Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses

This review gives an overview on the development of research on spider venoms with a focus on structure and function of venom components and techniques of analysis. Major venom component groups are small molecular mass compounds, antimicrobial (also called cytolytic, or cationic) peptides (only in s...

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Main Authors: Nicolas Langenegger, Wolfgang Nentwig, Lucia Kuhn-Nentwig
Format: Article
Language:English
Published: MDPI AG 2019-10-01
Series:Toxins
Subjects:
Online Access:https://www.mdpi.com/2072-6651/11/10/611
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spelling doaj-a5b648127fc244079918dc400b3252c72020-11-25T01:23:41ZengMDPI AGToxins2072-66512019-10-01111061110.3390/toxins11100611toxins11100611Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic AnalysesNicolas Langenegger0Wolfgang Nentwig1Lucia Kuhn-Nentwig2Institute of Ecology and Evolution, University of Bern, Baltzerstrasse 6, CH-3012 Bern, SwitzerlandInstitute of Ecology and Evolution, University of Bern, Baltzerstrasse 6, CH-3012 Bern, SwitzerlandInstitute of Ecology and Evolution, University of Bern, Baltzerstrasse 6, CH-3012 Bern, SwitzerlandThis review gives an overview on the development of research on spider venoms with a focus on structure and function of venom components and techniques of analysis. Major venom component groups are small molecular mass compounds, antimicrobial (also called cytolytic, or cationic) peptides (only in some spider families), cysteine-rich (neurotoxic) peptides, and enzymes and proteins. Cysteine-rich peptides are reviewed with respect to various structural motifs, their targets (ion channels, membrane receptors), nomenclature, and molecular binding. We further describe the latest findings concerning the maturation of antimicrobial, and cysteine-rich peptides that are in most known cases expressed as propeptide-containing precursors. Today, venom research, increasingly employs transcriptomic and mass spectrometric techniques. Pros and cons of venom gland transcriptome analysis with Sanger, 454, and Illumina sequencing are discussed and an overview on so far published transcriptome studies is given. In this respect, we also discuss the only recently described cross contamination arising from multiplexing in Illumina sequencing and its possible impacts on venom studies. High throughput mass spectrometric analysis of venom proteomes (bottom-up, top-down) are reviewed.https://www.mdpi.com/2072-6651/11/10/611neurotoxinsproteomicsvenomicstranscriptomicsmass spectrometrybioinformaticsaraneaespiders
collection DOAJ
language English
format Article
sources DOAJ
author Nicolas Langenegger
Wolfgang Nentwig
Lucia Kuhn-Nentwig
spellingShingle Nicolas Langenegger
Wolfgang Nentwig
Lucia Kuhn-Nentwig
Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses
Toxins
neurotoxins
proteomics
venomics
transcriptomics
mass spectrometry
bioinformatics
araneae
spiders
author_facet Nicolas Langenegger
Wolfgang Nentwig
Lucia Kuhn-Nentwig
author_sort Nicolas Langenegger
title Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses
title_short Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses
title_full Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses
title_fullStr Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses
title_full_unstemmed Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses
title_sort spider venom: components, modes of action, and novel strategies in transcriptomic and proteomic analyses
publisher MDPI AG
series Toxins
issn 2072-6651
publishDate 2019-10-01
description This review gives an overview on the development of research on spider venoms with a focus on structure and function of venom components and techniques of analysis. Major venom component groups are small molecular mass compounds, antimicrobial (also called cytolytic, or cationic) peptides (only in some spider families), cysteine-rich (neurotoxic) peptides, and enzymes and proteins. Cysteine-rich peptides are reviewed with respect to various structural motifs, their targets (ion channels, membrane receptors), nomenclature, and molecular binding. We further describe the latest findings concerning the maturation of antimicrobial, and cysteine-rich peptides that are in most known cases expressed as propeptide-containing precursors. Today, venom research, increasingly employs transcriptomic and mass spectrometric techniques. Pros and cons of venom gland transcriptome analysis with Sanger, 454, and Illumina sequencing are discussed and an overview on so far published transcriptome studies is given. In this respect, we also discuss the only recently described cross contamination arising from multiplexing in Illumina sequencing and its possible impacts on venom studies. High throughput mass spectrometric analysis of venom proteomes (bottom-up, top-down) are reviewed.
topic neurotoxins
proteomics
venomics
transcriptomics
mass spectrometry
bioinformatics
araneae
spiders
url https://www.mdpi.com/2072-6651/11/10/611
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AT luciakuhnnentwig spidervenomcomponentsmodesofactionandnovelstrategiesintranscriptomicandproteomicanalyses
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