Multidrug resistance-associated protein 4 is a bile transporter of Clonorchis sinensis simulated by in silico docking
Abstract Background Multidrug resistance-associated protein 4 (MRP4) is a member of the C subfamily of the ABC family of ATP-binding cassette (ABC) transporters. MRP4 regulates ATP-dependent efflux of various organic anionic substrates and bile acids out of cells. Since Clonorchis sinensis lives in...
Main Authors: | , , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2017-11-01
|
Series: | Parasites & Vectors |
Subjects: | |
Online Access: | http://link.springer.com/article/10.1186/s13071-017-2523-8 |
id |
doaj-aa7549b4192e48008d8f833e99d2fdf1 |
---|---|
record_format |
Article |
spelling |
doaj-aa7549b4192e48008d8f833e99d2fdf12020-11-24T23:55:58ZengBMCParasites & Vectors1756-33052017-11-0110111110.1186/s13071-017-2523-8Multidrug resistance-associated protein 4 is a bile transporter of Clonorchis sinensis simulated by in silico dockingFuhong Dai0Won Gi Yoo1Ji-Yun Lee2Yanyan Lu3Jhang Ho Pak4Woon-Mok Sohn5Sung-Jong Hong6Department of Medical Environmental Biology, Chung-Ang University College of MedicineDepartment of Medical Environmental Biology, Chung-Ang University College of MedicineDepartment of Medical Environmental Biology, Chung-Ang University College of MedicineDepartment of Medical Environmental Biology, Chung-Ang University College of MedicineDepartment of Convergence Medicine, University of Ulsan College of Medicine and Asan Institute for Life Sciences, Asan Medical CenterDepartment of Parasitology and Institute of Health Sciences, Gyeongsang National University School of MedicineDepartment of Medical Environmental Biology, Chung-Ang University College of MedicineAbstract Background Multidrug resistance-associated protein 4 (MRP4) is a member of the C subfamily of the ABC family of ATP-binding cassette (ABC) transporters. MRP4 regulates ATP-dependent efflux of various organic anionic substrates and bile acids out of cells. Since Clonorchis sinensis lives in host’s bile duct, accumulation of bile juice can be toxic to the worm’s tissues and cells. Therefore, C. sinensis needs bile transporters to reduce accumulation of bile acids within its body. Results We cloned MRP4 (CsMRP4) from C. sinensis and obtained a cDNA encoding an open reading frame of 1469 amino acids. Phylogenetic analysis revealed that CsMRP4 belonged to the MRP/SUR/CFTR subfamily. A tertiary structure of CsMRP4 was generated by homology modeling based on multiple structures of MRP1 and P-glycoprotein. CsMRP4 had two membrane-spanning domains (MSD1 & 2) and two nucleotide-binding domains (NBD1 & 2) as common structural folds. Docking simulation with nine bile acids showed that CsMRP4 transports bile acids through the inner cavity. Moreover, it was found that CsMRP4 mRNA was more abundant in the metacercariae than in the adults. Mouse immune serum, generated against the CsMRP4-NBD1 (24.9 kDa) fragment, localized CsMRP4 mainly in mesenchymal tissues and oral and ventral suckers of the metacercariae and the adults. Conclusions Our findings shed new light on MRPs and their homologs and provide a platform for further structural and functional investigations on the bile transporters and parasites’ survival.http://link.springer.com/article/10.1186/s13071-017-2523-8Clonorchis sinensisBile transporterMRP4ABCC4StructureLocalization |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Fuhong Dai Won Gi Yoo Ji-Yun Lee Yanyan Lu Jhang Ho Pak Woon-Mok Sohn Sung-Jong Hong |
spellingShingle |
Fuhong Dai Won Gi Yoo Ji-Yun Lee Yanyan Lu Jhang Ho Pak Woon-Mok Sohn Sung-Jong Hong Multidrug resistance-associated protein 4 is a bile transporter of Clonorchis sinensis simulated by in silico docking Parasites & Vectors Clonorchis sinensis Bile transporter MRP4 ABCC4 Structure Localization |
