A rapid and sensitive recombinase aided amplification assay to detect hepatitis B virus without DNA extraction

• Main Authors: Xin-xin Shen, Fang-zhou Qiu, Li-Ping Shen, Ten-fei Yan, Meng-chuan Zhao, Ju-Ju Qi, Chen Chen, Li Zhao, Le Wang, Zhi-shan Feng, Xue-jun Ma
• Format: Article
• Language: English
• Published: BMC 2019-03-01
• Series: BMC Infectious Diseases
• Subjects: Hepatitis B virus; Detection; Recombinase aided amplification
• Online Access: http://link.springer.com/article/10.1186/s12879-019-3814-9

Abstract Background Hepatitis B virus (HBV) infection is the major public health problem worldwide. In clinical practice, serological and molecular assays are the most commonly used diagnostic methods to detect HBV infection in clinical practices. Methods Here we present a rapid and sensitive recombinase aided amplification assay (RAA) to detect HBV at 39.0 °C for 30 min without DNA extraction from serum samples. The analytical sensitivity of RAA assay was 100 copies per reaction and showed no cross reaction with human immunodeficiency virus (HIV) and hepatitis C virus (HCV). The universality of RAA assay was validated by testing of 41 archived serum samples with predefined HBV genotypes (B, C and D). Results A total of 130 archived suspected HBV infected serum samples were detected by commercial qPCR with DNA extraction and RAA assay without DNA extraction (heat-treatment). Compared with qPCR assay as a reference, the RAA assay obtained 95.7% sensitivity and 100% specificity and a kappa value of 0.818. Conclusions We developed a rapid, convenient, highly sensitive and specific method to detect HBV without DNA extraction in clinical samples. This RAA method of HBV detection is very suitable for clinical testing.