Synthetic Biology Platform for Sensing and Integrating Endogenous Transcriptional Inputs in Mammalian Cells

One of the goals of synthetic biology is to develop programmable artificial gene networks that can transduce multiple endogenous molecular cues to precisely control cell behavior. Realizing this vision requires interfacing natural molecular inputs with synthetic components that generate functional m...

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Main Authors: Bartolomeo Angelici, Erik Mailand, Benjamin Haefliger, Yaakov Benenson
Format: Article
Language:English
Published: Elsevier 2016-08-01
Series:Cell Reports
Online Access:http://www.sciencedirect.com/science/article/pii/S2211124716309925
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spelling doaj-a7f2319b21554392866397309dbf26082020-11-24T22:01:24ZengElsevierCell Reports2211-12472016-08-011692525253710.1016/j.celrep.2016.07.061Synthetic Biology Platform for Sensing and Integrating Endogenous Transcriptional Inputs in Mammalian CellsBartolomeo Angelici0Erik Mailand1Benjamin Haefliger2Yaakov Benenson3Department of Biosystems Science and Engineering, Swiss Federal Institute of Technology (ETH Zurich), Mattenstrasse 26, 4058 Basel, SwitzerlandDepartment of Biosystems Science and Engineering, Swiss Federal Institute of Technology (ETH Zurich), Mattenstrasse 26, 4058 Basel, SwitzerlandDepartment of Biosystems Science and Engineering, Swiss Federal Institute of Technology (ETH Zurich), Mattenstrasse 26, 4058 Basel, SwitzerlandDepartment of Biosystems Science and Engineering, Swiss Federal Institute of Technology (ETH Zurich), Mattenstrasse 26, 4058 Basel, SwitzerlandOne of the goals of synthetic biology is to develop programmable artificial gene networks that can transduce multiple endogenous molecular cues to precisely control cell behavior. Realizing this vision requires interfacing natural molecular inputs with synthetic components that generate functional molecular outputs. Interfacing synthetic circuits with endogenous mammalian transcription factors has been particularly difficult. Here, we describe a systematic approach that enables integration and transduction of multiple mammalian transcription factor inputs by a synthetic network. The approach is facilitated by a proportional amplifier sensor based on synergistic positive autoregulation. The circuits efficiently transduce endogenous transcription factor levels into RNAi, transcriptional transactivation, and site-specific recombination. They also enable AND logic between pairs of arbitrary transcription factors. The results establish a framework for developing synthetic gene networks that interface with cellular processes through transcriptional regulators.http://www.sciencedirect.com/science/article/pii/S2211124716309925
collection DOAJ
language English
format Article
sources DOAJ
author Bartolomeo Angelici
Erik Mailand
Benjamin Haefliger
Yaakov Benenson
spellingShingle Bartolomeo Angelici
Erik Mailand
Benjamin Haefliger
Yaakov Benenson
Synthetic Biology Platform for Sensing and Integrating Endogenous Transcriptional Inputs in Mammalian Cells
Cell Reports
author_facet Bartolomeo Angelici
Erik Mailand
Benjamin Haefliger
Yaakov Benenson
author_sort Bartolomeo Angelici
title Synthetic Biology Platform for Sensing and Integrating Endogenous Transcriptional Inputs in Mammalian Cells
title_short Synthetic Biology Platform for Sensing and Integrating Endogenous Transcriptional Inputs in Mammalian Cells
title_full Synthetic Biology Platform for Sensing and Integrating Endogenous Transcriptional Inputs in Mammalian Cells
title_fullStr Synthetic Biology Platform for Sensing and Integrating Endogenous Transcriptional Inputs in Mammalian Cells
title_full_unstemmed Synthetic Biology Platform for Sensing and Integrating Endogenous Transcriptional Inputs in Mammalian Cells
title_sort synthetic biology platform for sensing and integrating endogenous transcriptional inputs in mammalian cells
publisher Elsevier
series Cell Reports
issn 2211-1247
publishDate 2016-08-01
description One of the goals of synthetic biology is to develop programmable artificial gene networks that can transduce multiple endogenous molecular cues to precisely control cell behavior. Realizing this vision requires interfacing natural molecular inputs with synthetic components that generate functional molecular outputs. Interfacing synthetic circuits with endogenous mammalian transcription factors has been particularly difficult. Here, we describe a systematic approach that enables integration and transduction of multiple mammalian transcription factor inputs by a synthetic network. The approach is facilitated by a proportional amplifier sensor based on synergistic positive autoregulation. The circuits efficiently transduce endogenous transcription factor levels into RNAi, transcriptional transactivation, and site-specific recombination. They also enable AND logic between pairs of arbitrary transcription factors. The results establish a framework for developing synthetic gene networks that interface with cellular processes through transcriptional regulators.
url http://www.sciencedirect.com/science/article/pii/S2211124716309925
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AT benjaminhaefliger syntheticbiologyplatformforsensingandintegratingendogenoustranscriptionalinputsinmammaliancells
AT yaakovbenenson syntheticbiologyplatformforsensingandintegratingendogenoustranscriptionalinputsinmammaliancells
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