Frequency of serine protease autotransporters of Enterobacteriaceae (SPATE) encoding genes in diffusely adherent Escherichia coli (DAEC) isolates from children with and without diarrhea

The aim of the study was to determine the frequency of six genes encoding serine protease autotransporter proteins Enterobacteriaceae (SPATE) in diffusely adherent Escherichia coli (DAEC) isolates from children with (WD, n=63) and without diarrhea (WOD, n=41) from Lima, Peru. WOD were considered a c...

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Main Authors: Karen Ocampo, Maribel Riveros, Maria Pinedo-Bardales, Joaquim Ruiz, Theresa J. Ochoa
Format: Article
Language:Spanish
Published: Instituto Nacional de Salud 2021-03-01
Series:Revista Peruana de Medicina Experimental y Salud Pública
Subjects:
Online Access:https://rpmesp.ins.gob.pe/index.php/rpmesp/article/view/5750
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spelling doaj-af30d1b2adc549b6a27872cf6b62a8142021-05-11T21:46:26ZspaInstituto Nacional de SaludRevista Peruana de Medicina Experimental y Salud Pública1726-46341726-46422021-03-01381124910.17843/rpmesp.2021.381.57502478Frequency of serine protease autotransporters of Enterobacteriaceae (SPATE) encoding genes in diffusely adherent Escherichia coli (DAEC) isolates from children with and without diarrheaKaren Ocampo0Maribel Riveros1Maria Pinedo-Bardales2Joaquim Ruiz3Theresa J. Ochoa4Instituto de Medicina Tropical “Alexander von Humboldt”, Universidad Peruana Cayetano Heredia, Lima, Perú; Universidad Nacional Federico Villarreal, Lima, Perú.Instituto de Medicina Tropical “Alexander von Humboldt”, Universidad Peruana Cayetano Heredia, Lima, Perú; Universidad Nacional Federico Villarreal, Lima, Perú.Instituto de Medicina Tropical “Alexander von Humboldt”, Universidad Peruana Cayetano Heredia, Lima, Perú; Facultad de Ciencias, Universidad Nacional de Piura, Piura, PerúISGlobal, Hospital Clínic - Universitat de Barcelona, Barcelona, España; Laboratorio de Microbiología Molecular y Genómica Bacteriana, Universidad Científica del Sur, Lima, Perú.Instituto de Medicina Tropical “Alexander von Humboldt”, Universidad Peruana Cayetano Heredia, Lima, Perú; School of Public Health, University of Texas Health Science Center at Houston, Houston, Estados Unidos.The aim of the study was to determine the frequency of six genes encoding serine protease autotransporter proteins Enterobacteriaceae (SPATE) in diffusely adherent Escherichia coli (DAEC) isolates from children with (WD, n=63) and without diarrhea (WOD, n=41) from Lima, Peru. WOD were considered a control group. For the detection of the genes, 2 multiple PCRs were standardized: triple A (sigA, pet, espP) and triple B (sat, pic, espC). In both groups, the most frequent SPATE gene was Sat (39.7% of WD and 41.5% of WOD), followed by spP (20.6% and 9.7% in WD and WOD respectively). The other genes were detected in proportions lower than 10.0%, in the following order of frequency: pet, sigA, espC and pic, without significant differences between the groups. It was concluded that Sat is the most frequent SPATE in DAEC and that these strains may possess SPATE genes regardless of whether they are isolated in WD or WOD.https://rpmesp.ins.gob.pe/index.php/rpmesp/article/view/5750escherichia coli de adherencia difusafactores de virulenciadiarreaniño
collection DOAJ
language Spanish
format Article
sources DOAJ
author Karen Ocampo
Maribel Riveros
Maria Pinedo-Bardales
Joaquim Ruiz
Theresa J. Ochoa
spellingShingle Karen Ocampo
Maribel Riveros
Maria Pinedo-Bardales
Joaquim Ruiz
Theresa J. Ochoa
Frequency of serine protease autotransporters of Enterobacteriaceae (SPATE) encoding genes in diffusely adherent Escherichia coli (DAEC) isolates from children with and without diarrhea
Revista Peruana de Medicina Experimental y Salud Pública
escherichia coli de adherencia difusa
factores de virulencia
diarrea
niño
author_facet Karen Ocampo
Maribel Riveros
Maria Pinedo-Bardales
Joaquim Ruiz
Theresa J. Ochoa
author_sort Karen Ocampo
title Frequency of serine protease autotransporters of Enterobacteriaceae (SPATE) encoding genes in diffusely adherent Escherichia coli (DAEC) isolates from children with and without diarrhea
title_short Frequency of serine protease autotransporters of Enterobacteriaceae (SPATE) encoding genes in diffusely adherent Escherichia coli (DAEC) isolates from children with and without diarrhea
title_full Frequency of serine protease autotransporters of Enterobacteriaceae (SPATE) encoding genes in diffusely adherent Escherichia coli (DAEC) isolates from children with and without diarrhea
title_fullStr Frequency of serine protease autotransporters of Enterobacteriaceae (SPATE) encoding genes in diffusely adherent Escherichia coli (DAEC) isolates from children with and without diarrhea
title_full_unstemmed Frequency of serine protease autotransporters of Enterobacteriaceae (SPATE) encoding genes in diffusely adherent Escherichia coli (DAEC) isolates from children with and without diarrhea
title_sort frequency of serine protease autotransporters of enterobacteriaceae (spate) encoding genes in diffusely adherent escherichia coli (daec) isolates from children with and without diarrhea
publisher Instituto Nacional de Salud
series Revista Peruana de Medicina Experimental y Salud Pública
issn 1726-4634
1726-4642
publishDate 2021-03-01
description The aim of the study was to determine the frequency of six genes encoding serine protease autotransporter proteins Enterobacteriaceae (SPATE) in diffusely adherent Escherichia coli (DAEC) isolates from children with (WD, n=63) and without diarrhea (WOD, n=41) from Lima, Peru. WOD were considered a control group. For the detection of the genes, 2 multiple PCRs were standardized: triple A (sigA, pet, espP) and triple B (sat, pic, espC). In both groups, the most frequent SPATE gene was Sat (39.7% of WD and 41.5% of WOD), followed by spP (20.6% and 9.7% in WD and WOD respectively). The other genes were detected in proportions lower than 10.0%, in the following order of frequency: pet, sigA, espC and pic, without significant differences between the groups. It was concluded that Sat is the most frequent SPATE in DAEC and that these strains may possess SPATE genes regardless of whether they are isolated in WD or WOD.
topic escherichia coli de adherencia difusa
factores de virulencia
diarrea
niño
url https://rpmesp.ins.gob.pe/index.php/rpmesp/article/view/5750
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