Reproducible color gamut of hematoxylin and eosin stained images in standard color spaces

A whole-slide imaging (WSI) system is a digital color imaging system used in digital pathology with the potential to substitute the conventional light microscope. A WSI system digitalizes a glass slide by converting the optical image to digital data with a scanner and then converting the digital dat...

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Main Author: Wei- Chung Cheng
Format: Article
Language:English
Published: Wolters Kluwer Medknow Publications 2020-01-01
Series:Journal of Pathology Informatics
Subjects:
Online Access:http://www.jpathinformatics.org/article.asp?issn=2153-3539;year=2020;volume=11;issue=1;spage=36;epage=36;aulast=Cheng
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spelling doaj-9a0f2b7533014886925d78c64c6c37e12021-01-08T04:20:34ZengWolters Kluwer Medknow PublicationsJournal of Pathology Informatics2153-35392153-35392020-01-01111363610.4103/jpi.jpi_59_19Reproducible color gamut of hematoxylin and eosin stained images in standard color spacesWei- Chung ChengA whole-slide imaging (WSI) system is a digital color imaging system used in digital pathology with the potential to substitute the conventional light microscope. A WSI system digitalizes a glass slide by converting the optical image to digital data with a scanner and then converting the digital data back to the optical image with a display. During the digital-to-optical or optical-to-digital conversion, a color space is required to define the mapping between the digital domain and the optical domain so that the numerical data of each color pixel can be interpreted meaningfully. Unfortunately, many current WSI products do not specify the designated color space clearly, which leaves the user using the universally default color space, sRGB. sRGB is a legacy color space that has a limited color gamut, which is known to be unable to reproduce all color shades present in histology slides. In this work, experiments were conducted to quantitatively investigate the limitation of the sRGB color space used in WSI systems. Eight hematoxylin and eosin (H and E)-stained tissue samples, including human bladder, brain, breast, colon, kidney, liver, lung, and uterus, were measured with a multispectral imaging system to obtain the true colors at the pixel level. The measured color truth of each pixel was converted into the standard CIELAB color space to test whether it was within the color gamut of the sRGB color space. Experiment results show that all the eight images have a portion of pixels outside the sRGB color gamut. In the worst-case scenario, the bladder sample, about 35% of the image exceeded the sRGB color gamut. The results suggest that the sRGB color space is inadequate for WSI scanners to encode H and E-stained whole-slide images, and an sRGB display may have insufficient color gamut for displaying H and E-stained histology images.http://www.jpathinformatics.org/article.asp?issn=2153-3539;year=2020;volume=11;issue=1;spage=36;epage=36;aulast=Chengadobe rgbcolor gamutcolor managementcolor medical imagingcolor spacedigital pathologyhematoxylin and eosin stainromm rgbsrgbwhole-slide imaging
collection DOAJ
language English
format Article
sources DOAJ
author Wei- Chung Cheng
spellingShingle Wei- Chung Cheng
Reproducible color gamut of hematoxylin and eosin stained images in standard color spaces
Journal of Pathology Informatics
adobe rgb
color gamut
color management
color medical imaging
color space
digital pathology
hematoxylin and eosin stain
romm rgb
srgb
whole-slide imaging
author_facet Wei- Chung Cheng
author_sort Wei- Chung Cheng
title Reproducible color gamut of hematoxylin and eosin stained images in standard color spaces
title_short Reproducible color gamut of hematoxylin and eosin stained images in standard color spaces
title_full Reproducible color gamut of hematoxylin and eosin stained images in standard color spaces
title_fullStr Reproducible color gamut of hematoxylin and eosin stained images in standard color spaces
title_full_unstemmed Reproducible color gamut of hematoxylin and eosin stained images in standard color spaces
title_sort reproducible color gamut of hematoxylin and eosin stained images in standard color spaces
publisher Wolters Kluwer Medknow Publications
series Journal of Pathology Informatics
issn 2153-3539
2153-3539
publishDate 2020-01-01
description A whole-slide imaging (WSI) system is a digital color imaging system used in digital pathology with the potential to substitute the conventional light microscope. A WSI system digitalizes a glass slide by converting the optical image to digital data with a scanner and then converting the digital data back to the optical image with a display. During the digital-to-optical or optical-to-digital conversion, a color space is required to define the mapping between the digital domain and the optical domain so that the numerical data of each color pixel can be interpreted meaningfully. Unfortunately, many current WSI products do not specify the designated color space clearly, which leaves the user using the universally default color space, sRGB. sRGB is a legacy color space that has a limited color gamut, which is known to be unable to reproduce all color shades present in histology slides. In this work, experiments were conducted to quantitatively investigate the limitation of the sRGB color space used in WSI systems. Eight hematoxylin and eosin (H and E)-stained tissue samples, including human bladder, brain, breast, colon, kidney, liver, lung, and uterus, were measured with a multispectral imaging system to obtain the true colors at the pixel level. The measured color truth of each pixel was converted into the standard CIELAB color space to test whether it was within the color gamut of the sRGB color space. Experiment results show that all the eight images have a portion of pixels outside the sRGB color gamut. In the worst-case scenario, the bladder sample, about 35% of the image exceeded the sRGB color gamut. The results suggest that the sRGB color space is inadequate for WSI scanners to encode H and E-stained whole-slide images, and an sRGB display may have insufficient color gamut for displaying H and E-stained histology images.
topic adobe rgb
color gamut
color management
color medical imaging
color space
digital pathology
hematoxylin and eosin stain
romm rgb
srgb
whole-slide imaging
url http://www.jpathinformatics.org/article.asp?issn=2153-3539;year=2020;volume=11;issue=1;spage=36;epage=36;aulast=Cheng
work_keys_str_mv AT weichungcheng reproduciblecolorgamutofhematoxylinandeosinstainedimagesinstandardcolorspaces
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