Heterologous xylose isomerase pathway and evolutionary engineering improve xylose utilization in Saccharomyces cerevisiae

Xylose utilization is one key issue for the bioconversion of lignocelluloses. It is promising approach to engineer heterologous pathway for xylose utilization in Saccharomyces cerevisiae. Here, we constructed xylose-fermenting yeast SyBE001 by combinatorial fine-tuning the expression of XylA and en...

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Main Authors: Xin eQi, Jian eZha, Gao-Gang eLiu, Weiwen eZhang, Bing-Zhi eLi, Yingjin eYuan
Format: Article
Language:English
Published: Frontiers Media S.A. 2015-10-01
Series:Frontiers in Microbiology
Subjects:
Online Access:http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.01165/full
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spelling doaj-9b82b0a6380c499bbf3d754ed3ccc9ed2020-11-24T22:28:20ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2015-10-01610.3389/fmicb.2015.01165149358Heterologous xylose isomerase pathway and evolutionary engineering improve xylose utilization in Saccharomyces cerevisiaeXin eQi0Jian eZha1Gao-Gang eLiu2Weiwen eZhang3Bing-Zhi eLi4Yingjin eYuan5Tianjin UniversityTianjin UniversityTianjin UniversityTianjin UniversityTianjin UniversityTianjin UniversityXylose utilization is one key issue for the bioconversion of lignocelluloses. It is promising approach to engineer heterologous pathway for xylose utilization in Saccharomyces cerevisiae. Here, we constructed xylose-fermenting yeast SyBE001 by combinatorial fine-tuning the expression of XylA and endogenous XKS1. Overexpression of genes RKI1, RPE1, TKL1 and TAL1 in the non-oxidative pentose phosphate pathway in SyBE002 accelerated xylose utilization by 19%. By repetitive adaptation, the xylose utilization rate increased to about 10 folds in strain SyBE003 evolved from SyBE002. Gene expression analysis identified variety of genes with significantly different expressions in pentose phosphate pathway, glycolysis and tricarboxylic acid cycle in SyBE003.http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.01165/fullSynthetic Biologyyeastevolutionary engineeringXylose isomeraseXylose utilizationXylA
collection DOAJ
language English
format Article
sources DOAJ
author Xin eQi
Jian eZha
Gao-Gang eLiu
Weiwen eZhang
Bing-Zhi eLi
Yingjin eYuan
spellingShingle Xin eQi
Jian eZha
Gao-Gang eLiu
Weiwen eZhang
Bing-Zhi eLi
Yingjin eYuan
Heterologous xylose isomerase pathway and evolutionary engineering improve xylose utilization in Saccharomyces cerevisiae
Frontiers in Microbiology
Synthetic Biology
yeast
evolutionary engineering
Xylose isomerase
Xylose utilization
XylA
author_facet Xin eQi
Jian eZha
Gao-Gang eLiu
Weiwen eZhang
Bing-Zhi eLi
Yingjin eYuan
author_sort Xin eQi
title Heterologous xylose isomerase pathway and evolutionary engineering improve xylose utilization in Saccharomyces cerevisiae
title_short Heterologous xylose isomerase pathway and evolutionary engineering improve xylose utilization in Saccharomyces cerevisiae
title_full Heterologous xylose isomerase pathway and evolutionary engineering improve xylose utilization in Saccharomyces cerevisiae
title_fullStr Heterologous xylose isomerase pathway and evolutionary engineering improve xylose utilization in Saccharomyces cerevisiae
title_full_unstemmed Heterologous xylose isomerase pathway and evolutionary engineering improve xylose utilization in Saccharomyces cerevisiae
title_sort heterologous xylose isomerase pathway and evolutionary engineering improve xylose utilization in saccharomyces cerevisiae
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2015-10-01
description Xylose utilization is one key issue for the bioconversion of lignocelluloses. It is promising approach to engineer heterologous pathway for xylose utilization in Saccharomyces cerevisiae. Here, we constructed xylose-fermenting yeast SyBE001 by combinatorial fine-tuning the expression of XylA and endogenous XKS1. Overexpression of genes RKI1, RPE1, TKL1 and TAL1 in the non-oxidative pentose phosphate pathway in SyBE002 accelerated xylose utilization by 19%. By repetitive adaptation, the xylose utilization rate increased to about 10 folds in strain SyBE003 evolved from SyBE002. Gene expression analysis identified variety of genes with significantly different expressions in pentose phosphate pathway, glycolysis and tricarboxylic acid cycle in SyBE003.
topic Synthetic Biology
yeast
evolutionary engineering
Xylose isomerase
Xylose utilization
XylA
url http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.01165/full
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