Phytoplankton Community Composition Determined From Co-variability Among Phytoplankton Pigments From the NAAMES Field Campaign

Analysis of phytoplankton chemotaxonomic markers from high performance liquid chromatography (HPLC) pigment determination is a common approach for evaluating phytoplankton community structure from ocean samples. Here, HPLC phytoplankton pigment concentrations from samples collected underway and from...

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Main Authors: Sasha J. Kramer, David A. Siegel, Jason R. Graff
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-04-01
Series:Frontiers in Marine Science
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fmars.2020.00215/full
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spelling doaj-a804d318fc7d4bcfb5f438f4584e3afb2020-11-25T03:49:39ZengFrontiers Media S.A.Frontiers in Marine Science2296-77452020-04-01710.3389/fmars.2020.00215523642Phytoplankton Community Composition Determined From Co-variability Among Phytoplankton Pigments From the NAAMES Field CampaignSasha J. Kramer0Sasha J. Kramer1David A. Siegel2David A. Siegel3Jason R. Graff4Interdepartmental Graduate Program in Marine Science, University of California, Santa Barbara, Santa Barbara, CA, United StatesEarth Research Institute, University of California, Santa Barbara, Santa Barbara, CA, United StatesEarth Research Institute, University of California, Santa Barbara, Santa Barbara, CA, United StatesDepartment of Geography, University of California, Santa Barbara, Santa Barbara, CA, United StatesDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, OR, United StatesAnalysis of phytoplankton chemotaxonomic markers from high performance liquid chromatography (HPLC) pigment determination is a common approach for evaluating phytoplankton community structure from ocean samples. Here, HPLC phytoplankton pigment concentrations from samples collected underway and from CTD bottle sampling on the North Atlantic Aerosols and Marine Ecosystems Study (NAAMES) are used to assess phytoplankton community composition over a range of seasons and environmental conditions. Several data-driven statistical techniques, including hierarchical clustering, Empirical Orthogonal Function, and network-based community detection analyses, are applied to examine the associations between groups of pigments and infer phytoplankton communities found in the surface ocean during the four NAAMES campaigns. From these analyses, five distinguishable phytoplankton community types emerge based on the associations of phytoplankton pigments: diatom, dinoflagellate, haptophyte, green algae, and cyanobacteria. We use this dataset, along with phytoplankton community structure metrics from flow cytometric analyses, to characterize the distributions of phytoplankton biomarker pigments over the four cruises. The physical and chemical drivers influencing the distribution and co-variability of these five dominant groups of phytoplankton are considered. Finally, the composition of the phytoplankton community across the onset, accumulation, and decline of the annual phytoplankton bloom in a changing North Atlantic Ocean is compared to historical paradigms surrounding seasonal succession.https://www.frontiersin.org/article/10.3389/fmars.2020.00215/fullNorth Atlantic Aerosols and Marine Ecosystems StudyphytoplanktonHPLC pigmentscommunity detectionseasonal succession
collection DOAJ
language English
format Article
sources DOAJ
author Sasha J. Kramer
Sasha J. Kramer
David A. Siegel
David A. Siegel
Jason R. Graff
spellingShingle Sasha J. Kramer
Sasha J. Kramer
David A. Siegel
David A. Siegel
Jason R. Graff
Phytoplankton Community Composition Determined From Co-variability Among Phytoplankton Pigments From the NAAMES Field Campaign
Frontiers in Marine Science
North Atlantic Aerosols and Marine Ecosystems Study
phytoplankton
HPLC pigments
community detection
seasonal succession
author_facet Sasha J. Kramer
Sasha J. Kramer
David A. Siegel
David A. Siegel
Jason R. Graff
author_sort Sasha J. Kramer
title Phytoplankton Community Composition Determined From Co-variability Among Phytoplankton Pigments From the NAAMES Field Campaign
title_short Phytoplankton Community Composition Determined From Co-variability Among Phytoplankton Pigments From the NAAMES Field Campaign
title_full Phytoplankton Community Composition Determined From Co-variability Among Phytoplankton Pigments From the NAAMES Field Campaign
title_fullStr Phytoplankton Community Composition Determined From Co-variability Among Phytoplankton Pigments From the NAAMES Field Campaign
title_full_unstemmed Phytoplankton Community Composition Determined From Co-variability Among Phytoplankton Pigments From the NAAMES Field Campaign
title_sort phytoplankton community composition determined from co-variability among phytoplankton pigments from the naames field campaign
publisher Frontiers Media S.A.
series Frontiers in Marine Science
issn 2296-7745
publishDate 2020-04-01
description Analysis of phytoplankton chemotaxonomic markers from high performance liquid chromatography (HPLC) pigment determination is a common approach for evaluating phytoplankton community structure from ocean samples. Here, HPLC phytoplankton pigment concentrations from samples collected underway and from CTD bottle sampling on the North Atlantic Aerosols and Marine Ecosystems Study (NAAMES) are used to assess phytoplankton community composition over a range of seasons and environmental conditions. Several data-driven statistical techniques, including hierarchical clustering, Empirical Orthogonal Function, and network-based community detection analyses, are applied to examine the associations between groups of pigments and infer phytoplankton communities found in the surface ocean during the four NAAMES campaigns. From these analyses, five distinguishable phytoplankton community types emerge based on the associations of phytoplankton pigments: diatom, dinoflagellate, haptophyte, green algae, and cyanobacteria. We use this dataset, along with phytoplankton community structure metrics from flow cytometric analyses, to characterize the distributions of phytoplankton biomarker pigments over the four cruises. The physical and chemical drivers influencing the distribution and co-variability of these five dominant groups of phytoplankton are considered. Finally, the composition of the phytoplankton community across the onset, accumulation, and decline of the annual phytoplankton bloom in a changing North Atlantic Ocean is compared to historical paradigms surrounding seasonal succession.
topic North Atlantic Aerosols and Marine Ecosystems Study
phytoplankton
HPLC pigments
community detection
seasonal succession
url https://www.frontiersin.org/article/10.3389/fmars.2020.00215/full
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