Identification and Characterization of MtoA: a Decaheme c-Type Cytochrome of the Neutrophilic Fe(II)-oxidizing Bacterium Sideroxydans lithotrophicus ES-1

The Gram-negative bacterium Sideroxydans lithotrophicus ES-1 (ES-1) grows on FeCO3 or FeS at oxic-anoxic interfaces at circumneutral pH, and the ES-1-mediated Fe(II) oxidation occurs extracellularly. However, the molecular mechanisms underlying ES-1’s ability to oxidize Fe(II) remain unknown. Survey...

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Main Authors: Juan eLiu, Zheming eWang, Sara M Belchik, Marcus J Edwards, Chongxuan eLiu, David W Kennedy, Eric D Merkley, Mary S Lipton, Julea N Butt, David J Richardson, John M Zachara, James K Fredrickson, Kevin M Rosso, Liang eShi
Format: Article
Language:English
Published: Frontiers Media S.A. 2012-02-01
Series:Frontiers in Microbiology
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Online Access:http://journal.frontiersin.org/Journal/10.3389/fmicb.2012.00037/full
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spelling doaj-9938af60172444f6956d62f1a431548a2020-11-24T23:41:31ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2012-02-01310.3389/fmicb.2012.0003717845Identification and Characterization of MtoA: a Decaheme c-Type Cytochrome of the Neutrophilic Fe(II)-oxidizing Bacterium Sideroxydans lithotrophicus ES-1Juan eLiu0Zheming eWang1Sara M Belchik2Marcus J Edwards3Chongxuan eLiu4David W Kennedy5Eric D Merkley6Mary S Lipton7Julea N Butt8David J Richardson9John M Zachara10James K Fredrickson11Kevin M Rosso12Liang eShi13Pacific Northwest National LaboratoryPacific Northwest National LaboratoryPacific Northwest National LaboratoryUniversity of East AngliaPacific Northwest National LaboratoryPacific Northwest National LaboratoryPacific Northwest National LaboratoryPacific Northwest National LaboratoryUniversity of East AngliaUniversity of East AngliaPacific Northwest National LaboratoryPacific Northwest National LaboratoryPacific Northwest National LaboratoryPacific Northwest National LaboratoryThe Gram-negative bacterium Sideroxydans lithotrophicus ES-1 (ES-1) grows on FeCO3 or FeS at oxic-anoxic interfaces at circumneutral pH, and the ES-1-mediated Fe(II) oxidation occurs extracellularly. However, the molecular mechanisms underlying ES-1’s ability to oxidize Fe(II) remain unknown. Survey of the ES-1 genome for candidate genes for microbial extracellular Fe(II) oxidation revealed that it contained a three-gene cluster encoding homologues of MtrA, MtrB and CymA of Shewanella oneidensis MR-1 (MR-1) that are involved in extracellular Fe(III) reduction. Homologues of MtrA and MtrB were also involved in extracellular Fe(II) oxidation by Rhodopseudomonas palustris TIE-1. To distinguish them from those found in MR-1, the identified homologues were named MtoAB and CymAES-1. Cloned mtoA partially complemented an MR-1 mutant without MtrA with regards to ferrihydrite reduction. Characterization of purified MtoA showed that it was a decaheme c-type cytochrome and oxidized soluble Fe(II). Oxidation of Fe(II) by MtoA was pH- and Fe(II)-complexing ligand-dependent. Under conditions tested, MtoA oxidized Fe(II) from pH 7-9 with the optimal rate at pH 9. MtoA oxidized Fe(II) complexed with different ligands at different rates. The reaction rates followed the order Fe(II)Cl2 > Fe(II)-citrate > Fe(II)-NTA > Fe(II)-EDTA with the second-order rate constants ranging from 6.3 × 10-3 μM-1s-1 for oxidation of Fe(II)Cl2 to 1.0 × 10-3 μM-1s-1 for oxidation of Fe(II)-EDTA. Thermodynamic modeling shows that redox reaction rates for the different Fe(II)-complexes correlated with their respective estimated reaction-free energies. Collectively, these results demonstrate that MtoA is a functional Fe(II)-oxidizing protein and, by working in concert with MtoB and CymAES 1, may oxidize Fe(II) at the bacterial surface and transfer released electrons across the bacterial cell envelope to the quinone pool in the inner membrane during extracellular Fe(II) oxidation by ES-1.http://journal.frontiersin.org/Journal/10.3389/fmicb.2012.00037/fulldecaheme c-type cytochrome MtoAextracellular Fe(II) oxidationligand complexationpH-dependentSideroxydans lithotrophicus ES-1
collection DOAJ
language English
format Article
sources DOAJ
author Juan eLiu
