Discovery of N-glycan Biomarkers for the Canine Osteoarthritis
Protein glycosylation is a post-translational modification that impacts on protein activity, stability, and interactions. It was sensitively altered by the cellular state and, therefore, is now used for a diagnostic or prognostic indicator of various human diseases such as cancer. To evaluate the cl...
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doaj-a0209659d47b45d6b3028f0a4e7e1d2e2020-11-25T03:07:15ZengMDPI AGLife2075-17292020-09-011019919910.3390/life10090199Discovery of N-glycan Biomarkers for the Canine OsteoarthritisHyunjun Lee0Ahyun Lee1Nari Seo2Jiwon Oh3Oh-Kyeong Kweon4Hyun Joo An5Jaehan Kim6Department of Food and Nutrition, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, KoreaDepartment of Food and Nutrition, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, KoreaGraduate School of Analytical Science and Technology, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, KoreaDepartment of Veterinary Surgery, College of Veterinary Medicine, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, KoreaDepartment of Veterinary Surgery, College of Veterinary Medicine, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, KoreaGraduate School of Analytical Science and Technology, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, KoreaDepartment of Food and Nutrition, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, KoreaProtein glycosylation is a post-translational modification that impacts on protein activity, stability, and interactions. It was sensitively altered by the cellular state and, therefore, is now used for a diagnostic or prognostic indicator of various human diseases such as cancer. To evaluate the clinical feasibility in the veterinary area, the N-glycan biomarkers were discovered from canine serum for the diagnosis of osteoarthritis (OA), which is one of the most common diseases of dogs. N-glycome was obtained from 20 μL of canine serum by the enzymatic cleavage followed by the purification and enrichment using solid-phase extraction. Independent compositions of 163 and 463 N-glycans were found from healthy control (n = 41) and osteoarthritis patients (n = 92), respectively. Initially, 31 of the potential biomarkers were screened by the <i>p</i>-values below 1.0 × 10<sup>−10</sup> from ANOVA. Then, the area under the curve (AUC) and the intensity ratio between OA patient and healthy control (P/C ratio) were calculated. Considering the diagnostic efficacy, the AUC bigger than 0.9 and the P/C ratio larger than 3.0 were used to discover 16 N-glycans as diagnostic biomarkers. Particularly, five of the diagnostic biomarkers were AUC above 0.99 and three of N-glycans had AUC 1.0. The results suggest a clear possibility for N-glycan biomarkers to be used as a clinical tool in the veterinary medical area enabling to provide objective and non-invasive diagnostic information.https://www.mdpi.com/2075-1729/10/9/199N-glycanserumcanineosteoarthritismass spectrometrybiomarker |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Hyunjun Lee Ahyun Lee Nari Seo Jiwon Oh Oh-Kyeong Kweon Hyun Joo An Jaehan Kim |
spellingShingle |
Hyunjun Lee Ahyun Lee Nari Seo Jiwon Oh Oh-Kyeong Kweon Hyun Joo An Jaehan Kim Discovery of N-glycan Biomarkers for the Canine Osteoarthritis Life N-glycan serum canine osteoarthritis mass spectrometry biomarker |
author_facet |
Hyunjun Lee Ahyun Lee Nari Seo Jiwon Oh Oh-Kyeong Kweon Hyun Joo An Jaehan Kim |
author_sort |
Hyunjun Lee |
title |
Discovery of N-glycan Biomarkers for the Canine Osteoarthritis |
title_short |
Discovery of N-glycan Biomarkers for the Canine Osteoarthritis |
title_full |
Discovery of N-glycan Biomarkers for the Canine Osteoarthritis |
title_fullStr |
Discovery of N-glycan Biomarkers for the Canine Osteoarthritis |
title_full_unstemmed |
Discovery of N-glycan Biomarkers for the Canine Osteoarthritis |
title_sort |
discovery of n-glycan biomarkers for the canine osteoarthritis |
publisher |
MDPI AG |
series |
Life |
issn |
2075-1729 |
publishDate |
2020-09-01 |
description |
Protein glycosylation is a post-translational modification that impacts on protein activity, stability, and interactions. It was sensitively altered by the cellular state and, therefore, is now used for a diagnostic or prognostic indicator of various human diseases such as cancer. To evaluate the clinical feasibility in the veterinary area, the N-glycan biomarkers were discovered from canine serum for the diagnosis of osteoarthritis (OA), which is one of the most common diseases of dogs. N-glycome was obtained from 20 μL of canine serum by the enzymatic cleavage followed by the purification and enrichment using solid-phase extraction. Independent compositions of 163 and 463 N-glycans were found from healthy control (n = 41) and osteoarthritis patients (n = 92), respectively. Initially, 31 of the potential biomarkers were screened by the <i>p</i>-values below 1.0 × 10<sup>−10</sup> from ANOVA. Then, the area under the curve (AUC) and the intensity ratio between OA patient and healthy control (P/C ratio) were calculated. Considering the diagnostic efficacy, the AUC bigger than 0.9 and the P/C ratio larger than 3.0 were used to discover 16 N-glycans as diagnostic biomarkers. Particularly, five of the diagnostic biomarkers were AUC above 0.99 and three of N-glycans had AUC 1.0. The results suggest a clear possibility for N-glycan biomarkers to be used as a clinical tool in the veterinary medical area enabling to provide objective and non-invasive diagnostic information. |
topic |
N-glycan serum canine osteoarthritis mass spectrometry biomarker |
url |
https://www.mdpi.com/2075-1729/10/9/199 |
work_keys_str_mv |
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1724671573632221184 |