Three Distinct Patterns of Histone H3Y41 Phosphorylation Mark Active Genes

The JAK2 tyrosine kinase is a critical mediator of cytokine-induced signaling. It plays a role in the nucleus, where it regulates transcription by phosphorylating histone H3 at tyrosine 41 (H3Y41ph). We used chromatin immunoprecipitation coupled to massively parallel DNA sequencing (ChIP-seq) to de...

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Main Authors: Mark A. Dawson, Samuel D. Foster, Andrew J. Bannister, Samuel C. Robson, Rebecca Hannah, Xiaonan Wang, Blerta Xhemalce, Andrew D. Wood, Anthony R. Green, Berthold Göttgens, Tony Kouzarides
Format: Article
Language:English
Published: Elsevier 2012-09-01
Series:Cell Reports
Online Access:http://www.sciencedirect.com/science/article/pii/S2211124712002410
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spelling doaj-ab41808cb7824feba4f92a5c2bea78b22020-11-24T21:11:50ZengElsevierCell Reports2211-12472012-09-012347047710.1016/j.celrep.2012.08.016Three Distinct Patterns of Histone H3Y41 Phosphorylation Mark Active GenesMark A. Dawson0Samuel D. Foster1Andrew J. Bannister2Samuel C. Robson3Rebecca Hannah4Xiaonan Wang5Blerta Xhemalce6Andrew D. Wood7Anthony R. Green8Berthold Göttgens9Tony Kouzarides10Gurdon Institute and Department of Pathology, Tennis Court Road, Cambridge, CB2 1QN, UKDepartment of Haematology, Cambridge Institute for Medical Research and The Wellcome Trust and MRC Stem Cell Institute, University of Cambridge, Cambridge, CB2 0XY, UKGurdon Institute and Department of Pathology, Tennis Court Road, Cambridge, CB2 1QN, UKGurdon Institute and Department of Pathology, Tennis Court Road, Cambridge, CB2 1QN, UKDepartment of Haematology, Cambridge Institute for Medical Research and The Wellcome Trust and MRC Stem Cell Institute, University of Cambridge, Cambridge, CB2 0XY, UKDepartment of Haematology, Cambridge Institute for Medical Research and The Wellcome Trust and MRC Stem Cell Institute, University of Cambridge, Cambridge, CB2 0XY, UKGurdon Institute and Department of Pathology, Tennis Court Road, Cambridge, CB2 1QN, UKDepartment of Haematology, Cambridge Institute for Medical Research and The Wellcome Trust and MRC Stem Cell Institute, University of Cambridge, Cambridge, CB2 0XY, UKDepartment of Haematology, Cambridge Institute for Medical Research and The Wellcome Trust and MRC Stem Cell Institute, University of Cambridge, Cambridge, CB2 0XY, UKDepartment of Haematology, Cambridge Institute for Medical Research and The Wellcome Trust and MRC Stem Cell Institute, University of Cambridge, Cambridge, CB2 0XY, UKGurdon Institute and Department of Pathology, Tennis Court Road, Cambridge, CB2 1QN, UK The JAK2 tyrosine kinase is a critical mediator of cytokine-induced signaling. It plays a role in the nucleus, where it regulates transcription by phosphorylating histone H3 at tyrosine 41 (H3Y41ph). We used chromatin immunoprecipitation coupled to massively parallel DNA sequencing (ChIP-seq) to define the genome-wide pattern of H3Y41ph in human erythroid leukemia cells. Our results indicate that H3Y41ph is located at three distinct sites: (1) at a subset of active promoters, where it overlaps with H3K4me3, (2) at distal cis-regulatory elements, where it coincides with the binding of STAT5, and (3) throughout the transcribed regions of active, tissue-specific hematopoietic genes. Together, these data extend our understanding of this conserved and essential signaling pathway and provide insight into the mechanisms by which extracellular stimuli may lead to the coordinated regulation of transcription. http://www.sciencedirect.com/science/article/pii/S2211124712002410
collection DOAJ
language English
format Article
sources DOAJ
author Mark A. Dawson
Samuel D. Foster
Andrew J. Bannister
Samuel C. Robson
Rebecca Hannah
Xiaonan Wang
Blerta Xhemalce
Andrew D. Wood
Anthony R. Green
Berthold Göttgens
Tony Kouzarides
spellingShingle Mark A. Dawson
Samuel D. Foster
Andrew J. Bannister
Samuel C. Robson
Rebecca Hannah
Xiaonan Wang
Blerta Xhemalce
Andrew D. Wood
Anthony R. Green
Berthold Göttgens
Tony Kouzarides
Three Distinct Patterns of Histone H3Y41 Phosphorylation Mark Active Genes
Cell Reports
author_facet Mark A. Dawson
Samuel D. Foster
Andrew J. Bannister
Samuel C. Robson
Rebecca Hannah
Xiaonan Wang
Blerta Xhemalce
Andrew D. Wood
Anthony R. Green
Berthold Göttgens
Tony Kouzarides
author_sort Mark A. Dawson
title Three Distinct Patterns of Histone H3Y41 Phosphorylation Mark Active Genes
title_short Three Distinct Patterns of Histone H3Y41 Phosphorylation Mark Active Genes
title_full Three Distinct Patterns of Histone H3Y41 Phosphorylation Mark Active Genes
title_fullStr Three Distinct Patterns of Histone H3Y41 Phosphorylation Mark Active Genes
title_full_unstemmed Three Distinct Patterns of Histone H3Y41 Phosphorylation Mark Active Genes
title_sort three distinct patterns of histone h3y41 phosphorylation mark active genes
publisher Elsevier
series Cell Reports
issn 2211-1247
publishDate 2012-09-01
description The JAK2 tyrosine kinase is a critical mediator of cytokine-induced signaling. It plays a role in the nucleus, where it regulates transcription by phosphorylating histone H3 at tyrosine 41 (H3Y41ph). We used chromatin immunoprecipitation coupled to massively parallel DNA sequencing (ChIP-seq) to define the genome-wide pattern of H3Y41ph in human erythroid leukemia cells. Our results indicate that H3Y41ph is located at three distinct sites: (1) at a subset of active promoters, where it overlaps with H3K4me3, (2) at distal cis-regulatory elements, where it coincides with the binding of STAT5, and (3) throughout the transcribed regions of active, tissue-specific hematopoietic genes. Together, these data extend our understanding of this conserved and essential signaling pathway and provide insight into the mechanisms by which extracellular stimuli may lead to the coordinated regulation of transcription.
url http://www.sciencedirect.com/science/article/pii/S2211124712002410
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