Zheming eWang
Sara M Belchik
Marcus J Edwards
Chongxuan eLiu
David W Kennedy
Eric D Merkley
Mary S Lipton
Julea N Butt
David J Richardson
John M Zachara
James K Fredrickson
Kevin M Rosso
Liang eShi
spellingShingle Juan eLiu
Zheming eWang
Sara M Belchik
Marcus J Edwards
Chongxuan eLiu
David W Kennedy
Eric D Merkley
Mary S Lipton
Julea N Butt
David J Richardson
John M Zachara
James K Fredrickson
Kevin M Rosso
Liang eShi
Identification and Characterization of MtoA: a Decaheme c-Type Cytochrome of the Neutrophilic Fe(II)-oxidizing Bacterium Sideroxydans lithotrophicus ES-1
Frontiers in Microbiology
decaheme c-type cytochrome MtoA
extracellular Fe(II) oxidation
ligand complexation
pH-dependent
Sideroxydans lithotrophicus ES-1
author_facet Juan eLiu
Zheming eWang
Sara M Belchik
Marcus J Edwards
Chongxuan eLiu
David W Kennedy
Eric D Merkley
Mary S Lipton
Julea N Butt
David J Richardson
John M Zachara
James K Fredrickson
Kevin M Rosso
Liang eShi
author_sort Juan eLiu
title Identification and Characterization of MtoA: a Decaheme c-Type Cytochrome of the Neutrophilic Fe(II)-oxidizing Bacterium Sideroxydans lithotrophicus ES-1
title_short Identification and Characterization of MtoA: a Decaheme c-Type Cytochrome of the Neutrophilic Fe(II)-oxidizing Bacterium Sideroxydans lithotrophicus ES-1
title_full Identification and Characterization of MtoA: a Decaheme c-Type Cytochrome of the Neutrophilic Fe(II)-oxidizing Bacterium Sideroxydans lithotrophicus ES-1
title_fullStr Identification and Characterization of MtoA: a Decaheme c-Type Cytochrome of the Neutrophilic Fe(II)-oxidizing Bacterium Sideroxydans lithotrophicus ES-1
title_full_unstemmed Identification and Characterization of MtoA: a Decaheme c-Type Cytochrome of the Neutrophilic Fe(II)-oxidizing Bacterium Sideroxydans lithotrophicus ES-1
title_sort identification and characterization of mtoa: a decaheme c-type cytochrome of the neutrophilic fe(ii)-oxidizing bacterium sideroxydans lithotrophicus es-1
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2012-02-01
description The Gram-negative bacterium Sideroxydans lithotrophicus ES-1 (ES-1) grows on FeCO3 or FeS at oxic-anoxic interfaces at circumneutral pH, and the ES-1-mediated Fe(II) oxidation occurs extracellularly. However, the molecular mechanisms underlying ES-1’s ability to oxidize Fe(II) remain unknown. Survey of the ES-1 genome for candidate genes for microbial extracellular Fe(II) oxidation revealed that it contained a three-gene cluster encoding homologues of MtrA, MtrB and CymA of Shewanella oneidensis MR-1 (MR-1) that are involved in extracellular Fe(III) reduction. Homologues of MtrA and MtrB were also involved in extracellular Fe(II) oxidation by Rhodopseudomonas palustris TIE-1. To distinguish them from those found in MR-1, the identified homologues were named MtoAB and CymAES-1. Cloned mtoA partially complemented an MR-1 mutant without MtrA with regards to ferrihydrite reduction. Characterization of purified MtoA showed that it was a decaheme c-type cytochrome and oxidized soluble Fe(II). Oxidation of Fe(II) by MtoA was pH- and Fe(II)-complexing ligand-dependent. Under conditions tested, MtoA oxidized Fe(II) from pH 7-9 with the optimal rate at pH 9. MtoA oxidized Fe(II) complexed with different ligands at different rates. The reaction rates followed the order Fe(II)Cl2 > Fe(II)-citrate > Fe(II)-NTA > Fe(II)-EDTA with the second-order rate constants ranging from 6.3 × 10-3 μM-1s-1 for oxidation of Fe(II)Cl2 to 1.0 × 10-3 μM-1s-1 for oxidation of Fe(II)-EDTA. Thermodynamic modeling shows that redox reaction rates for the different Fe(II)-complexes correlated with their respective estimated reaction-free energies. Collectively, these results demonstrate that MtoA is a functional Fe(II)-oxidizing protein and, by working in concert with MtoB and CymAES 1, may oxidize Fe(II) at the bacterial surface and transfer released electrons across the bacterial cell envelope to the quinone pool in the inner membrane during extracellular Fe(II) oxidation by ES-1.
topic decaheme c-type cytochrome MtoA
extracellular Fe(II) oxidation
ligand complexation
pH-dependent
Sideroxydans lithotrophicus ES-1
url http://journal.frontiersin.org/Journal/10.3389/fmicb.2012.00037/full
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