Surface plasmon resonance analysis for detecting non-structural protein 1 of dengue virus in Indonesia

Dengue is an acute febrile disease caused by dengue virus (DENV) that is transmitted by Aedes sp., which causes serious health conditions in many countries. Non-structural protein 1 (NS1) is a co-factor for the RNA replication of this virus, which represents a new strategy for the identification of...

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Main Authors: Widoretno, Agus Sjahrurachman, Beti Ernawati Dewi, Kenny Lischer, Diah Kartika Pratami, Darin Flamandita, Muhamad Sahlan
Format: Article
Language:English
Published: Elsevier 2020-08-01
Series:Saudi Journal of Biological Sciences
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S1319562X20302576
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spelling doaj-9d967f6986c344528e5d89e9bae74fc52020-11-25T03:11:57ZengElsevierSaudi Journal of Biological Sciences1319-562X2020-08-0127819311937Surface plasmon resonance analysis for detecting non-structural protein 1 of dengue virus in Indonesia Widoretno0Agus Sjahrurachman1Beti Ernawati Dewi2Kenny Lischer3Diah Kartika Pratami4Darin Flamandita5Muhamad Sahlan6Doctoral Program in Biomedical Science, Faculty of Medicine, Universitas Indonesia, Salemba, Jakarta 10430, Indonesia; The National Institute of Health Research Development, The Ministry of Health of the Republic of Indonesia, Central Jakarta, Jakarta Capital Special Region 10560, IndonesiaDepartment of Microbiology, Faculty of Medicine, Universitas Indonesia, DKI Jakarta 10430, IndonesiaDepartment of Pharmacology and Therapeutics, Faculty of Medicine, Universitas Indonesia, DKI Jakarta 10430, IndonesiaBioprocess Technology, Department of Chemical Engineering, Faculty of Engineering, Universitas Indonesia, Depok, West Java 16424, Indonesia; Research Center for Biomedical Engineering, Universitas Indonesia, Depok, West Java 16424, IndonesiaLab of Pharmacognosy and Phytochemistry, Faculty of Pharmacy, Pancasila University, Jakarta 12640, IndonesiaBioprocess Technology, Department of Chemical Engineering, Faculty of Engineering, Universitas Indonesia, Depok, West Java 16424, IndonesiaBioprocess Technology, Department of Chemical Engineering, Faculty of Engineering, Universitas Indonesia, Depok, West Java 16424, Indonesia; Research Center for Biomedical Engineering, Universitas Indonesia, Depok, West Java 16424, Indonesia; Corresponding author at: Bioprocess Technology, Department of Chemical Engineering, Faculty of Engineering, Universitas Indonesia, Depok, West Java 16424, Indonesia.Dengue is an acute febrile disease caused by dengue virus (DENV) that is transmitted by Aedes sp., which causes serious health conditions in many countries. Non-structural protein 1 (NS1) is a co-factor for the RNA replication of this virus, which represents a new strategy for the identification of dengue. Prompt and accurate laboratory diagnosis of this infection is required to assist in patient triage and management, as well as prevent the spread of this infection. In the present study, we tested the potential of surface plasmon resonance (SPR) as a diagnostic tool for dengue infections. NS1 antigen protein was used as an analyte that targets anti-NS1 antibodies, with their interaction resulting in a change in the refractive index. In comparison to currently available gold-standard detection methods [enzyme-linked immunosorbent assay (ELISA) and reverse transcription polymerase chain reaction (RT-PCR)], SPR showed a similar sensitivity but greater efficiency and simplicity in terms of infection detection. Out of 26 samples collected from patients with dengue in Indonesia, SPR was able to correctly identify all 16 positively infected individuals at a lower concentration and a shorter period of time compared to ELISA and RT-PCR. This study revealed that SPR is a promising tool for DENV detection and potentially other diseases as well.http://www.sciencedirect.com/science/article/pii/S1319562X20302576Dengue detectionNon-structural protein 1Anti-non-structural protein 1Surface plasmon resonanceAlternative method
collection DOAJ
language English
format Article
sources DOAJ
author Widoretno
Agus Sjahrurachman
Beti Ernawati Dewi
Kenny Lischer
Diah Kartika Pratami
Darin Flamandita
Muhamad Sahlan
spellingShingle Widoretno
Agus Sjahrurachman
Beti Ernawati Dewi
Kenny Lischer
Diah Kartika Pratami
Darin Flamandita
Muhamad Sahlan
Surface plasmon resonance analysis for detecting non-structural protein 1 of dengue virus in Indonesia
Saudi Journal of Biological Sciences
Dengue detection
Non-structural protein 1
Anti-non-structural protein 1
Surface plasmon resonance
Alternative method
author_facet Widoretno
Agus Sjahrurachman
Beti Ernawati Dewi
Kenny Lischer
Diah Kartika Pratami
Darin Flamandita
Muhamad Sahlan
author_sort Widoretno
title Surface plasmon resonance analysis for detecting non-structural protein 1 of dengue virus in Indonesia
title_short Surface plasmon resonance analysis for detecting non-structural protein 1 of dengue virus in Indonesia
title_full Surface plasmon resonance analysis for detecting non-structural protein 1 of dengue virus in Indonesia
title_fullStr Surface plasmon resonance analysis for detecting non-structural protein 1 of dengue virus in Indonesia
title_full_unstemmed Surface plasmon resonance analysis for detecting non-structural protein 1 of dengue virus in Indonesia
title_sort surface plasmon resonance analysis for detecting non-structural protein 1 of dengue virus in indonesia
publisher Elsevier
series Saudi Journal of Biological Sciences
issn 1319-562X
publishDate 2020-08-01
description Dengue is an acute febrile disease caused by dengue virus (DENV) that is transmitted by Aedes sp., which causes serious health conditions in many countries. Non-structural protein 1 (NS1) is a co-factor for the RNA replication of this virus, which represents a new strategy for the identification of dengue. Prompt and accurate laboratory diagnosis of this infection is required to assist in patient triage and management, as well as prevent the spread of this infection. In the present study, we tested the potential of surface plasmon resonance (SPR) as a diagnostic tool for dengue infections. NS1 antigen protein was used as an analyte that targets anti-NS1 antibodies, with their interaction resulting in a change in the refractive index. In comparison to currently available gold-standard detection methods [enzyme-linked immunosorbent assay (ELISA) and reverse transcription polymerase chain reaction (RT-PCR)], SPR showed a similar sensitivity but greater efficiency and simplicity in terms of infection detection. Out of 26 samples collected from patients with dengue in Indonesia, SPR was able to correctly identify all 16 positively infected individuals at a lower concentration and a shorter period of time compared to ELISA and RT-PCR. This study revealed that SPR is a promising tool for DENV detection and potentially other diseases as well.
topic Dengue detection
Non-structural protein 1
Anti-non-structural protein 1
Surface plasmon resonance
Alternative method
url http://www.sciencedirect.com/science/article/pii/S1319562X20302576
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