Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia

Recent changes in taxonomy of Rhizopus, which are now heavily relying on molecular approach, create significant problem in assigning species name to particular Rhizopus strains isolated from various sources, including tempeh. The present study aims to determine 36 strains of Rhizopus from tempeh ori...

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Main Authors: Anastasia Tatik Hartanti, Gayuh Rahayu, Iman Hidayat
Format: Article
Language:English
Published: Bogor Agricultural University 2015-07-01
Series:Hayati Journal of Biosciences
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S1978301915000066
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spelling doaj-9a4ee7e60db4423bac68d62b3da765042020-11-24T21:40:44ZengBogor Agricultural UniversityHayati Journal of Biosciences1978-30192015-07-0122313614210.1016/j.hjb.2015.10.004Rhizopus Species from Fresh Tempeh Collected from Several Regions in IndonesiaAnastasia Tatik Hartanti0Gayuh Rahayu1Iman Hidayat2Department of Biology, Faculty of Mathematics and Natural Sciences, Bogor Agricultural University, Darmaga Campus, Bogor 16680, IndonesiaDepartment of Biology, Faculty of Mathematics and Natural Sciences, Bogor Agricultural University, Darmaga Campus, Bogor 16680, IndonesiaResearch Center for Biology, Indonesian Institute of Sciences (LIPI), Jalan Raya JakartaeBogor km 46, Cibinong 16911, IndonesiaRecent changes in taxonomy of Rhizopus, which are now heavily relying on molecular approach, create significant problem in assigning species name to particular Rhizopus strains isolated from various sources, including tempeh. The present study aims to determine 36 strains of Rhizopus from tempeh originated from 26 locations in Indonesia, using combination of molecular phylogenetic analysis based on internal transcribed spacer ribosomal DNA sequence, physiology, and morphology to species level. The results showed that most of the strains belong to R. microsporus–complex, and only one strain belongs to R. delemar. Morphological variations within R. microsporus were observed, but under current approach they were insufficient for infraspecific delimitation. The current report is an important contribution in validating the identity of Rhizopus from fresh tempeh in Indonesia.http://www.sciencedirect.com/science/article/pii/S1978301915000066ITS rDNARhizopustaxonomytempeh
collection DOAJ
language English
format Article
sources DOAJ
author Anastasia Tatik Hartanti
Gayuh Rahayu
Iman Hidayat
spellingShingle Anastasia Tatik Hartanti
Gayuh Rahayu
Iman Hidayat
Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia
Hayati Journal of Biosciences
ITS rDNA
Rhizopus
taxonomy
tempeh
author_facet Anastasia Tatik Hartanti
Gayuh Rahayu
Iman Hidayat
author_sort Anastasia Tatik Hartanti
title Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia
title_short Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia
title_full Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia
title_fullStr Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia
title_full_unstemmed Rhizopus Species from Fresh Tempeh Collected from Several Regions in Indonesia
title_sort rhizopus species from fresh tempeh collected from several regions in indonesia
publisher Bogor Agricultural University
series Hayati Journal of Biosciences
issn 1978-3019
publishDate 2015-07-01
description Recent changes in taxonomy of Rhizopus, which are now heavily relying on molecular approach, create significant problem in assigning species name to particular Rhizopus strains isolated from various sources, including tempeh. The present study aims to determine 36 strains of Rhizopus from tempeh originated from 26 locations in Indonesia, using combination of molecular phylogenetic analysis based on internal transcribed spacer ribosomal DNA sequence, physiology, and morphology to species level. The results showed that most of the strains belong to R. microsporus–complex, and only one strain belongs to R. delemar. Morphological variations within R. microsporus were observed, but under current approach they were insufficient for infraspecific delimitation. The current report is an important contribution in validating the identity of Rhizopus from fresh tempeh in Indonesia.
topic ITS rDNA
Rhizopus
taxonomy
tempeh
url http://www.sciencedirect.com/science/article/pii/S1978301915000066
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AT imanhidayat rhizopusspeciesfromfreshtempehcollectedfromseveralregionsinindonesia
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