MicroRNA Biogenesis Pathway Genes Are Deregulated in Colorectal Cancer

MicroRNAs (miRNAs) are small non-coding RNAs that post-transcriptionally regulate gene expression. Each step of their production and maturation has to be strictly regulated, as any disruption of control mechanisms may lead to cancer. Thus, we have measured the expression of 19 genes involved in miRN...

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Main Authors: Petra Vychytilova-Faltejskova, Alena Svobodova Kovarikova, Tomas Grolich, Vladimir Prochazka, Katerina Slaba, Tana Machackova, Jana Halamkova, Marek Svoboda, Zdenek Kala, Igor Kiss, Ondrej Slaby
Format: Article
Language:English
Published: MDPI AG 2019-09-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/20/18/4460
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spelling doaj-b01ea035d464473fb22dd2c0bfbb334e2020-11-25T02:43:19ZengMDPI AGInternational Journal of Molecular Sciences1422-00672019-09-012018446010.3390/ijms20184460ijms20184460MicroRNA Biogenesis Pathway Genes Are Deregulated in Colorectal CancerPetra Vychytilova-Faltejskova0Alena Svobodova Kovarikova1Tomas Grolich2Vladimir Prochazka3Katerina Slaba4Tana Machackova5Jana Halamkova6Marek Svoboda7Zdenek Kala8Igor Kiss9Ondrej Slaby10Central European Institute of Technology, Masaryk University, Kamenice 753/5, 62500 Brno, Czech RepublicCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 62500 Brno, Czech RepublicDepartment of Surgery, University Hospital Brno, Jihlavska 340/20, 62500 Brno, Czech RepublicDepartment of Surgery, University Hospital Brno, Jihlavska 340/20, 62500 Brno, Czech RepublicFaculty of Medicine, Masaryk University, Kamenice 5, 62500 Brno, Czech RepublicCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 62500 Brno, Czech RepublicDepartment of Comprehensive Cancer Care, Masaryk Memorial Cancer Institute, Faculty of Medicine, Masaryk University, 62500 Brno, Czech RepublicCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 62500 Brno, Czech RepublicDepartment of Surgery, University Hospital Brno, Jihlavska 340/20, 62500 Brno, Czech RepublicFaculty of Medicine, Masaryk University, Kamenice 5, 62500 Brno, Czech RepublicCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 62500 Brno, Czech RepublicMicroRNAs (miRNAs) are small non-coding RNAs that post-transcriptionally regulate gene expression. Each step of their production and maturation has to be strictly regulated, as any disruption of control mechanisms may lead to cancer. Thus, we have measured the expression of 19 genes involved in miRNAs biogenesis pathway in tumor tissues of 239 colorectal cancer (CRC) patients, 17 CRC patients with liver metastases and 239 adjacent tissues using real-time PCR. Subsequently, the expression of analyzed genes was correlated with the clinical-pathological features as well as with the survival of patients. In total, significant over-expression of all analyzed genes was observed in tumor tissues as well as in liver metastases except for LIN28A/B. Furthermore, it was shown that the deregulated levels of some of the analyzed genes significantly correlate with tumor stage, grade, location, size and lymph node positivity. Finally, high levels of DROSHA and TARBP2 were associated with shorter disease-free survival, while the over-expression of XPO5, TNRC6A and DDX17 was detected in tissues of patients with shorter overall survival and poor prognosis. Our data indicate that changed levels of miRNA biogenesis genes may contribute to origin as well as progression of CRC; thus, these molecules could serve as potential therapeutic targets.https://www.mdpi.com/1422-0067/20/18/4460microRNAbiogenesiscolorectal cancerdisease-free survivaloverall survivalRT-qPCR
collection DOAJ
language English
format Article
sources DOAJ
author Petra Vychytilova-Faltejskova
Alena Svobodova Kovarikova
Tomas Grolich
Vladimir Prochazka
Katerina Slaba
Tana Machackova
Jana Halamkova
Marek Svoboda
Zdenek Kala
Igor Kiss
Ondrej Slaby
spellingShingle Petra Vychytilova-Faltejskova
Alena Svobodova Kovarikova
Tomas Grolich
Vladimir Prochazka
Katerina Slaba
Tana Machackova
Jana Halamkova
Marek Svoboda
Zdenek Kala
Igor Kiss
Ondrej Slaby
MicroRNA Biogenesis Pathway Genes Are Deregulated in Colorectal Cancer
International Journal of Molecular Sciences
microRNA
biogenesis
colorectal cancer
disease-free survival
overall survival
RT-qPCR
author_facet Petra Vychytilova-Faltejskova
Alena Svobodova Kovarikova
Tomas Grolich
Vladimir Prochazka
Katerina Slaba
Tana Machackova
Jana Halamkova
Marek Svoboda
Zdenek Kala
Igor Kiss
Ondrej Slaby
author_sort Petra Vychytilova-Faltejskova
title MicroRNA Biogenesis Pathway Genes Are Deregulated in Colorectal Cancer
title_short MicroRNA Biogenesis Pathway Genes Are Deregulated in Colorectal Cancer
title_full MicroRNA Biogenesis Pathway Genes Are Deregulated in Colorectal Cancer
title_fullStr MicroRNA Biogenesis Pathway Genes Are Deregulated in Colorectal Cancer
title_full_unstemmed MicroRNA Biogenesis Pathway Genes Are Deregulated in Colorectal Cancer
title_sort microrna biogenesis pathway genes are deregulated in colorectal cancer
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2019-09-01
description MicroRNAs (miRNAs) are small non-coding RNAs that post-transcriptionally regulate gene expression. Each step of their production and maturation has to be strictly regulated, as any disruption of control mechanisms may lead to cancer. Thus, we have measured the expression of 19 genes involved in miRNAs biogenesis pathway in tumor tissues of 239 colorectal cancer (CRC) patients, 17 CRC patients with liver metastases and 239 adjacent tissues using real-time PCR. Subsequently, the expression of analyzed genes was correlated with the clinical-pathological features as well as with the survival of patients. In total, significant over-expression of all analyzed genes was observed in tumor tissues as well as in liver metastases except for LIN28A/B. Furthermore, it was shown that the deregulated levels of some of the analyzed genes significantly correlate with tumor stage, grade, location, size and lymph node positivity. Finally, high levels of DROSHA and TARBP2 were associated with shorter disease-free survival, while the over-expression of XPO5, TNRC6A and DDX17 was detected in tissues of patients with shorter overall survival and poor prognosis. Our data indicate that changed levels of miRNA biogenesis genes may contribute to origin as well as progression of CRC; thus, these molecules could serve as potential therapeutic targets.
topic microRNA
biogenesis
colorectal cancer
disease-free survival
overall survival
RT-qPCR
url https://www.mdpi.com/1422-0067/20/18/4460
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