae) sample storage for a posteriori molecular studies: interactions between sample storage and dna-extraction techniques
publisher Institute of Entomology, Biology Centre, Czech Academy of Science
series European Journal of Entomology
issn 1210-5759
1802-8829
publishDate 2013-07-01
description A global decline in pollinator abundance and diversity has demanded increased research attention to the ecology and genetics of bumblebees. However, as progressively more restrictions are placed on sampling for insects, researchers are increasingly obliged to use archival specimens collected for purposes other than genetic analyses. In this study we assessed the suitability, for population genetic studies, of popular, low-cost methods for preservation and storage of bumblebee specimens. Specimens of Bombus terrestris L. were held under six storage regimes for up to two years. DNA was extracted from the samples using three extraction protocols and the quality of the DNA was examined using PCR amplification of a mitochondrial and a nuclear gene. All extraction and storage methods provided sufficient DNA for successful PCR amplification. However, samples preserved in acetone or at freezing temperatures yielded the highest DNA concentrations. DNA yields from pinned specimens at room temperature declined over time, particularly when using standard extraction techniques. DNA concentrations were significantly lower from specimens preserved in 70% ethanol compared to all other extraction techniques and declined linearly over the two years of storage. These results indicate that two of the most popular insect storage methods (pinning and storage in ethanol) should be avoided for the long-term preservation of genetic material for future studies. We suggest that optimal insect preservation methods should be incorporated into research protocols in order to best capitalise on limited collection opportunities.
topic hymenoptera
apidae
bombus terrestris
acetone
commercial kit
dna quality
entomological pins
freezing
phenol-extraction
url https://www.eje.cz/artkey/eje-201303-0005_Bumblebee_Hymenoptera_Apidae_sample_storage_for_a_posteriori_molecular_studies_Interactions_between_sample.php
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