author_facet |
Fuhong Dai Won Gi Yoo Ji-Yun Lee Yanyan Lu Jhang Ho Pak Woon-Mok Sohn Sung-Jong Hong |
author_sort |
Fuhong Dai |
title |
Multidrug resistance-associated protein 4 is a bile transporter of Clonorchis sinensis simulated by in silico docking |
title_short |
Multidrug resistance-associated protein 4 is a bile transporter of Clonorchis sinensis simulated by in silico docking |
title_full |
Multidrug resistance-associated protein 4 is a bile transporter of Clonorchis sinensis simulated by in silico docking |
title_fullStr |
Multidrug resistance-associated protein 4 is a bile transporter of Clonorchis sinensis simulated by in silico docking |
title_full_unstemmed |
Multidrug resistance-associated protein 4 is a bile transporter of Clonorchis sinensis simulated by in silico docking |
title_sort |
multidrug resistance-associated protein 4 is a bile transporter of clonorchis sinensis simulated by in silico docking |
publisher |
BMC |
series |
Parasites & Vectors |
issn |
1756-3305 |
publishDate |
2017-11-01 |
description |
Abstract Background Multidrug resistance-associated protein 4 (MRP4) is a member of the C subfamily of the ABC family of ATP-binding cassette (ABC) transporters. MRP4 regulates ATP-dependent efflux of various organic anionic substrates and bile acids out of cells. Since Clonorchis sinensis lives in host’s bile duct, accumulation of bile juice can be toxic to the worm’s tissues and cells. Therefore, C. sinensis needs bile transporters to reduce accumulation of bile acids within its body. Results We cloned MRP4 (CsMRP4) from C. sinensis and obtained a cDNA encoding an open reading frame of 1469 amino acids. Phylogenetic analysis revealed that CsMRP4 belonged to the MRP/SUR/CFTR subfamily. A tertiary structure of CsMRP4 was generated by homology modeling based on multiple structures of MRP1 and P-glycoprotein. CsMRP4 had two membrane-spanning domains (MSD1 & 2) and two nucleotide-binding domains (NBD1 & 2) as common structural folds. Docking simulation with nine bile acids showed that CsMRP4 transports bile acids through the inner cavity. Moreover, it was found that CsMRP4 mRNA was more abundant in the metacercariae than in the adults. Mouse immune serum, generated against the CsMRP4-NBD1 (24.9 kDa) fragment, localized CsMRP4 mainly in mesenchymal tissues and oral and ventral suckers of the metacercariae and the adults. Conclusions Our findings shed new light on MRPs and their homologs and provide a platform for further structural and functional investigations on the bile transporters and parasites’ survival. |
topic |
Clonorchis sinensis Bile transporter MRP4 ABCC4 Structure Localization |
url |
http://link.springer.com/article/10.1186/s13071-017-2523-8 |
work_keys_str_mv |
AT fuhongdai multidrugresistanceassociatedprotein4isabiletransporterofclonorchissinensissimulatedbyinsilicodocking AT wongiyoo multidrugresistanceassociatedprotein4isabiletransporterofclonorchissinensissimulatedbyinsilicodocking AT jiyunlee multidrugresistanceassociatedprotein4isabiletransporterofclonorchissinensissimulatedbyinsilicodocking AT yanyanlu multidrugresistanceassociatedprotein4isabiletransporterofclonorchissinensissimulatedbyinsilicodocking AT jhanghopak multidrugresistanceassociatedprotein4isabiletransporterofclonorchissinensissimulatedbyinsilicodocking AT woonmoksohn multidrugresistanceassociatedprotein4isabiletransporterofclonorchissinensissimulatedbyinsilicodocking AT sungjonghong multidrugresistanceassociatedprotein4isabiletransporterofclonorchissinensissimulatedbyinsilicodocking |
_version_ |
1725460381886840832 |