A simple generative model of the mouse mesoscale connectome

Recent technological advances now allow for the collection of vast data sets detailing the intricate neural connectivity patterns of various organisms. Oh et al. (2014) recently published the most complete description of the mouse mesoscale connectome acquired to date. Here we give an in-depth chara...

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Main Authors: Sid Henriksen, Rich Pang, Mark Wronkiewicz
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2016-03-01
Series:eLife
Subjects:
Online Access:https://elifesciences.org/articles/12366
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spelling doaj-a3f0991af8fd4e1fa0e7dc2e377b61b22021-05-05T00:18:36ZengeLife Sciences Publications LtdeLife2050-084X2016-03-01510.7554/eLife.12366A simple generative model of the mouse mesoscale connectomeSid Henriksen0https://orcid.org/0000-0002-4335-4218Rich Pang1https://orcid.org/0000-0002-2644-6110Mark Wronkiewicz2https://orcid.org/0000-0002-6521-3256Laboratory of Sensorimotor Research, National Eye Institute, National Institutes of Health, Bethesda, United States; Institute of Neuroscience, Newcastle University, Newcastle upon Tyne, United KingdomGraduate Program in Neuroscience, University of Washington, Seattle, United StatesGraduate Program in Neuroscience, University of Washington, Seattle, United StatesRecent technological advances now allow for the collection of vast data sets detailing the intricate neural connectivity patterns of various organisms. Oh et al. (2014) recently published the most complete description of the mouse mesoscale connectome acquired to date. Here we give an in-depth characterization of this connectome and propose a generative network model which utilizes two elemental organizational principles: proximal attachment ‒ outgoing connections are more likely to attach to nearby nodes than to distant ones, and source growth ‒ nodes with many outgoing connections are likely to form new outgoing connections. We show that this model captures essential principles governing network organization at the mesoscale level in the mouse brain and is consistent with biologically plausible developmental processes.https://elifesciences.org/articles/12366mouse connectomemesoscalenetwork analysisgraph theorysource growthproximal attachment
collection DOAJ
language English
format Article
sources DOAJ
author Sid Henriksen
Rich Pang
Mark Wronkiewicz
spellingShingle Sid Henriksen
Rich Pang
Mark Wronkiewicz
A simple generative model of the mouse mesoscale connectome
eLife
mouse connectome
mesoscale
network analysis
graph theory
source growth
proximal attachment
author_facet Sid Henriksen
Rich Pang
Mark Wronkiewicz
author_sort Sid Henriksen
title A simple generative model of the mouse mesoscale connectome
title_short A simple generative model of the mouse mesoscale connectome
title_full A simple generative model of the mouse mesoscale connectome
title_fullStr A simple generative model of the mouse mesoscale connectome
title_full_unstemmed A simple generative model of the mouse mesoscale connectome
title_sort simple generative model of the mouse mesoscale connectome
publisher eLife Sciences Publications Ltd
series eLife
issn 2050-084X
publishDate 2016-03-01
description Recent technological advances now allow for the collection of vast data sets detailing the intricate neural connectivity patterns of various organisms. Oh et al. (2014) recently published the most complete description of the mouse mesoscale connectome acquired to date. Here we give an in-depth characterization of this connectome and propose a generative network model which utilizes two elemental organizational principles: proximal attachment ‒ outgoing connections are more likely to attach to nearby nodes than to distant ones, and source growth ‒ nodes with many outgoing connections are likely to form new outgoing connections. We show that this model captures essential principles governing network organization at the mesoscale level in the mouse brain and is consistent with biologically plausible developmental processes.
topic mouse connectome
mesoscale
network analysis
graph theory
source growth
proximal attachment
url https://elifesciences.org/articles/12366
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AT markwronkiewicz asimplegenerativemodelofthemousemesoscaleconnectome
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