Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae)

Premise of the study: Microsatellite loci were isolated and characterized for Brazilian rosewood (<i>Aniba rosaeodora</i>), an endangered neotropical hardwood tree, to investigate population and conservation genetics of this highly valuable nontimber forest resource. Methods and Results...

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Main Authors: Rafael C. Angrizani, Luis A. S. Contim, Maristerra R. Lemes
Format: Article
Language:English
Published: Wiley 2013-09-01
Series:Applications in Plant Sciences
Subjects:
Online Access:http://www.bioone.org/doi/full/10.3732/apps.1200516
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spelling doaj-a71b561ee9c642438aaf02548aae53972020-11-25T01:34:29ZengWileyApplications in Plant Sciences2168-04502013-09-0119120051610.3732/apps.1200516Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae)Rafael C. Angrizani0Luis A. S. Contim1Maristerra R. Lemes2Laboratório de Genética e Biologia Reprodutiva de Plantas (LabGen), Instituto Nacional de Pesquisas da Amazônia (INPA), Avenida André Araújo 2936, 69060-001 Manaus, Amazonas, BrazilLaboratório de Genética, Universidade Federal de Goiás, Campus Jataí, Unidade Jatobá, BR 364, Km 192, Setor Industrial, 75801-615 Jataí, Goiás, BrazilLaboratório de Genética e Biologia Reprodutiva de Plantas (LabGen), Instituto Nacional de Pesquisas da Amazônia (INPA), Avenida André Araújo 2936, 69060-001 Manaus, Amazonas, Brazil; Current address: Instituto de Pesquisas Jardim Botânico do Rio de Janeiro, Rua Pacheco Leão 915, Jardim Botânico, 22460-030 Rio de Janeiro, Rio de Janeiro, BrazilPremise of the study: Microsatellite loci were isolated and characterized for Brazilian rosewood (<i>Aniba rosaeodora</i>), an endangered neotropical hardwood tree, to investigate population and conservation genetics of this highly valuable nontimber forest resource. Methods and Results: We used an enriched genomic library method to isolate and characterize 11 nuclear microsatellite loci for <i>A. rosaeodora</i>, which exhibited an average of 9.6 and 8.7 alleles per locus in two populations from central Amazonia. Mean observed and expected heterozygosities over the 11 loci were 0.604 and 0.687, and 0.807 and 0.828, respectively, in the two populations. Conclusions: The polymorphic microsatellite loci developed for <i>A. rosaeodora</i> showed highly informative content and can be used as a powerful tool in genetic diversity and population structure, gene flow, and mating system studies for conservation purposes.http://www.bioone.org/doi/full/10.3732/apps.1200516AmazoniaAniba rosaeodoraBrazilian rosewoodneotropical treenontimber forest products (NTFP)simple sequence repeat (SSR) loci
collection DOAJ
language English
format Article
sources DOAJ
author Rafael C. Angrizani
Luis A. S. Contim
Maristerra R. Lemes
spellingShingle Rafael C. Angrizani
Luis A. S. Contim
Maristerra R. Lemes
Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae)
Applications in Plant Sciences
Amazonia
Aniba rosaeodora
Brazilian rosewood
neotropical tree
nontimber forest products (NTFP)
simple sequence repeat (SSR) loci
author_facet Rafael C. Angrizani
Luis A. S. Contim
Maristerra R. Lemes
author_sort Rafael C. Angrizani
title Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae)
title_short Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae)
title_full Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae)
title_fullStr Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae)
title_full_unstemmed Development and Characterization of Microsatellite Markers for the Endangered Amazonian Tree <i>Aniba rosaeodora</i> (Lauraceae)
title_sort development and characterization of microsatellite markers for the endangered amazonian tree <i>aniba rosaeodora</i> (lauraceae)
publisher Wiley
series Applications in Plant Sciences
issn 2168-0450
publishDate 2013-09-01
description Premise of the study: Microsatellite loci were isolated and characterized for Brazilian rosewood (<i>Aniba rosaeodora</i>), an endangered neotropical hardwood tree, to investigate population and conservation genetics of this highly valuable nontimber forest resource. Methods and Results: We used an enriched genomic library method to isolate and characterize 11 nuclear microsatellite loci for <i>A. rosaeodora</i>, which exhibited an average of 9.6 and 8.7 alleles per locus in two populations from central Amazonia. Mean observed and expected heterozygosities over the 11 loci were 0.604 and 0.687, and 0.807 and 0.828, respectively, in the two populations. Conclusions: The polymorphic microsatellite loci developed for <i>A. rosaeodora</i> showed highly informative content and can be used as a powerful tool in genetic diversity and population structure, gene flow, and mating system studies for conservation purposes.
topic Amazonia
Aniba rosaeodora
Brazilian rosewood
neotropical tree
nontimber forest products (NTFP)
simple sequence repeat (SSR) loci
url http://www.bioone.org/doi/full/10.3732/apps.1200516
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