Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches

The genus Laccaria (Hydnangiaceae, Agaricales) plays an important role in forest ecosystems as an ectomycorrhizal fungus, contributing to nutrient cycles through symbiosis with many types of trees. Though understanding Laccaria diversity and distribution patterns, as well as its association with hos...

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Main Authors: Hae Jin Cho, Ki Hyeong Park, Myung Soo Park, Yoonhee Cho, Ji Seon Kim, Chang Wan Seo, Seung-Yoon Oh, Young Woon Lim
Format: Article
Language:English
Published: Taylor & Francis Group 2021-07-01
Series:Mycobiology
Subjects:
ngs
Online Access:http://dx.doi.org/10.1080/12298093.2021.1940747
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spelling doaj-ab696336fecf48bc9a8368ad7a492d392021-07-15T13:10:30ZengTaylor & Francis GroupMycobiology1229-80932092-93232021-07-01001810.1080/12298093.2021.19407471940747Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four ApproachesHae Jin Cho0Ki Hyeong Park1Myung Soo Park2Yoonhee Cho3Ji Seon Kim4Chang Wan Seo5Seung-Yoon Oh6Young Woon Lim7School of Biological Sciences and Institute of Microbiology, Seoul National UniversitySchool of Biological Sciences and Institute of Microbiology, Seoul National UniversitySchool of Biological Sciences and Institute of Microbiology, Seoul National UniversitySchool of Biological Sciences and Institute of Microbiology, Seoul National UniversitySchool of Biological Sciences and Institute of Microbiology, Seoul National UniversitySchool of Biological Sciences and Institute of Microbiology, Seoul National UniversityDepartment of Biology and Chemistry, Changwon National UniversitySchool of Biological Sciences and Institute of Microbiology, Seoul National UniversityThe genus Laccaria (Hydnangiaceae, Agaricales) plays an important role in forest ecosystems as an ectomycorrhizal fungus, contributing to nutrient cycles through symbiosis with many types of trees. Though understanding Laccaria diversity and distribution patterns, as well as its association with host plants, is fundamental to constructing a balanced plant diversity and conducting effective forest management, previous studies have not been effective in accurately investigating, as they relied heavily on specimen collection alone. To investigate the true diversity and distribution pattern of Laccaria species and determine their host types, we used four different approaches: specimen-based analysis, open database search (ODS), NGS analysis, and species-specific PCR (SSP). As a result, 14 Laccaria species have been confirmed in Korea. Results regarding the species distribution pattern were different between specimen-based analysis and SSP. However, when both were integrated, the exact distribution pattern of each Laccaria species was determined. In addition, the SSP revealed that many Laccaria species have a wide range of host types. This study shows that using these four different approaches is useful in determining the diversity, distribution, and host of ECM fungi. Furthermore, results obtained for Laccaria will serve as a baseline to help understand the role of ECM fungi in forest management in response to climate change.http://dx.doi.org/10.1080/12298093.2021.1940747ectomycorrhizal fungingspinus densifloraquercus mongolicaspecies-specific primer
collection DOAJ
language English
format Article
sources DOAJ
author Hae Jin Cho
Ki Hyeong Park
Myung Soo Park
Yoonhee Cho
Ji Seon Kim
Chang Wan Seo
Seung-Yoon Oh
Young Woon Lim
spellingShingle Hae Jin Cho
Ki Hyeong Park
Myung Soo Park
Yoonhee Cho
Ji Seon Kim
Chang Wan Seo
Seung-Yoon Oh
Young Woon Lim
Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches
Mycobiology
ectomycorrhizal fungi
ngs
pinus densiflora
quercus mongolica
species-specific primer
author_facet Hae Jin Cho
Ki Hyeong Park
Myung Soo Park
Yoonhee Cho
Ji Seon Kim
Chang Wan Seo
Seung-Yoon Oh
Young Woon Lim
author_sort Hae Jin Cho
title Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches
title_short Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches
title_full Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches
title_fullStr Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches
title_full_unstemmed Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches
title_sort determination of diversity, distribution and host specificity of korean laccaria using four approaches
publisher Taylor & Francis Group
series Mycobiology
issn 1229-8093
2092-9323
publishDate 2021-07-01
description The genus Laccaria (Hydnangiaceae, Agaricales) plays an important role in forest ecosystems as an ectomycorrhizal fungus, contributing to nutrient cycles through symbiosis with many types of trees. Though understanding Laccaria diversity and distribution patterns, as well as its association with host plants, is fundamental to constructing a balanced plant diversity and conducting effective forest management, previous studies have not been effective in accurately investigating, as they relied heavily on specimen collection alone. To investigate the true diversity and distribution pattern of Laccaria species and determine their host types, we used four different approaches: specimen-based analysis, open database search (ODS), NGS analysis, and species-specific PCR (SSP). As a result, 14 Laccaria species have been confirmed in Korea. Results regarding the species distribution pattern were different between specimen-based analysis and SSP. However, when both were integrated, the exact distribution pattern of each Laccaria species was determined. In addition, the SSP revealed that many Laccaria species have a wide range of host types. This study shows that using these four different approaches is useful in determining the diversity, distribution, and host of ECM fungi. Furthermore, results obtained for Laccaria will serve as a baseline to help understand the role of ECM fungi in forest management in response to climate change.
topic ectomycorrhizal fungi
ngs
pinus densiflora
quercus mongolica
species-specific primer
url http://dx.doi.org/10.1080/12298093.2021.1940747
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