A simple generative model of the mouse mesoscale connectome
Recent technological advances now allow for the collection of vast data sets detailing the intricate neural connectivity patterns of various organisms. Oh et al. (2014) recently published the most complete description of the mouse mesoscale connectome acquired to date. Here we give an in-depth chara...
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doaj-a3f0991af8fd4e1fa0e7dc2e377b61b22021-05-05T00:18:36ZengeLife Sciences Publications LtdeLife2050-084X2016-03-01510.7554/eLife.12366A simple generative model of the mouse mesoscale connectomeSid Henriksen0https://orcid.org/0000-0002-4335-4218Rich Pang1https://orcid.org/0000-0002-2644-6110Mark Wronkiewicz2https://orcid.org/0000-0002-6521-3256Laboratory of Sensorimotor Research, National Eye Institute, National Institutes of Health, Bethesda, United States; Institute of Neuroscience, Newcastle University, Newcastle upon Tyne, United KingdomGraduate Program in Neuroscience, University of Washington, Seattle, United StatesGraduate Program in Neuroscience, University of Washington, Seattle, United StatesRecent technological advances now allow for the collection of vast data sets detailing the intricate neural connectivity patterns of various organisms. Oh et al. (2014) recently published the most complete description of the mouse mesoscale connectome acquired to date. Here we give an in-depth characterization of this connectome and propose a generative network model which utilizes two elemental organizational principles: proximal attachment ‒ outgoing connections are more likely to attach to nearby nodes than to distant ones, and source growth ‒ nodes with many outgoing connections are likely to form new outgoing connections. We show that this model captures essential principles governing network organization at the mesoscale level in the mouse brain and is consistent with biologically plausible developmental processes.https://elifesciences.org/articles/12366mouse connectomemesoscalenetwork analysisgraph theorysource growthproximal attachment |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Sid Henriksen Rich Pang Mark Wronkiewicz |
spellingShingle |
Sid Henriksen Rich Pang Mark Wronkiewicz A simple generative model of the mouse mesoscale connectome eLife mouse connectome mesoscale network analysis graph theory source growth proximal attachment |
author_facet |
Sid Henriksen Rich Pang Mark Wronkiewicz |
author_sort |
Sid Henriksen |
title |
A simple generative model of the mouse mesoscale connectome |
title_short |
A simple generative model of the mouse mesoscale connectome |
title_full |
A simple generative model of the mouse mesoscale connectome |
title_fullStr |
A simple generative model of the mouse mesoscale connectome |
title_full_unstemmed |
A simple generative model of the mouse mesoscale connectome |
title_sort |
simple generative model of the mouse mesoscale connectome |
publisher |
eLife Sciences Publications Ltd |
series |
eLife |
issn |
2050-084X |
publishDate |
2016-03-01 |
description |
Recent technological advances now allow for the collection of vast data sets detailing the intricate neural connectivity patterns of various organisms. Oh et al. (2014) recently published the most complete description of the mouse mesoscale connectome acquired to date. Here we give an in-depth characterization of this connectome and propose a generative network model which utilizes two elemental organizational principles: proximal attachment ‒ outgoing connections are more likely to attach to nearby nodes than to distant ones, and source growth ‒ nodes with many outgoing connections are likely to form new outgoing connections. We show that this model captures essential principles governing network organization at the mesoscale level in the mouse brain and is consistent with biologically plausible developmental processes. |
topic |
mouse connectome mesoscale network analysis graph theory source growth proximal attachment |
url |
https://elifesciences.org/articles/12366 |
work_keys_str_mv |
AT sidhenriksen asimplegenerativemodelofthemousemesoscaleconnectome AT richpang asimplegenerativemodelofthemousemesoscaleconnectome AT markwronkiewicz asimplegenerativemodelofthemousemesoscaleconnectome AT sidhenriksen simplegenerativemodelofthemousemesoscaleconnectome AT richpang simplegenerativemodelofthemousemesoscaleconnectome AT markwronkiewicz simplegenerativemodelofthemousemesoscaleconnectome |
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