Comparison of new hyperspectral index and machine learning models for prediction of winter wheat leaf water content

Abstract Background The leaf water content estimation model is established by hyperspectral technology, which is crucial and provides technical reference for precision irrigation. Methods In this study, two consecutive years of field experiments (different irrigation times and seven wheat varieties)...

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Main Authors: Juanjuan Zhang, Wen Zhang, Shuping Xiong, Zhaoxiang Song, Wenzhong Tian, Lei Shi, Xinming Ma
Format: Article
Language:English
Published: BMC 2021-03-01
Series:Plant Methods
Subjects:
Online Access:https://doi.org/10.1186/s13007-021-00737-2
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spelling doaj-a9e9448811dc4799936358a46fd183982021-04-04T11:11:34ZengBMCPlant Methods1746-48112021-03-0117111410.1186/s13007-021-00737-2Comparison of new hyperspectral index and machine learning models for prediction of winter wheat leaf water contentJuanjuan Zhang0Wen Zhang1Shuping Xiong2Zhaoxiang Song3Wenzhong Tian4Lei Shi5Xinming Ma6Collaborative Innovation Center of Henan Grain Crops, Henan Agricultural UniversityCollaborative Innovation Center of Henan Grain Crops, Henan Agricultural UniversityCollaborative Innovation Center of Henan Grain Crops, Henan Agricultural UniversityAdelphi UniversityLuoyang of Agriculture and ForestryCollaborative Innovation Center of Henan Grain Crops, Henan Agricultural UniversityCollaborative Innovation Center of Henan Grain Crops, Henan Agricultural UniversityAbstract Background The leaf water content estimation model is established by hyperspectral technology, which is crucial and provides technical reference for precision irrigation. Methods In this study, two consecutive years of field experiments (different irrigation times and seven wheat varieties) in 2018–2020 were performed to obtain the canopy spectra reflectance and leaf water content (LWC) data. The characteristic bands related to LWC were extracted from correlation coefficient method (CA) and x-Loading weight method (x-Lw). Five modeling methods, spectral index and four other methods (Partial Least-Squares Regression (PLSR), Random Forest Regression (RFR), Extreme Random Trees (ERT), and K-Nearest Neighbor (KNN)) based characteristic bands, were employed to construct LWC estimation models. Results The results showed that the canopy spectral reflectance increased with the increase of irrigation times, especially in the near-infrared band (750–1350 nm). The prediction accuracy of the newly developed differential spectral index DVI (R1185, R1307) was higher than that of the existing spectral index, with R2 of 0.85 and R2 of 0.78 for the calibration and validation, respectively. Due to a large amount of hyperspectral data, the correlation coefficient method (CA) and x-Loading weight (x-Lw) were used to select the water characteristic bands (100 and 28 characteristic bands, respectively) from the full spectrum. We found that the accuracy of the model based on the characteristic bands was not significantly lower than that of the full spectrum-based models. Among these models, the ERT- x-Lw model performed the best (R2 and RMSE of 0.88 and 1.46; 0.84 and 1.62 for the calibration and validation, respectively). In addition, the accuracy of the LWC estimation model constructed by ERT-x-Lw was higher than that of DVI (R1185, R1307). Conclusion The two models based on ERT-x-Lw and DVI (R1185, R1307) can effectively predict wheat leaf water content. The results provide a technical reference and a basis for crop water monitoring and diagnosis under similar production conditions.https://doi.org/10.1186/s13007-021-00737-2Winter wheatLeaf water contentSpectral indexCharacteristic bandModeling methodInversion model
collection DOAJ
language English
format Article
sources DOAJ
author Juanjuan Zhang
Wen Zhang
Shuping Xiong
Zhaoxiang Song
Wenzhong Tian
Lei Shi
Xinming Ma
spellingShingle Juanjuan Zhang
Wen Zhang
Shuping Xiong
Zhaoxiang Song
Wenzhong Tian
Lei Shi
Xinming Ma
Comparison of new hyperspectral index and machine learning models for prediction of winter wheat leaf water content
Plant Methods
Winter wheat
Leaf water content
Spectral index
Characteristic band
Modeling method
Inversion model
author_facet Juanjuan Zhang
Wen Zhang
Shuping Xiong
Zhaoxiang Song
Wenzhong Tian
Lei Shi
Xinming Ma
author_sort Juanjuan Zhang
title Comparison of new hyperspectral index and machine learning models for prediction of winter wheat leaf water content
title_short Comparison of new hyperspectral index and machine learning models for prediction of winter wheat leaf water content
title_full Comparison of new hyperspectral index and machine learning models for prediction of winter wheat leaf water content
title_fullStr Comparison of new hyperspectral index and machine learning models for prediction of winter wheat leaf water content
title_full_unstemmed Comparison of new hyperspectral index and machine learning models for prediction of winter wheat leaf water content
title_sort comparison of new hyperspectral index and machine learning models for prediction of winter wheat leaf water content
publisher BMC
series Plant Methods
issn 1746-4811
publishDate 2021-03-01
description Abstract Background The leaf water content estimation model is established by hyperspectral technology, which is crucial and provides technical reference for precision irrigation. Methods In this study, two consecutive years of field experiments (different irrigation times and seven wheat varieties) in 2018–2020 were performed to obtain the canopy spectra reflectance and leaf water content (LWC) data. The characteristic bands related to LWC were extracted from correlation coefficient method (CA) and x-Loading weight method (x-Lw). Five modeling methods, spectral index and four other methods (Partial Least-Squares Regression (PLSR), Random Forest Regression (RFR), Extreme Random Trees (ERT), and K-Nearest Neighbor (KNN)) based characteristic bands, were employed to construct LWC estimation models. Results The results showed that the canopy spectral reflectance increased with the increase of irrigation times, especially in the near-infrared band (750–1350 nm). The prediction accuracy of the newly developed differential spectral index DVI (R1185, R1307) was higher than that of the existing spectral index, with R2 of 0.85 and R2 of 0.78 for the calibration and validation, respectively. Due to a large amount of hyperspectral data, the correlation coefficient method (CA) and x-Loading weight (x-Lw) were used to select the water characteristic bands (100 and 28 characteristic bands, respectively) from the full spectrum. We found that the accuracy of the model based on the characteristic bands was not significantly lower than that of the full spectrum-based models. Among these models, the ERT- x-Lw model performed the best (R2 and RMSE of 0.88 and 1.46; 0.84 and 1.62 for the calibration and validation, respectively). In addition, the accuracy of the LWC estimation model constructed by ERT-x-Lw was higher than that of DVI (R1185, R1307). Conclusion The two models based on ERT-x-Lw and DVI (R1185, R1307) can effectively predict wheat leaf water content. The results provide a technical reference and a basis for crop water monitoring and diagnosis under similar production conditions.
topic Winter wheat
Leaf water content
Spectral index
Characteristic band
Modeling method
Inversion model
url https://doi.org/10.1186/s13007-021-00737-2
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