Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France

Abstract Bacteria belonging to the genus Pectobacterium are responsible for soft rot disease on a wide range of cultivated crops. The “Pectobacterium peruviense” specie, recently proposed inside the Pectobacterium genus, gathers strains isolated from potato tubers cultivated in Peru at high altitude...

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Main Authors: Pierre Faye, Claire Bertrand, Jacques Pédron, Marie-Anne Barny
Format: Article
Language:English
Published: BMC 2018-10-01
Series:Standards in Genomic Sciences
Subjects:
Online Access:http://link.springer.com/article/10.1186/s40793-018-0332-0
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spelling doaj-afc18a107b78438f92eca1d19ed119bf2020-11-24T21:59:43ZengBMCStandards in Genomic Sciences1944-32772018-10-011311810.1186/s40793-018-0332-0Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in FrancePierre Faye0Claire Bertrand1Jacques Pédron2Marie-Anne Barny3Institute of Ecology and Environmental sciences-Paris, Sorbonne Université, INRAInstitute of Ecology and Environmental sciences-Paris, Sorbonne Université, INRAInstitute of Ecology and Environmental sciences-Paris, Sorbonne Université, INRAInstitute of Ecology and Environmental sciences-Paris, Sorbonne Université, INRAAbstract Bacteria belonging to the genus Pectobacterium are responsible for soft rot disease on a wide range of cultivated crops. The “Pectobacterium peruviense” specie, recently proposed inside the Pectobacterium genus, gathers strains isolated from potato tubers cultivated in Peru at high altitude. Here we report the draft genome sequence of two strains belonging to “P. peruviense” isolated from river water in France indicating that the geographic distribution of this specie is likely to be larger than previously anticipated. We compared these genomes with the one published from the “P. peruviense” specie type strain isolated in Peru.http://link.springer.com/article/10.1186/s40793-018-0332-0Pectobacterium peruvienseSoft rotPlant pathogenWaterFrance
collection DOAJ
language English
format Article
sources DOAJ
author Pierre Faye
Claire Bertrand
Jacques Pédron
Marie-Anne Barny
spellingShingle Pierre Faye
Claire Bertrand
Jacques Pédron
Marie-Anne Barny
Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France
Standards in Genomic Sciences
Pectobacterium peruviense
Soft rot
Plant pathogen
Water
France
author_facet Pierre Faye
Claire Bertrand
Jacques Pédron
Marie-Anne Barny
author_sort Pierre Faye
title Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France
title_short Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France
title_full Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France
title_fullStr Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France
title_full_unstemmed Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France
title_sort draft genomes of “pectobacterium peruviense” strains isolated from fresh water in france
publisher BMC
series Standards in Genomic Sciences
issn 1944-3277
publishDate 2018-10-01
description Abstract Bacteria belonging to the genus Pectobacterium are responsible for soft rot disease on a wide range of cultivated crops. The “Pectobacterium peruviense” specie, recently proposed inside the Pectobacterium genus, gathers strains isolated from potato tubers cultivated in Peru at high altitude. Here we report the draft genome sequence of two strains belonging to “P. peruviense” isolated from river water in France indicating that the geographic distribution of this specie is likely to be larger than previously anticipated. We compared these genomes with the one published from the “P. peruviense” specie type strain isolated in Peru.
topic Pectobacterium peruviense
Soft rot
Plant pathogen
Water
France
url http://link.springer.com/article/10.1186/s40793-018-0332-0
work_keys_str_mv AT pierrefaye draftgenomesofpectobacteriumperuviensestrainsisolatedfromfreshwaterinfrance
AT clairebertrand draftgenomesofpectobacteriumperuviensestrainsisolatedfromfreshwaterinfrance
AT jacquespedron draftgenomesofpectobacteriumperuviensestrainsisolatedfromfreshwaterinfrance
AT marieannebarny draftgenomesofpectobacteriumperuviensestrainsisolatedfromfreshwaterinfrance
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