Intron and gene size expansion during nervous system evolution

Abstract Background The evolutionary radiation of animals was accompanied by extensive expansion of gene and genome sizes, increased isoform diversity, and complexity of regulation. Results Here we show that the longest genes are enriched for expression in neuronal tissues of diverse vertebrates and...

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Main Authors: Matthew J. McCoy, Andrew Z. Fire
Format: Article
Language:English
Published: BMC 2020-05-01
Series:BMC Genomics
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12864-020-6760-4
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spelling doaj-9fd395cf08cb47b7a4e7348625828a642020-11-25T03:49:28ZengBMCBMC Genomics1471-21642020-05-012111910.1186/s12864-020-6760-4Intron and gene size expansion during nervous system evolutionMatthew J. McCoy0Andrew Z. Fire1Grass Fellowship Program, Marine Biological LaboratoryDepartments of Pathology and Genetics, Stanford University School of MedicineAbstract Background The evolutionary radiation of animals was accompanied by extensive expansion of gene and genome sizes, increased isoform diversity, and complexity of regulation. Results Here we show that the longest genes are enriched for expression in neuronal tissues of diverse vertebrates and of invertebrates. Additionally, we show that neuronal gene size expansion occurred predominantly through net gains in intron size, with a positional bias toward the 5′ end of each gene. Conclusions We find that intron and gene size expansion is a feature of many genes whose expression is enriched in nervous systems. We speculate that unique attributes of neurons may subject neuronal genes to evolutionary forces favoring net size expansion. This process could be associated with tissue-specific constraints on gene function and/or the evolution of increasingly complex gene regulation in nervous systems.http://link.springer.com/article/10.1186/s12864-020-6760-4Genome evolutionGene sizeIntron sizeNervous system evolutionLong genesLong introns
collection DOAJ
language English
format Article
sources DOAJ
author Matthew J. McCoy
Andrew Z. Fire
spellingShingle Matthew J. McCoy
Andrew Z. Fire
Intron and gene size expansion during nervous system evolution
BMC Genomics
Genome evolution
Gene size
Intron size
Nervous system evolution
Long genes
Long introns
author_facet Matthew J. McCoy
Andrew Z. Fire
author_sort Matthew J. McCoy
title Intron and gene size expansion during nervous system evolution
title_short Intron and gene size expansion during nervous system evolution
title_full Intron and gene size expansion during nervous system evolution
title_fullStr Intron and gene size expansion during nervous system evolution
title_full_unstemmed Intron and gene size expansion during nervous system evolution
title_sort intron and gene size expansion during nervous system evolution
publisher BMC
series BMC Genomics
issn 1471-2164
publishDate 2020-05-01
description Abstract Background The evolutionary radiation of animals was accompanied by extensive expansion of gene and genome sizes, increased isoform diversity, and complexity of regulation. Results Here we show that the longest genes are enriched for expression in neuronal tissues of diverse vertebrates and of invertebrates. Additionally, we show that neuronal gene size expansion occurred predominantly through net gains in intron size, with a positional bias toward the 5′ end of each gene. Conclusions We find that intron and gene size expansion is a feature of many genes whose expression is enriched in nervous systems. We speculate that unique attributes of neurons may subject neuronal genes to evolutionary forces favoring net size expansion. This process could be associated with tissue-specific constraints on gene function and/or the evolution of increasingly complex gene regulation in nervous systems.
topic Genome evolution
Gene size
Intron size
Nervous system evolution
Long genes
Long introns
url http://link.springer.com/article/10.1186/s12864-020-6760-4
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