Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses
This review gives an overview on the development of research on spider venoms with a focus on structure and function of venom components and techniques of analysis. Major venom component groups are small molecular mass compounds, antimicrobial (also called cytolytic, or cationic) peptides (only in s...
Main Authors: | , , |
---|---|
Format: | Article |
Language: | English |
Published: |
MDPI AG
2019-10-01
|
Series: | Toxins |
Subjects: | |
Online Access: | https://www.mdpi.com/2072-6651/11/10/611 |
id |
doaj-a5b648127fc244079918dc400b3252c7 |
---|---|
record_format |
Article |
spelling |
doaj-a5b648127fc244079918dc400b3252c72020-11-25T01:23:41ZengMDPI AGToxins2072-66512019-10-01111061110.3390/toxins11100611toxins11100611Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic AnalysesNicolas Langenegger0Wolfgang Nentwig1Lucia Kuhn-Nentwig2Institute of Ecology and Evolution, University of Bern, Baltzerstrasse 6, CH-3012 Bern, SwitzerlandInstitute of Ecology and Evolution, University of Bern, Baltzerstrasse 6, CH-3012 Bern, SwitzerlandInstitute of Ecology and Evolution, University of Bern, Baltzerstrasse 6, CH-3012 Bern, SwitzerlandThis review gives an overview on the development of research on spider venoms with a focus on structure and function of venom components and techniques of analysis. Major venom component groups are small molecular mass compounds, antimicrobial (also called cytolytic, or cationic) peptides (only in some spider families), cysteine-rich (neurotoxic) peptides, and enzymes and proteins. Cysteine-rich peptides are reviewed with respect to various structural motifs, their targets (ion channels, membrane receptors), nomenclature, and molecular binding. We further describe the latest findings concerning the maturation of antimicrobial, and cysteine-rich peptides that are in most known cases expressed as propeptide-containing precursors. Today, venom research, increasingly employs transcriptomic and mass spectrometric techniques. Pros and cons of venom gland transcriptome analysis with Sanger, 454, and Illumina sequencing are discussed and an overview on so far published transcriptome studies is given. In this respect, we also discuss the only recently described cross contamination arising from multiplexing in Illumina sequencing and its possible impacts on venom studies. High throughput mass spectrometric analysis of venom proteomes (bottom-up, top-down) are reviewed.https://www.mdpi.com/2072-6651/11/10/611neurotoxinsproteomicsvenomicstranscriptomicsmass spectrometrybioinformaticsaraneaespiders |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Nicolas Langenegger Wolfgang Nentwig Lucia Kuhn-Nentwig |
spellingShingle |
Nicolas Langenegger Wolfgang Nentwig Lucia Kuhn-Nentwig Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses Toxins neurotoxins proteomics venomics transcriptomics mass spectrometry bioinformatics araneae spiders |
author_facet |
Nicolas Langenegger Wolfgang Nentwig Lucia Kuhn-Nentwig |
author_sort |
Nicolas Langenegger |
title |
Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses |
title_short |
Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses |
title_full |
Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses |
title_fullStr |
Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses |
title_full_unstemmed |
Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses |
title_sort |
spider venom: components, modes of action, and novel strategies in transcriptomic and proteomic analyses |
publisher |
MDPI AG |
series |
Toxins |
issn |
2072-6651 |
publishDate |
2019-10-01 |
description |
This review gives an overview on the development of research on spider venoms with a focus on structure and function of venom components and techniques of analysis. Major venom component groups are small molecular mass compounds, antimicrobial (also called cytolytic, or cationic) peptides (only in some spider families), cysteine-rich (neurotoxic) peptides, and enzymes and proteins. Cysteine-rich peptides are reviewed with respect to various structural motifs, their targets (ion channels, membrane receptors), nomenclature, and molecular binding. We further describe the latest findings concerning the maturation of antimicrobial, and cysteine-rich peptides that are in most known cases expressed as propeptide-containing precursors. Today, venom research, increasingly employs transcriptomic and mass spectrometric techniques. Pros and cons of venom gland transcriptome analysis with Sanger, 454, and Illumina sequencing are discussed and an overview on so far published transcriptome studies is given. In this respect, we also discuss the only recently described cross contamination arising from multiplexing in Illumina sequencing and its possible impacts on venom studies. High throughput mass spectrometric analysis of venom proteomes (bottom-up, top-down) are reviewed. |
topic |
neurotoxins proteomics venomics transcriptomics mass spectrometry bioinformatics araneae spiders |
url |
https://www.mdpi.com/2072-6651/11/10/611 |
work_keys_str_mv |
AT nicolaslangenegger spidervenomcomponentsmodesofactionandnovelstrategiesintranscriptomicandproteomicanalyses AT wolfgangnentwig spidervenomcomponentsmodesofactionandnovelstrategiesintranscriptomicandproteomicanalyses AT luciakuhnnentwig spidervenomcomponentsmodesofactionandnovelstrategiesintranscriptomicandproteomicanalyses |
_version_ |
1725120529094934528 |