Development and Assessment of Loop-Mediated Isothermal Amplification (LAMP) Assay for the Diagnosis of Human Visceral Leishmaniasis in Iran

  Background: Parasitological methods for the diagnosis of Visceral leishmania-sis (VL) require invasive procedures, so serological and molecular approaches have been developed but are not generally applicable in the field. We evaluated a loop mediated isothermal amplification (LAMP) assay using...

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Main Authors: Mehrdad Ghasemian, Mohammad Javad Gharavi, Lame Akhlaghi, Mehdi Mohebali, Ahmad Reza Meamar, Ehsan Aryan, Hormozd Oormazdi
Format: Article
Language:English
Published: Tehran University of Medical Sciences 2014-03-01
Series:Iranian Journal of Parasitology
Subjects:
Online Access:https://ijpa.tums.ac.ir/index.php/ijpa/article/view/433
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spelling doaj-a4f3653ba00a4a089b3c8c54a507ffcc2021-04-02T15:44:35ZengTehran University of Medical SciencesIranian Journal of Parasitology1735-70202008-238X2014-03-0191412Development and Assessment of Loop-Mediated Isothermal Amplification (LAMP) Assay for the Diagnosis of Human Visceral Leishmaniasis in IranMehrdad Ghasemian0Mohammad Javad Gharavi1Lame Akhlaghi2Mehdi Mohebali3Ahmad Reza Meamar4Ehsan Aryan5Hormozd Oormazdi6Department of Parasitology and Mycology, Faculty of Medicine, Iran University of Medical Sciences, Tehran, Iran.Department of Parasitology, Faculty of Allied Medicine, Iran University of Medical Sciences, Tehran, Iran.Department of Parasitology and Mycology, Faculty of Medicine, Iran University of Medical Sciences, Tehran, Iran.Department of Parasitology, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran.Department of Parasitology and Mycology, Faculty of Medicine, Iran University of Medical Sciences, Tehran, Iran.Antimicrobial Resistance Research Center, Department of Medical Microbiology, Faculty of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.Department of Parasitology and Mycology, Faculty of Medicine, Iran University of Medical Sciences, Tehran, Iran.   Background: Parasitological methods for the diagnosis of Visceral leishmania-sis (VL) require invasive procedures, so serological and molecular approaches have been developed but are not generally applicable in the field. We evaluated a loop mediated isothermal amplification (LAMP) assay using blood from VL pa-tients and compared it to nested PCR. Methods: Forty-seven subjects with clinical features (fever, hepatosplenomegaly and anemia) were confirmed positive for VL by the direct agglutination test (DAT) at titers >3200. Forty DAT negative individuals from non-endemic areas with no clinical signs or symptoms of VL served as controls. A LAMP assay was performed using a set of six primers targeting Leishmania infantum kinetoplast DNA (kDNA) minicircle gene under isothermal (64 °C) conditions. For nested PCR we used primers targeting the kDNA minicircle gene. Results: The LAMP assay provided a detection limit of 1 parasite in 1 ml of peripheral blood and detected L. infantum DNA in 44 of 47 DAT-confirmed VL cases, with diagnostic sensitivity of 93.6% (95% CI). No L. infantum DNA was amplified in controls, indicating a specificity of 100%. The nested PCR yielded sensitivity of 96% (95% CI) and a specificity of 100% (95% CI). Conclusion: The LAMP assay gave results similar to those of nested PCR but in a shorter time. The LAMP method is simple; requires no sophisticated equip-ment; has a short reaction time; and results, indicated by turbidity of the reaction mixture, are observable with the naked eye. https://ijpa.tums.ac.ir/index.php/ijpa/article/view/433HumanIranLAMPNested PCRPeripheral bloodVisceral leishmaniasis
collection DOAJ
language English
format Article
sources DOAJ
author Mehrdad Ghasemian
Mohammad Javad Gharavi
Lame Akhlaghi
Mehdi Mohebali
Ahmad Reza Meamar
Ehsan Aryan
Hormozd Oormazdi
spellingShingle Mehrdad Ghasemian
Mohammad Javad Gharavi
Lame Akhlaghi
Mehdi Mohebali
Ahmad Reza Meamar
Ehsan Aryan
Hormozd Oormazdi
Development and Assessment of Loop-Mediated Isothermal Amplification (LAMP) Assay for the Diagnosis of Human Visceral Leishmaniasis in Iran
Iranian Journal of Parasitology
Human
Iran
LAMP
Nested PCR
Peripheral blood
Visceral leishmaniasis
author_facet Mehrdad Ghasemian
Mohammad Javad Gharavi
Lame Akhlaghi
Mehdi Mohebali
Ahmad Reza Meamar
Ehsan Aryan
Hormozd Oormazdi
author_sort Mehrdad Ghasemian
title Development and Assessment of Loop-Mediated Isothermal Amplification (LAMP) Assay for the Diagnosis of Human Visceral Leishmaniasis in Iran
title_short Development and Assessment of Loop-Mediated Isothermal Amplification (LAMP) Assay for the Diagnosis of Human Visceral Leishmaniasis in Iran
title_full Development and Assessment of Loop-Mediated Isothermal Amplification (LAMP) Assay for the Diagnosis of Human Visceral Leishmaniasis in Iran
title_fullStr Development and Assessment of Loop-Mediated Isothermal Amplification (LAMP) Assay for the Diagnosis of Human Visceral Leishmaniasis in Iran
title_full_unstemmed Development and Assessment of Loop-Mediated Isothermal Amplification (LAMP) Assay for the Diagnosis of Human Visceral Leishmaniasis in Iran
title_sort development and assessment of loop-mediated isothermal amplification (lamp) assay for the diagnosis of human visceral leishmaniasis in iran
publisher Tehran University of Medical Sciences
series Iranian Journal of Parasitology
issn 1735-7020
2008-238X
publishDate 2014-03-01
description   Background: Parasitological methods for the diagnosis of Visceral leishmania-sis (VL) require invasive procedures, so serological and molecular approaches have been developed but are not generally applicable in the field. We evaluated a loop mediated isothermal amplification (LAMP) assay using blood from VL pa-tients and compared it to nested PCR. Methods: Forty-seven subjects with clinical features (fever, hepatosplenomegaly and anemia) were confirmed positive for VL by the direct agglutination test (DAT) at titers >3200. Forty DAT negative individuals from non-endemic areas with no clinical signs or symptoms of VL served as controls. A LAMP assay was performed using a set of six primers targeting Leishmania infantum kinetoplast DNA (kDNA) minicircle gene under isothermal (64 °C) conditions. For nested PCR we used primers targeting the kDNA minicircle gene. Results: The LAMP assay provided a detection limit of 1 parasite in 1 ml of peripheral blood and detected L. infantum DNA in 44 of 47 DAT-confirmed VL cases, with diagnostic sensitivity of 93.6% (95% CI). No L. infantum DNA was amplified in controls, indicating a specificity of 100%. The nested PCR yielded sensitivity of 96% (95% CI) and a specificity of 100% (95% CI). Conclusion: The LAMP assay gave results similar to those of nested PCR but in a shorter time. The LAMP method is simple; requires no sophisticated equip-ment; has a short reaction time; and results, indicated by turbidity of the reaction mixture, are observable with the naked eye.
topic Human
Iran
LAMP
Nested PCR
Peripheral blood
Visceral leishmaniasis
url https://ijpa.tums.ac.ir/index.php/ijpa/article/view/433
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