Genome Analysis of the Marine Bacterium <i>Labrenzia</i> sp. Strain 011, a Potential Protective Agent of Mollusks
The marine bacterium <i>Labrenzia</i> sp. strain 011 was isolated from the coastal sediment of Kronsgaard, Germany. The <i>Labrenzia</i> species are suggested to be protective agents of mollusks. <i>Labrenzia</i> sp. strain 011 produces specialized metabolites, wh...
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doaj-ae1fbeeacc3a417eb48d55accc71b7f02020-11-25T00:02:55ZengMDPI AGData2306-57292019-02-01413310.3390/data4010033data4010033Genome Analysis of the Marine Bacterium <i>Labrenzia</i> sp. Strain 011, a Potential Protective Agent of MollusksJamshid Amiri Moghaddam0Antonio Dávila-Céspedes1Mohammad Alanjary2Jochen Blom3Gabriele M. König4Till F. Schäberle5Institute for Pharmaceutical Biology, University of Bonn, 53115 Bonn, GermanyInstitute for Pharmaceutical Biology, University of Bonn, 53115 Bonn, GermanyBioinformatics Group, Wageningen University, 6708PB Wageningen, The NetherlandsBioinformatics and Systems Biology, Justus-Liebig-University Giessen, 35390 Giessen, GermanyInstitute for Pharmaceutical Biology, University of Bonn, 53115 Bonn, GermanyGerman Center for Infection Research (DZIF), Partner Site Cologne/Bonn, 50935 Cologne, GermanyThe marine bacterium <i>Labrenzia</i> sp. strain 011 was isolated from the coastal sediment of Kronsgaard, Germany. The <i>Labrenzia</i> species are suggested to be protective agents of mollusks. <i>Labrenzia</i> sp. strain 011 produces specialized metabolites, which showed activity against a range of microorganisms, thereunder strong inhibitory effects against <i>Pseudoroseovarius crassostreae</i> DSM 16,950 (genus <i>Roseovarius</i>), the causative agent of oyster disease. The genome of <i>Labrenzia</i> sp. strain 011 was sequenced and assembled into 65 contigs, has a size of 5.1 Mbp, and a G+C content of 61.6%. A comparative genome analysis defined <i>Labrenzia</i> sp. strain 011 as a distinct new species within the genus <i>Labrenzia</i>, whereby 44% of the genome was contributed to the <i>Labrenzia</i> core genome. The genomic data provided here is expected to contribute to a deeper understanding of the mollusk-protective role of <i>Labrenzia</i> spp.https://www.mdpi.com/2306-5729/4/1/33<i>Labrenzia</i>draft genomecomparative genomicsantimicrobialoyster disease<i>Roseovarius crassostreae</i> |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Jamshid Amiri Moghaddam Antonio Dávila-Céspedes Mohammad Alanjary Jochen Blom Gabriele M. König Till F. Schäberle |
spellingShingle |
Jamshid Amiri Moghaddam Antonio Dávila-Céspedes Mohammad Alanjary Jochen Blom Gabriele M. König Till F. Schäberle Genome Analysis of the Marine Bacterium <i>Labrenzia</i> sp. Strain 011, a Potential Protective Agent of Mollusks Data <i>Labrenzia</i> draft genome comparative genomics antimicrobial oyster disease <i>Roseovarius crassostreae</i> |
author_facet |
Jamshid Amiri Moghaddam Antonio Dávila-Céspedes Mohammad Alanjary Jochen Blom Gabriele M. König Till F. Schäberle |
author_sort |
Jamshid Amiri Moghaddam |
title |
Genome Analysis of the Marine Bacterium <i>Labrenzia</i> sp. Strain 011, a Potential Protective Agent of Mollusks |
title_short |
Genome Analysis of the Marine Bacterium <i>Labrenzia</i> sp. Strain 011, a Potential Protective Agent of Mollusks |
title_full |
Genome Analysis of the Marine Bacterium <i>Labrenzia</i> sp. Strain 011, a Potential Protective Agent of Mollusks |
title_fullStr |
Genome Analysis of the Marine Bacterium <i>Labrenzia</i> sp. Strain 011, a Potential Protective Agent of Mollusks |
title_full_unstemmed |
Genome Analysis of the Marine Bacterium <i>Labrenzia</i> sp. Strain 011, a Potential Protective Agent of Mollusks |
title_sort |
genome analysis of the marine bacterium <i>labrenzia</i> sp. strain 011, a potential protective agent of mollusks |
publisher |
MDPI AG |
series |
Data |
issn |
2306-5729 |
publishDate |
2019-02-01 |
description |
The marine bacterium <i>Labrenzia</i> sp. strain 011 was isolated from the coastal sediment of Kronsgaard, Germany. The <i>Labrenzia</i> species are suggested to be protective agents of mollusks. <i>Labrenzia</i> sp. strain 011 produces specialized metabolites, which showed activity against a range of microorganisms, thereunder strong inhibitory effects against <i>Pseudoroseovarius crassostreae</i> DSM 16,950 (genus <i>Roseovarius</i>), the causative agent of oyster disease. The genome of <i>Labrenzia</i> sp. strain 011 was sequenced and assembled into 65 contigs, has a size of 5.1 Mbp, and a G+C content of 61.6%. A comparative genome analysis defined <i>Labrenzia</i> sp. strain 011 as a distinct new species within the genus <i>Labrenzia</i>, whereby 44% of the genome was contributed to the <i>Labrenzia</i> core genome. The genomic data provided here is expected to contribute to a deeper understanding of the mollusk-protective role of <i>Labrenzia</i> spp. |
topic |
<i>Labrenzia</i> draft genome comparative genomics antimicrobial oyster disease <i>Roseovarius crassostreae</i> |
url |
https://www.mdpi.com/2306-5729/4/1/33 |
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