Statistics of correlated percolation in a bacterial community.

Signal propagation over long distances is a ubiquitous feature of multicellular communities, but cell-to-cell variability can cause propagation to be highly heterogeneous. Simple models of signal propagation in heterogenous media, such as percolation theory, can potentially provide a quantitative un...

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Main Authors: Xiaoling Zhai, Joseph W Larkin, Kaito Kikuchi, Samuel E Redford, Ushasi Roy, Gürol M Süel, Andrew Mugler
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-12-01
Series:PLoS Computational Biology
Online Access:https://doi.org/10.1371/journal.pcbi.1007508
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spelling doaj-9cf19658a31346ce89934300a71ebfc82021-04-21T15:38:08ZengPublic Library of Science (PLoS)PLoS Computational Biology1553-734X1553-73582019-12-011512e100750810.1371/journal.pcbi.1007508Statistics of correlated percolation in a bacterial community.Xiaoling ZhaiJoseph W LarkinKaito KikuchiSamuel E RedfordUshasi RoyGürol M SüelAndrew MuglerSignal propagation over long distances is a ubiquitous feature of multicellular communities, but cell-to-cell variability can cause propagation to be highly heterogeneous. Simple models of signal propagation in heterogenous media, such as percolation theory, can potentially provide a quantitative understanding of these processes, but it is unclear whether these simple models properly capture the complexities of multicellular systems. We recently discovered that in biofilms of the bacterium Bacillus subtilis, the propagation of an electrical signal is statistically consistent with percolation theory, and yet it is reasonable to suspect that key features of this system go beyond the simple assumptions of basic percolation theory. Indeed, we find here that the probability for a cell to signal is not independent from other cells as assumed in percolation theory, but instead is correlated with its nearby neighbors. We develop a mechanistic model, in which correlated signaling emerges from cell division, phenotypic inheritance, and cell displacement, that reproduces the experimentally observed correlations. We find that the correlations do not significantly affect the spatial statistics, which we rationalize using a renormalization argument. Moreover, the fraction of signaling cells is not constant in space, as assumed in percolation theory, but instead varies within and across biofilms. We find that this feature lowers the fraction of signaling cells at which one observes the characteristic power-law statistics of cluster sizes, consistent with our experimental results. We validate the model using a mutant biofilm whose signaling probability decays along the propagation direction. Our results reveal key statistical features of a correlated signaling process in a multicellular community. More broadly, our results identify extensions to percolation theory that do or do not alter its predictions and may be more appropriate for biological systems.https://doi.org/10.1371/journal.pcbi.1007508
collection DOAJ
language English
format Article
sources DOAJ
author Xiaoling Zhai
Joseph W Larkin
Kaito Kikuchi
Samuel E Redford
Ushasi Roy
Gürol M Süel
Andrew Mugler
spellingShingle Xiaoling Zhai
Joseph W Larkin
Kaito Kikuchi
Samuel E Redford
Ushasi Roy
Gürol M Süel
Andrew Mugler
Statistics of correlated percolation in a bacterial community.
PLoS Computational Biology
author_facet Xiaoling Zhai
Joseph W Larkin
Kaito Kikuchi
Samuel E Redford
Ushasi Roy
Gürol M Süel
Andrew Mugler
author_sort Xiaoling Zhai
title Statistics of correlated percolation in a bacterial community.
title_short Statistics of correlated percolation in a bacterial community.
title_full Statistics of correlated percolation in a bacterial community.
title_fullStr Statistics of correlated percolation in a bacterial community.
title_full_unstemmed Statistics of correlated percolation in a bacterial community.
title_sort statistics of correlated percolation in a bacterial community.
publisher Public Library of Science (PLoS)
series PLoS Computational Biology
issn 1553-734X
1553-7358
publishDate 2019-12-01
description Signal propagation over long distances is a ubiquitous feature of multicellular communities, but cell-to-cell variability can cause propagation to be highly heterogeneous. Simple models of signal propagation in heterogenous media, such as percolation theory, can potentially provide a quantitative understanding of these processes, but it is unclear whether these simple models properly capture the complexities of multicellular systems. We recently discovered that in biofilms of the bacterium Bacillus subtilis, the propagation of an electrical signal is statistically consistent with percolation theory, and yet it is reasonable to suspect that key features of this system go beyond the simple assumptions of basic percolation theory. Indeed, we find here that the probability for a cell to signal is not independent from other cells as assumed in percolation theory, but instead is correlated with its nearby neighbors. We develop a mechanistic model, in which correlated signaling emerges from cell division, phenotypic inheritance, and cell displacement, that reproduces the experimentally observed correlations. We find that the correlations do not significantly affect the spatial statistics, which we rationalize using a renormalization argument. Moreover, the fraction of signaling cells is not constant in space, as assumed in percolation theory, but instead varies within and across biofilms. We find that this feature lowers the fraction of signaling cells at which one observes the characteristic power-law statistics of cluster sizes, consistent with our experimental results. We validate the model using a mutant biofilm whose signaling probability decays along the propagation direction. Our results reveal key statistical features of a correlated signaling process in a multicellular community. More broadly, our results identify extensions to percolation theory that do or do not alter its predictions and may be more appropriate for biological systems.
url https://doi.org/10.1371/journal.pcbi.1007508
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