­Complete plastid genome sequences of two species of the Neotropical genus Brunellia (Brunelliaceae)

Here we present the first two complete plastid genomes for Brunelliaceae, a Neotropical family with a single genus, Brunellia. We surveyed the entire plastid genome in order to find variable cpDNA regions for further phylogenetic analyses across the family. We sampled morphologically different speci...

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Main Authors: Janice Valencia-D, José Murillo-A, Clara Inés Orozco, Carlos Parra-O, Kurt M. Neubig
Format: Article
Language:English
Published: PeerJ Inc. 2020-01-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/8392.pdf
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spelling doaj-9ac3d984274a4fdd98be2d9d6ce511842020-11-25T01:57:45ZengPeerJ Inc.PeerJ2167-83592020-01-018e839210.7717/peerj.8392­Complete plastid genome sequences of two species of the Neotropical genus Brunellia (Brunelliaceae)Janice Valencia-D0José Murillo-A1Clara Inés Orozco2Carlos Parra-O3Kurt M. Neubig4School of Biological Sciences, Southern Illinois University at Carbondale, Carbondale, IL, United States of AmericaInstituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogotá D.C., ColombiaInstituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogotá D.C., ColombiaInstituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogotá D.C., ColombiaSchool of Biological Sciences, Southern Illinois University at Carbondale, Carbondale, IL, United States of AmericaHere we present the first two complete plastid genomes for Brunelliaceae, a Neotropical family with a single genus, Brunellia. We surveyed the entire plastid genome in order to find variable cpDNA regions for further phylogenetic analyses across the family. We sampled morphologically different species, B. antioquensis and B. trianae, and found that the plastid genomes are 157,685 and 157,775 bp in length and display the typical quadripartite structure found in angiosperms. Despite the clear morphological distinction between both species, the molecular data show a very low level of divergence. The amount of nucleotide substitutions per site is one of the lowest reported to date among published congeneric studies (π = 0.00025). The plastid genomes have gene order and content coincident with other COM (Celastrales, Oxalidales, Malpighiales) relatives. Phylogenetic analyses of selected superrosid representatives show high bootstrap support for the ((C,M)O) topology. The N-fixing clade appears as the sister group of the COM clade and Zygophyllales as the sister to the rest of the fabids group.https://peerj.com/articles/8392.pdfBrunelliaBrunelliaceaeCOM groupFabidsOxalidalesPlastid genome
collection DOAJ
language English
format Article
sources DOAJ
author Janice Valencia-D
José Murillo-A
Clara Inés Orozco
Carlos Parra-O
Kurt M. Neubig
spellingShingle Janice Valencia-D
José Murillo-A
Clara Inés Orozco
Carlos Parra-O
Kurt M. Neubig
­Complete plastid genome sequences of two species of the Neotropical genus Brunellia (Brunelliaceae)
PeerJ
Brunellia
Brunelliaceae
COM group
Fabids
Oxalidales
Plastid genome
author_facet Janice Valencia-D
José Murillo-A
Clara Inés Orozco
Carlos Parra-O
Kurt M. Neubig
author_sort Janice Valencia-D
title ­Complete plastid genome sequences of two species of the Neotropical genus Brunellia (Brunelliaceae)
title_short ­Complete plastid genome sequences of two species of the Neotropical genus Brunellia (Brunelliaceae)
title_full ­Complete plastid genome sequences of two species of the Neotropical genus Brunellia (Brunelliaceae)
title_fullStr ­Complete plastid genome sequences of two species of the Neotropical genus Brunellia (Brunelliaceae)
title_full_unstemmed ­Complete plastid genome sequences of two species of the Neotropical genus Brunellia (Brunelliaceae)
title_sort ­complete plastid genome sequences of two species of the neotropical genus brunellia (brunelliaceae)
publisher PeerJ Inc.
series PeerJ
issn 2167-8359
publishDate 2020-01-01
description Here we present the first two complete plastid genomes for Brunelliaceae, a Neotropical family with a single genus, Brunellia. We surveyed the entire plastid genome in order to find variable cpDNA regions for further phylogenetic analyses across the family. We sampled morphologically different species, B. antioquensis and B. trianae, and found that the plastid genomes are 157,685 and 157,775 bp in length and display the typical quadripartite structure found in angiosperms. Despite the clear morphological distinction between both species, the molecular data show a very low level of divergence. The amount of nucleotide substitutions per site is one of the lowest reported to date among published congeneric studies (π = 0.00025). The plastid genomes have gene order and content coincident with other COM (Celastrales, Oxalidales, Malpighiales) relatives. Phylogenetic analyses of selected superrosid representatives show high bootstrap support for the ((C,M)O) topology. The N-fixing clade appears as the sister group of the COM clade and Zygophyllales as the sister to the rest of the fabids group.
topic Brunellia
Brunelliaceae
COM group
Fabids
Oxalidales
Plastid genome
url https://peerj.com/articles/8392.pdf
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