Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia
Recent changes in taxonomy of Rhizopus, which are now heavily relying on molecular approach, create significant problem in assigning species name to particular Rhizopus strains isolated from various sources, including tempeh. The present study aims to determine 36 strains of Rhizopus from tempeh ori...
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Bogor Agricultural University
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Online Access: | http://www.sciencedirect.com/science/article/pii/S1978301915000066 |
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doaj-9a4ee7e60db4423bac68d62b3da765042020-11-24T21:40:44ZengBogor Agricultural UniversityHayati Journal of Biosciences1978-30192015-07-0122313614210.1016/j.hjb.2015.10.004Rhizopus Species from Fresh Tempeh Collected from Several Regions in IndonesiaAnastasia Tatik Hartanti0Gayuh Rahayu1Iman Hidayat2Department of Biology, Faculty of Mathematics and Natural Sciences, Bogor Agricultural University, Darmaga Campus, Bogor 16680, IndonesiaDepartment of Biology, Faculty of Mathematics and Natural Sciences, Bogor Agricultural University, Darmaga Campus, Bogor 16680, IndonesiaResearch Center for Biology, Indonesian Institute of Sciences (LIPI), Jalan Raya JakartaeBogor km 46, Cibinong 16911, IndonesiaRecent changes in taxonomy of Rhizopus, which are now heavily relying on molecular approach, create significant problem in assigning species name to particular Rhizopus strains isolated from various sources, including tempeh. The present study aims to determine 36 strains of Rhizopus from tempeh originated from 26 locations in Indonesia, using combination of molecular phylogenetic analysis based on internal transcribed spacer ribosomal DNA sequence, physiology, and morphology to species level. The results showed that most of the strains belong to R. microsporus–complex, and only one strain belongs to R. delemar. Morphological variations within R. microsporus were observed, but under current approach they were insufficient for infraspecific delimitation. The current report is an important contribution in validating the identity of Rhizopus from fresh tempeh in Indonesia.http://www.sciencedirect.com/science/article/pii/S1978301915000066ITS rDNARhizopustaxonomytempeh |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Anastasia Tatik Hartanti Gayuh Rahayu Iman Hidayat |
spellingShingle |
Anastasia Tatik Hartanti Gayuh Rahayu Iman Hidayat Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia Hayati Journal of Biosciences ITS rDNA Rhizopus taxonomy tempeh |
author_facet |
Anastasia Tatik Hartanti Gayuh Rahayu Iman Hidayat |
author_sort |
Anastasia Tatik Hartanti |
title |
Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia |
title_short |
Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia |
title_full |
Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia |
title_fullStr |
Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia |
title_full_unstemmed |
Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia |
title_sort |
rhizopus species from fresh tempeh collected from several regions in indonesia |
publisher |
Bogor Agricultural University |
series |
Hayati Journal of Biosciences |
issn |
1978-3019 |
publishDate |
2015-07-01 |
description |
Recent changes in taxonomy of Rhizopus, which are now heavily relying on molecular approach, create significant problem in assigning species name to particular Rhizopus strains isolated from various sources, including tempeh. The present study aims to determine 36 strains of Rhizopus from tempeh originated from 26 locations in Indonesia, using combination of molecular phylogenetic analysis based on internal transcribed spacer ribosomal DNA sequence, physiology, and morphology to species level. The results showed that most of the strains belong to R. microsporus–complex, and only one strain belongs to R. delemar. Morphological variations within R. microsporus were observed, but under current approach they were insufficient for infraspecific delimitation. The current report is an important contribution in validating the identity of Rhizopus from fresh tempeh in Indonesia. |
topic |
ITS rDNA Rhizopus taxonomy tempeh |
url |
http://www.sciencedirect.com/science/article/pii/S1978301915000066 |
work_keys_str_mv |
AT anastasiatatikhartanti rhizopusspeciesfromfreshtempehcollectedfromseveralregionsinindonesia AT gayuhrahayu rhizopusspeciesfromfreshtempehcollectedfromseveralregionsinindonesia AT imanhidayat rhizopusspeciesfromfreshtempehcollectedfromseveralregionsinindonesia |
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