Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae)
Premise of the study: Microsatellite loci were isolated and characterized for Brazilian rosewood (<i>Aniba rosaeodora</i>), an endangered neotropical hardwood tree, to investigate population and conservation genetics of this highly valuable nontimber forest resource. Methods and Results...
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doaj-a71b561ee9c642438aaf02548aae53972020-11-25T01:34:29ZengWileyApplications in Plant Sciences2168-04502013-09-0119120051610.3732/apps.1200516Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae)Rafael C. Angrizani0Luis A. S. Contim1Maristerra R. Lemes2Laboratório de Genética e Biologia Reprodutiva de Plantas (LabGen), Instituto Nacional de Pesquisas da Amazônia (INPA), Avenida André Araújo 2936, 69060-001 Manaus, Amazonas, BrazilLaboratório de Genética, Universidade Federal de Goiás, Campus Jataí, Unidade Jatobá, BR 364, Km 192, Setor Industrial, 75801-615 Jataí, Goiás, BrazilLaboratório de Genética e Biologia Reprodutiva de Plantas (LabGen), Instituto Nacional de Pesquisas da Amazônia (INPA), Avenida André Araújo 2936, 69060-001 Manaus, Amazonas, Brazil; Current address: Instituto de Pesquisas Jardim Botânico do Rio de Janeiro, Rua Pacheco Leão 915, Jardim Botânico, 22460-030 Rio de Janeiro, Rio de Janeiro, BrazilPremise of the study: Microsatellite loci were isolated and characterized for Brazilian rosewood (<i>Aniba rosaeodora</i>), an endangered neotropical hardwood tree, to investigate population and conservation genetics of this highly valuable nontimber forest resource. Methods and Results: We used an enriched genomic library method to isolate and characterize 11 nuclear microsatellite loci for <i>A. rosaeodora</i>, which exhibited an average of 9.6 and 8.7 alleles per locus in two populations from central Amazonia. Mean observed and expected heterozygosities over the 11 loci were 0.604 and 0.687, and 0.807 and 0.828, respectively, in the two populations. Conclusions: The polymorphic microsatellite loci developed for <i>A. rosaeodora</i> showed highly informative content and can be used as a powerful tool in genetic diversity and population structure, gene flow, and mating system studies for conservation purposes.http://www.bioone.org/doi/full/10.3732/apps.1200516AmazoniaAniba rosaeodoraBrazilian rosewoodneotropical treenontimber forest products (NTFP)simple sequence repeat (SSR) loci |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Rafael C. Angrizani Luis A. S. Contim Maristerra R. Lemes |
spellingShingle |
Rafael C. Angrizani Luis A. S. Contim Maristerra R. Lemes Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae) Applications in Plant Sciences Amazonia Aniba rosaeodora Brazilian rosewood neotropical tree nontimber forest products (NTFP) simple sequence repeat (SSR) loci |
author_facet |
Rafael C. Angrizani Luis A. S. Contim Maristerra R. Lemes |
author_sort |
Rafael C. Angrizani |
title |
Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae) |
title_short |
Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae) |
title_full |
Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae) |
title_fullStr |
Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae) |
title_full_unstemmed |
Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae) |
title_sort |
development and characterization of microsatellite markers for the endangered amazonian tree <i>aniba rosaeodora</i> (lauraceae) |
publisher |
Wiley |
series |
Applications in Plant Sciences |
issn |
2168-0450 |
publishDate |
2013-09-01 |
description |
Premise of the study: Microsatellite loci were isolated and characterized for Brazilian rosewood (<i>Aniba rosaeodora</i>), an endangered neotropical hardwood tree, to investigate population and conservation genetics of this highly valuable nontimber forest resource.
Methods and Results: We used an enriched genomic library method to isolate and characterize 11 nuclear microsatellite loci for <i>A. rosaeodora</i>, which exhibited an average of 9.6 and 8.7 alleles per locus in two populations from central Amazonia. Mean observed and expected heterozygosities over the 11 loci were 0.604 and 0.687, and 0.807 and 0.828, respectively, in the two populations.
Conclusions: The polymorphic microsatellite loci developed for <i>A. rosaeodora</i> showed highly informative content and can be used as a powerful tool in genetic diversity and population structure, gene flow, and mating system studies for conservation purposes. |
topic |
Amazonia Aniba rosaeodora Brazilian rosewood neotropical tree nontimber forest products (NTFP) simple sequence repeat (SSR) loci |
url |
http://www.bioone.org/doi/full/10.3732/apps.1200516 |
work_keys_str_mv |
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1725071653288804352 |