Discovery of N-glycan Biomarkers for the Canine Osteoarthritis

Protein glycosylation is a post-translational modification that impacts on protein activity, stability, and interactions. It was sensitively altered by the cellular state and, therefore, is now used for a diagnostic or prognostic indicator of various human diseases such as cancer. To evaluate the cl...

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Main Authors: Hyunjun Lee, Ahyun Lee, Nari Seo, Jiwon Oh, Oh-Kyeong Kweon, Hyun Joo An, Jaehan Kim
Format: Article
Language:English
Published: MDPI AG 2020-09-01
Series:Life
Subjects:
Online Access:https://www.mdpi.com/2075-1729/10/9/199
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spelling doaj-a0209659d47b45d6b3028f0a4e7e1d2e2020-11-25T03:07:15ZengMDPI AGLife2075-17292020-09-011019919910.3390/life10090199Discovery of N-glycan Biomarkers for the Canine OsteoarthritisHyunjun Lee0Ahyun Lee1Nari Seo2Jiwon Oh3Oh-Kyeong Kweon4Hyun Joo An5Jaehan Kim6Department of Food and Nutrition, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, KoreaDepartment of Food and Nutrition, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, KoreaGraduate School of Analytical Science and Technology, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, KoreaDepartment of Veterinary Surgery, College of Veterinary Medicine, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, KoreaDepartment of Veterinary Surgery, College of Veterinary Medicine, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, KoreaGraduate School of Analytical Science and Technology, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, KoreaDepartment of Food and Nutrition, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, KoreaProtein glycosylation is a post-translational modification that impacts on protein activity, stability, and interactions. It was sensitively altered by the cellular state and, therefore, is now used for a diagnostic or prognostic indicator of various human diseases such as cancer. To evaluate the clinical feasibility in the veterinary area, the N-glycan biomarkers were discovered from canine serum for the diagnosis of osteoarthritis (OA), which is one of the most common diseases of dogs. N-glycome was obtained from 20 μL of canine serum by the enzymatic cleavage followed by the purification and enrichment using solid-phase extraction. Independent compositions of 163 and 463 N-glycans were found from healthy control (n = 41) and osteoarthritis patients (n = 92), respectively. Initially, 31 of the potential biomarkers were screened by the <i>p</i>-values below 1.0 × 10<sup>−10</sup> from ANOVA. Then, the area under the curve (AUC) and the intensity ratio between OA patient and healthy control (P/C ratio) were calculated. Considering the diagnostic efficacy, the AUC bigger than 0.9 and the P/C ratio larger than 3.0 were used to discover 16 N-glycans as diagnostic biomarkers. Particularly, five of the diagnostic biomarkers were AUC above 0.99 and three of N-glycans had AUC 1.0. The results suggest a clear possibility for N-glycan biomarkers to be used as a clinical tool in the veterinary medical area enabling to provide objective and non-invasive diagnostic information.https://www.mdpi.com/2075-1729/10/9/199N-glycanserumcanineosteoarthritismass spectrometrybiomarker
collection DOAJ
language English
format Article
sources DOAJ
author Hyunjun Lee
Ahyun Lee
Nari Seo
Jiwon Oh
Oh-Kyeong Kweon
Hyun Joo An
Jaehan Kim
spellingShingle Hyunjun Lee
Ahyun Lee
Nari Seo
Jiwon Oh
Oh-Kyeong Kweon
Hyun Joo An
Jaehan Kim
Discovery of N-glycan Biomarkers for the Canine Osteoarthritis
Life
N-glycan
serum
canine
osteoarthritis
mass spectrometry
biomarker
author_facet Hyunjun Lee
Ahyun Lee
Nari Seo
Jiwon Oh
Oh-Kyeong Kweon
Hyun Joo An
Jaehan Kim
author_sort Hyunjun Lee
title Discovery of N-glycan Biomarkers for the Canine Osteoarthritis
title_short Discovery of N-glycan Biomarkers for the Canine Osteoarthritis
title_full Discovery of N-glycan Biomarkers for the Canine Osteoarthritis
title_fullStr Discovery of N-glycan Biomarkers for the Canine Osteoarthritis
title_full_unstemmed Discovery of N-glycan Biomarkers for the Canine Osteoarthritis
title_sort discovery of n-glycan biomarkers for the canine osteoarthritis
publisher MDPI AG
series Life
issn 2075-1729
publishDate 2020-09-01
description Protein glycosylation is a post-translational modification that impacts on protein activity, stability, and interactions. It was sensitively altered by the cellular state and, therefore, is now used for a diagnostic or prognostic indicator of various human diseases such as cancer. To evaluate the clinical feasibility in the veterinary area, the N-glycan biomarkers were discovered from canine serum for the diagnosis of osteoarthritis (OA), which is one of the most common diseases of dogs. N-glycome was obtained from 20 μL of canine serum by the enzymatic cleavage followed by the purification and enrichment using solid-phase extraction. Independent compositions of 163 and 463 N-glycans were found from healthy control (n = 41) and osteoarthritis patients (n = 92), respectively. Initially, 31 of the potential biomarkers were screened by the <i>p</i>-values below 1.0 × 10<sup>−10</sup> from ANOVA. Then, the area under the curve (AUC) and the intensity ratio between OA patient and healthy control (P/C ratio) were calculated. Considering the diagnostic efficacy, the AUC bigger than 0.9 and the P/C ratio larger than 3.0 were used to discover 16 N-glycans as diagnostic biomarkers. Particularly, five of the diagnostic biomarkers were AUC above 0.99 and three of N-glycans had AUC 1.0. The results suggest a clear possibility for N-glycan biomarkers to be used as a clinical tool in the veterinary medical area enabling to provide objective and non-invasive diagnostic information.
topic N-glycan
serum
canine
osteoarthritis
mass spectrometry
biomarker
url https://www.mdpi.com/2075-1729/10/9/199
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