Molecular characterization of apricot (Prunus armeniaca L.) cultivars using cross species SSR amplification with peach primers

Apricot takes an important place in Hungarian fruit production. Considering morphological characteristics of apricots it was concluded that the genetics background of European cultivars is very limited. Molecular markers and their use for genotyping have revolutionized the identification of cultiva...

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Main Authors: Sz. Ruthner, A. Pedryc, B. Kriska, C. Romero, M. L. Badenes M.
Format: Article
Language:English
Published: University of Debrecen 2006-06-01
Series:International Journal of Horticultural Science
Subjects:
Online Access:https://ojs.lib.unideb.hu/IJHS/article/view/659
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spelling doaj-9f849338202c46d2b160fd0a578784862020-11-25T03:03:52ZengUniversity of DebrecenInternational Journal of Horticultural Science1585-04042676-931X2006-06-0112310.31421/IJHS/12/3/659Molecular characterization of apricot (Prunus armeniaca L.) cultivars using cross species SSR amplification with peach primersSz. Ruthner0A. Pedryc1B. Kriska2C. Romero3M. L. Badenes M.4Department of Genetics and Horticultural Plant Breeding Faculty of Horticultural Sciences Corvinus University of Budapest H-1118 Budapest, Villányi út 29-43Department of Genetics and Horticultural Plant Breeding Faculty of Horticultural Sciences Corvinus University of Budapest H-1118 Budapest, Villányi út 29-43Mendel University of Agriculture and Forestry, Brno/Lednice, Czech Republiclnstituto Valenciano de Investigaciones Agrarias IVIA 46113 Moncada Valencia, Spainlnstituto Valenciano de Investigaciones Agrarias IVIA 46113 Moncada Valencia, Spain Apricot takes an important place in Hungarian fruit production. Considering morphological characteristics of apricots it was concluded that the genetics background of European cultivars is very limited. Molecular markers and their use for genotyping have revolutionized the identification of cultivars. In a classic apricot breeding program, it is important to be able to establish unique DNA profiles of selections to identify them unambiguously and to determine their genetic relationship. Presently SSR is far the most frequently performed technique for genetic diversity studies. In this study there were used peach and apricot primer pairs from four different sources in order to examine microsatellite polymorphism among cultivars and investigate relationships among them. The possibility of cross species amplification among different Prunus species using SSR primers allowed us to use primers developed in peach to study genetic diversity in apricot. In this work, 90% of the primers used were able to amplify SSRs in apricot and more than half of them were polymorphic. With the 10 primer pairs utilized were proven to be sufficient to set unique fingerprint for several cultivars studied. The obtained dendrogram classified of the 45 cultivars included in this study into two major groups and several subgroups. https://ojs.lib.unideb.hu/IJHS/article/view/659Prunus armeniaca L.apricot cultivarSSR markerUPGMA
collection DOAJ
language English
format Article
sources DOAJ
author Sz. Ruthner
A. Pedryc
B. Kriska
C. Romero
M. L. Badenes M.
spellingShingle Sz. Ruthner
A. Pedryc
B. Kriska
C. Romero
M. L. Badenes M.
Molecular characterization of apricot (Prunus armeniaca L.) cultivars using cross species SSR amplification with peach primers
International Journal of Horticultural Science
Prunus armeniaca L.
apricot cultivar
SSR marker
UPGMA
author_facet Sz. Ruthner
A. Pedryc
B. Kriska
C. Romero
M. L. Badenes M.
author_sort Sz. Ruthner
title Molecular characterization of apricot (Prunus armeniaca L.) cultivars using cross species SSR amplification with peach primers
title_short Molecular characterization of apricot (Prunus armeniaca L.) cultivars using cross species SSR amplification with peach primers
title_full Molecular characterization of apricot (Prunus armeniaca L.) cultivars using cross species SSR amplification with peach primers
title_fullStr Molecular characterization of apricot (Prunus armeniaca L.) cultivars using cross species SSR amplification with peach primers
title_full_unstemmed Molecular characterization of apricot (Prunus armeniaca L.) cultivars using cross species SSR amplification with peach primers
title_sort molecular characterization of apricot (prunus armeniaca l.) cultivars using cross species ssr amplification with peach primers
publisher University of Debrecen
series International Journal of Horticultural Science
issn 1585-0404
2676-931X
publishDate 2006-06-01
description Apricot takes an important place in Hungarian fruit production. Considering morphological characteristics of apricots it was concluded that the genetics background of European cultivars is very limited. Molecular markers and their use for genotyping have revolutionized the identification of cultivars. In a classic apricot breeding program, it is important to be able to establish unique DNA profiles of selections to identify them unambiguously and to determine their genetic relationship. Presently SSR is far the most frequently performed technique for genetic diversity studies. In this study there were used peach and apricot primer pairs from four different sources in order to examine microsatellite polymorphism among cultivars and investigate relationships among them. The possibility of cross species amplification among different Prunus species using SSR primers allowed us to use primers developed in peach to study genetic diversity in apricot. In this work, 90% of the primers used were able to amplify SSRs in apricot and more than half of them were polymorphic. With the 10 primer pairs utilized were proven to be sufficient to set unique fingerprint for several cultivars studied. The obtained dendrogram classified of the 45 cultivars included in this study into two major groups and several subgroups.
topic Prunus armeniaca L.
apricot cultivar
SSR marker
UPGMA
url https://ojs.lib.unideb.hu/IJHS/article/view/659
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