Simultaneous detection of Legionella species and Legionella pneumophila by duplex PCR (dPCR) assay in cooling tower water samples from Jakarta, Indonesia

<p><strong>Aim:</strong> Since culture method is time-consuming and has low  sensitivity, we developed a duplex PCR (dPCR) assay for the detection of Legionella sp. and L. pneumophila in cooling tower samples. We used culture method as a gold standard.</p><p><strong&...

Full description

Bibliographic Details
Main Authors: Andi Yasmon, Yusmaniar Yusmaniar, Anis Anis, Budiman Bela
Format: Article
Language:English
Published: Faculty of Medicine Universitas Indonesia 2010-11-01
Series:Medical Journal of Indonesia
Online Access:http://mji.ui.ac.id/journal/index.php/mji/article/view/408
id doaj-a2f4efcff9384c72b49043ab65017fc2
record_format Article
spelling doaj-a2f4efcff9384c72b49043ab65017fc22020-11-25T02:20:04ZengFaculty of Medicine Universitas Indonesia Medical Journal of Indonesia0853-17732252-80832010-11-01194223710.13181/mji.v19i4.408405Simultaneous detection of Legionella species and Legionella pneumophila by duplex PCR (dPCR) assay in cooling tower water samples from Jakarta, IndonesiaAndi YasmonYusmaniar YusmaniarAnis AnisBudiman Bela<p><strong>Aim:</strong> Since culture method is time-consuming and has low  sensitivity, we developed a duplex PCR (dPCR) assay for the detection of Legionella sp. and L. pneumophila in cooling tower samples. We used culture method as a gold standard.</p><p><strong>Methods:</strong> Optimization of dPCR method was performed to obtain an assay with high sensitivity and specifi city. The optimized method was used to detect Legionella sp. dan L. pneumophila in 9 samples obtained from 9 buildings in Jakarta. For culture method, the bacteria were grown or isolated on selective growth factor supplemented-buffered charcoal yeast extract (BCYE) media.</p><p><strong>Results:</strong> Of 9 samples tested by dPCR assay, 6 were positive for Legionella species,1 was positive for L. pneumophila, and 2 showed negative results. For the same samples, no Legionella sp. was detected by the culture method.</p><p><strong>Conclusion</strong>: dPCR assay was much more sensitive than the culture method and was potentially used as a rapid, specifi c and sensitive test for routine detection of Legionella sp. dan for L. pneumophila in water samples. <em><strong>(Med J Indones 2010; 19:223-7)</strong></em></p><p><strong>Keywords:</strong><em> BCYE media, mip gene, 16S-rRNA gene</em></p>http://mji.ui.ac.id/journal/index.php/mji/article/view/408
collection DOAJ
language English
format Article
sources DOAJ
author Andi Yasmon
Yusmaniar Yusmaniar
Anis Anis
Budiman Bela
spellingShingle Andi Yasmon
Yusmaniar Yusmaniar
Anis Anis
Budiman Bela
Simultaneous detection of Legionella species and Legionella pneumophila by duplex PCR (dPCR) assay in cooling tower water samples from Jakarta, Indonesia
Medical Journal of Indonesia
author_facet Andi Yasmon
Yusmaniar Yusmaniar
Anis Anis
Budiman Bela
author_sort Andi Yasmon
title Simultaneous detection of Legionella species and Legionella pneumophila by duplex PCR (dPCR) assay in cooling tower water samples from Jakarta, Indonesia
title_short Simultaneous detection of Legionella species and Legionella pneumophila by duplex PCR (dPCR) assay in cooling tower water samples from Jakarta, Indonesia
title_full Simultaneous detection of Legionella species and Legionella pneumophila by duplex PCR (dPCR) assay in cooling tower water samples from Jakarta, Indonesia
title_fullStr Simultaneous detection of Legionella species and Legionella pneumophila by duplex PCR (dPCR) assay in cooling tower water samples from Jakarta, Indonesia
title_full_unstemmed Simultaneous detection of Legionella species and Legionella pneumophila by duplex PCR (dPCR) assay in cooling tower water samples from Jakarta, Indonesia
title_sort simultaneous detection of legionella species and legionella pneumophila by duplex pcr (dpcr) assay in cooling tower water samples from jakarta, indonesia
publisher Faculty of Medicine Universitas Indonesia
series Medical Journal of Indonesia
issn 0853-1773
2252-8083
publishDate 2010-11-01
description <p><strong>Aim:</strong> Since culture method is time-consuming and has low  sensitivity, we developed a duplex PCR (dPCR) assay for the detection of Legionella sp. and L. pneumophila in cooling tower samples. We used culture method as a gold standard.</p><p><strong>Methods:</strong> Optimization of dPCR method was performed to obtain an assay with high sensitivity and specifi city. The optimized method was used to detect Legionella sp. dan L. pneumophila in 9 samples obtained from 9 buildings in Jakarta. For culture method, the bacteria were grown or isolated on selective growth factor supplemented-buffered charcoal yeast extract (BCYE) media.</p><p><strong>Results:</strong> Of 9 samples tested by dPCR assay, 6 were positive for Legionella species,1 was positive for L. pneumophila, and 2 showed negative results. For the same samples, no Legionella sp. was detected by the culture method.</p><p><strong>Conclusion</strong>: dPCR assay was much more sensitive than the culture method and was potentially used as a rapid, specifi c and sensitive test for routine detection of Legionella sp. dan for L. pneumophila in water samples. <em><strong>(Med J Indones 2010; 19:223-7)</strong></em></p><p><strong>Keywords:</strong><em> BCYE media, mip gene, 16S-rRNA gene</em></p>
url http://mji.ui.ac.id/journal/index.php/mji/article/view/408
work_keys_str_mv AT andiyasmon simultaneousdetectionoflegionellaspeciesandlegionellapneumophilabyduplexpcrdpcrassayincoolingtowerwatersamplesfromjakartaindonesia
AT yusmaniaryusmaniar simultaneousdetectionoflegionellaspeciesandlegionellapneumophilabyduplexpcrdpcrassayincoolingtowerwatersamplesfromjakartaindonesia
AT anisanis simultaneousdetectionoflegionellaspeciesandlegionellapneumophilabyduplexpcrdpcrassayincoolingtowerwatersamplesfromjakartaindonesia
AT budimanbela simultaneousdetectionoflegionellaspeciesandlegionellapneumophilabyduplexpcrdpcrassayincoolingtowerwatersamplesfromjakartaindonesia
_version_ 1724873671501152256