Discrimination of plant root zone water status in greenhouse production based on phenotyping and machine learning techniques

Abstract Plant-based sensing on water stress can provide sensitive and direct reference for precision irrigation system in greenhouse. However, plant information acquisition, interpretation, and systematical application remain insufficient. This study developed a discrimination method for plant root...

Full description

Bibliographic Details
Main Authors: Doudou Guo, Jiaxiang Juan, Liying Chang, Jingjin Zhang, Danfeng Huang
Format: Article
Language:English
Published: Nature Publishing Group 2017-08-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-017-08235-z
id doaj-a649e22387c54bcaa8eb6c90b0749085
record_format Article
spelling doaj-a649e22387c54bcaa8eb6c90b07490852020-12-08T02:21:32ZengNature Publishing GroupScientific Reports2045-23222017-08-017111210.1038/s41598-017-08235-zDiscrimination of plant root zone water status in greenhouse production based on phenotyping and machine learning techniquesDoudou Guo0Jiaxiang Juan1Liying Chang2Jingjin Zhang3Danfeng Huang4School of agriculture and biology, Shanghai Jiao Tong UniversitySchool of agriculture and biology, Shanghai Jiao Tong UniversitySchool of agriculture and biology, Shanghai Jiao Tong UniversitySchool of agriculture and biology, Shanghai Jiao Tong UniversitySchool of agriculture and biology, Shanghai Jiao Tong UniversityAbstract Plant-based sensing on water stress can provide sensitive and direct reference for precision irrigation system in greenhouse. However, plant information acquisition, interpretation, and systematical application remain insufficient. This study developed a discrimination method for plant root zone water status in greenhouse by integrating phenotyping and machine learning techniques. Pakchoi plants were used and treated by three root zone moisture levels, 40%, 60%, and 80% relative water content. Three classification models, Random Forest (RF), Neural Network (NN), and Support Vector Machine (SVM) were developed and validated in different scenarios with overall accuracy over 90% for all. SVM model had the highest value, but it required the longest training time. All models had accuracy over 85% in all scenarios, and more stable performance was observed in RF model. Simplified SVM model developed by the top five most contributing traits had the largest accuracy reduction as 29.5%, while simplified RF and NN model still maintained approximately 80%. For real case application, factors such as operation cost, precision requirement, and system reaction time should be synthetically considered in model selection. Our work shows it is promising to discriminate plant root zone water status by implementing phenotyping and machine learning techniques for precision irrigation management.https://doi.org/10.1038/s41598-017-08235-z
collection DOAJ
language English
format Article
sources DOAJ
author Doudou Guo
Jiaxiang Juan
Liying Chang
Jingjin Zhang
Danfeng Huang
spellingShingle Doudou Guo
Jiaxiang Juan
Liying Chang
Jingjin Zhang
Danfeng Huang
Discrimination of plant root zone water status in greenhouse production based on phenotyping and machine learning techniques
Scientific Reports
author_facet Doudou Guo
Jiaxiang Juan
Liying Chang
Jingjin Zhang
Danfeng Huang
author_sort Doudou Guo
title Discrimination of plant root zone water status in greenhouse production based on phenotyping and machine learning techniques
title_short Discrimination of plant root zone water status in greenhouse production based on phenotyping and machine learning techniques
title_full Discrimination of plant root zone water status in greenhouse production based on phenotyping and machine learning techniques
title_fullStr Discrimination of plant root zone water status in greenhouse production based on phenotyping and machine learning techniques
title_full_unstemmed Discrimination of plant root zone water status in greenhouse production based on phenotyping and machine learning techniques
title_sort discrimination of plant root zone water status in greenhouse production based on phenotyping and machine learning techniques
publisher Nature Publishing Group
series Scientific Reports
issn 2045-2322
publishDate 2017-08-01
description Abstract Plant-based sensing on water stress can provide sensitive and direct reference for precision irrigation system in greenhouse. However, plant information acquisition, interpretation, and systematical application remain insufficient. This study developed a discrimination method for plant root zone water status in greenhouse by integrating phenotyping and machine learning techniques. Pakchoi plants were used and treated by three root zone moisture levels, 40%, 60%, and 80% relative water content. Three classification models, Random Forest (RF), Neural Network (NN), and Support Vector Machine (SVM) were developed and validated in different scenarios with overall accuracy over 90% for all. SVM model had the highest value, but it required the longest training time. All models had accuracy over 85% in all scenarios, and more stable performance was observed in RF model. Simplified SVM model developed by the top five most contributing traits had the largest accuracy reduction as 29.5%, while simplified RF and NN model still maintained approximately 80%. For real case application, factors such as operation cost, precision requirement, and system reaction time should be synthetically considered in model selection. Our work shows it is promising to discriminate plant root zone water status by implementing phenotyping and machine learning techniques for precision irrigation management.
url https://doi.org/10.1038/s41598-017-08235-z
work_keys_str_mv AT doudouguo discriminationofplantrootzonewaterstatusingreenhouseproductionbasedonphenotypingandmachinelearningtechniques
AT jiaxiangjuan discriminationofplantrootzonewaterstatusingreenhouseproductionbasedonphenotypingandmachinelearningtechniques
AT liyingchang discriminationofplantrootzonewaterstatusingreenhouseproductionbasedonphenotypingandmachinelearningtechniques
AT jingjinzhang discriminationofplantrootzonewaterstatusingreenhouseproductionbasedonphenotypingandmachinelearningtechniques
AT danfenghuang discriminationofplantrootzonewaterstatusingreenhouseproductionbasedonphenotypingandmachinelearningtechniques
_version_ 1724393872604266496