Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches
The genus Laccaria (Hydnangiaceae, Agaricales) plays an important role in forest ecosystems as an ectomycorrhizal fungus, contributing to nutrient cycles through symbiosis with many types of trees. Though understanding Laccaria diversity and distribution patterns, as well as its association with hos...
Main Authors: | , , , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Taylor & Francis Group
2021-07-01
|
Series: | Mycobiology |
Subjects: | |
Online Access: | http://dx.doi.org/10.1080/12298093.2021.1940747 |
id |
doaj-ab696336fecf48bc9a8368ad7a492d39 |
---|---|
record_format |
Article |
spelling |
doaj-ab696336fecf48bc9a8368ad7a492d392021-07-15T13:10:30ZengTaylor & Francis GroupMycobiology1229-80932092-93232021-07-01001810.1080/12298093.2021.19407471940747Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four ApproachesHae Jin Cho0Ki Hyeong Park1Myung Soo Park2Yoonhee Cho3Ji Seon Kim4Chang Wan Seo5Seung-Yoon Oh6Young Woon Lim7School of Biological Sciences and Institute of Microbiology, Seoul National UniversitySchool of Biological Sciences and Institute of Microbiology, Seoul National UniversitySchool of Biological Sciences and Institute of Microbiology, Seoul National UniversitySchool of Biological Sciences and Institute of Microbiology, Seoul National UniversitySchool of Biological Sciences and Institute of Microbiology, Seoul National UniversitySchool of Biological Sciences and Institute of Microbiology, Seoul National UniversityDepartment of Biology and Chemistry, Changwon National UniversitySchool of Biological Sciences and Institute of Microbiology, Seoul National UniversityThe genus Laccaria (Hydnangiaceae, Agaricales) plays an important role in forest ecosystems as an ectomycorrhizal fungus, contributing to nutrient cycles through symbiosis with many types of trees. Though understanding Laccaria diversity and distribution patterns, as well as its association with host plants, is fundamental to constructing a balanced plant diversity and conducting effective forest management, previous studies have not been effective in accurately investigating, as they relied heavily on specimen collection alone. To investigate the true diversity and distribution pattern of Laccaria species and determine their host types, we used four different approaches: specimen-based analysis, open database search (ODS), NGS analysis, and species-specific PCR (SSP). As a result, 14 Laccaria species have been confirmed in Korea. Results regarding the species distribution pattern were different between specimen-based analysis and SSP. However, when both were integrated, the exact distribution pattern of each Laccaria species was determined. In addition, the SSP revealed that many Laccaria species have a wide range of host types. This study shows that using these four different approaches is useful in determining the diversity, distribution, and host of ECM fungi. Furthermore, results obtained for Laccaria will serve as a baseline to help understand the role of ECM fungi in forest management in response to climate change.http://dx.doi.org/10.1080/12298093.2021.1940747ectomycorrhizal fungingspinus densifloraquercus mongolicaspecies-specific primer |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Hae Jin Cho Ki Hyeong Park Myung Soo Park Yoonhee Cho Ji Seon Kim Chang Wan Seo Seung-Yoon Oh Young Woon Lim |
spellingShingle |
Hae Jin Cho Ki Hyeong Park Myung Soo Park Yoonhee Cho Ji Seon Kim Chang Wan Seo Seung-Yoon Oh Young Woon Lim Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches Mycobiology ectomycorrhizal fungi ngs pinus densiflora quercus mongolica species-specific primer |
author_facet |
Hae Jin Cho Ki Hyeong Park Myung Soo Park Yoonhee Cho Ji Seon Kim Chang Wan Seo Seung-Yoon Oh Young Woon Lim |
author_sort |
Hae Jin Cho |
title |
Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches |
title_short |
Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches |
title_full |
Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches |
title_fullStr |
Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches |
title_full_unstemmed |
Determination of Diversity, Distribution and Host Specificity of Korean Laccaria Using Four Approaches |
title_sort |
determination of diversity, distribution and host specificity of korean laccaria using four approaches |
publisher |
Taylor & Francis Group |
series |
Mycobiology |
issn |
1229-8093 2092-9323 |
publishDate |
2021-07-01 |
description |
The genus Laccaria (Hydnangiaceae, Agaricales) plays an important role in forest ecosystems as an ectomycorrhizal fungus, contributing to nutrient cycles through symbiosis with many types of trees. Though understanding Laccaria diversity and distribution patterns, as well as its association with host plants, is fundamental to constructing a balanced plant diversity and conducting effective forest management, previous studies have not been effective in accurately investigating, as they relied heavily on specimen collection alone. To investigate the true diversity and distribution pattern of Laccaria species and determine their host types, we used four different approaches: specimen-based analysis, open database search (ODS), NGS analysis, and species-specific PCR (SSP). As a result, 14 Laccaria species have been confirmed in Korea. Results regarding the species distribution pattern were different between specimen-based analysis and SSP. However, when both were integrated, the exact distribution pattern of each Laccaria species was determined. In addition, the SSP revealed that many Laccaria species have a wide range of host types. This study shows that using these four different approaches is useful in determining the diversity, distribution, and host of ECM fungi. Furthermore, results obtained for Laccaria will serve as a baseline to help understand the role of ECM fungi in forest management in response to climate change. |
topic |
ectomycorrhizal fungi ngs pinus densiflora quercus mongolica species-specific primer |
url |
http://dx.doi.org/10.1080/12298093.2021.1940747 |
work_keys_str_mv |
AT haejincho determinationofdiversitydistributionandhostspecificityofkoreanlaccariausingfourapproaches AT kihyeongpark determinationofdiversitydistributionandhostspecificityofkoreanlaccariausingfourapproaches AT myungsoopark determinationofdiversitydistributionandhostspecificityofkoreanlaccariausingfourapproaches AT yoonheecho determinationofdiversitydistributionandhostspecificityofkoreanlaccariausingfourapproaches AT jiseonkim determinationofdiversitydistributionandhostspecificityofkoreanlaccariausingfourapproaches AT changwanseo determinationofdiversitydistributionandhostspecificityofkoreanlaccariausingfourapproaches AT seungyoonoh determinationofdiversitydistributionandhostspecificityofkoreanlaccariausingfourapproaches AT youngwoonlim determinationofdiversitydistributionandhostspecificityofkoreanlaccariausingfourapproaches |
_version_ |
1721300958610194432 |