The prognostic value of JUNB-positive CTCs in metastatic breast cancer: from bioinformatics to phenotypic characterization
Abstract Background Circulating tumor cells (CTCs) are important for metastatic dissemination of cancer. They can provide useful information, regarding biological features and tumor heterogeneity; however, their detection and characterization are difficult due to their limited number in the bloodstr...
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doaj-b10336567c6e4296a1abefae5e0082b62021-03-02T04:53:50ZengBMCBreast Cancer Research1465-542X2019-08-0121111310.1186/s13058-019-1166-4The prognostic value of JUNB-positive CTCs in metastatic breast cancer: from bioinformatics to phenotypic characterizationGalatea Kallergi0Vasileia Tsintari1Stelios Sfakianakis2Ekaterini Bei3Eleni Lagoudaki4Anastasios Koutsopoulos5Nefeli Zacharopoulou6Saad Alkahtani7Saud Alarifi8Christos Stournaras9Michalis Zervakis10Vassilis Georgoulias11Laboratory of Τumor Cell Βiology, Medical School, University of CreteDepartment of Oncology, Hematology, Rheumatology, Immunology and Pulmology, University HospitalComputational BioMedicine Laboratory, Institute of Computer Science, Foundation for Research and TechnologyDigital Image and Signal Processing Laboratory, School of Electrical and Computer Engineering, Technical University of CreteDepartment of Pathology, University General Hospital of HeraklionDepartment of Pathology, University General Hospital of HeraklionDepartment of Biochemistry, Medical School, University of CreteDepartment of Biochemistry, Medical School, University of CreteDepartment of Biochemistry, Medical School, University of CreteDepartment of Biochemistry, Medical School, University of CreteDigital Image and Signal Processing Laboratory, School of Electrical and Computer Engineering, Technical University of CreteLaboratory of Τumor Cell Βiology, Medical School, University of CreteAbstract Background Circulating tumor cells (CTCs) are important for metastatic dissemination of cancer. They can provide useful information, regarding biological features and tumor heterogeneity; however, their detection and characterization are difficult due to their limited number in the bloodstream and their mesenchymal characteristics. Therefore, new biomarkers are needed to address these questions. Methods Bioinformatics functional enrichment analysis revealed a subgroup of 24 genes, potentially overexpressed in CTCs. Among these genes, the chemokine receptor CXCR4 plays a central role. After prioritization according to the CXCR4 corresponding pathways, five molecules (JUNB, YWHAB, TYROBP, NFYA, and PRDX1) were selected for further analysis in biological samples. The SKBR3, MDA-MB231, and MCF7 cell lines, as well as PBMCs from normal (n = 10) blood donors, were used as controls to define the expression pattern of all the examined molecules. Consequently, 100 previously untreated metastatic breast cancer (mBC) patients (n = 100) were analyzed using the following combinations of antibodies: CK (cytokeratin)/CXCR4/JUNB, CK/NFYA/ΥWHΑΒ (14-3-3), and CK/TYROBP/PRDX1. A threshold value for every molecule was considered the mean expression in normal PBMCs. Results Quantification of CXCR4 revealed overexpression of the receptor in SKBR3 and in CTCs, following the subsequent scale (SKBR3>CTCs>Hela>MCF7>MDA-MB231). JUNB was also overexpressed in CTCs (SKBR3>CTCs>MCF7>MDA-MB231>Hela). According to the defined threshold for each molecule, CXCR4-positive CTCs were identified in 90% of the patients with detectable tumor cells in their blood. In addition, 65%, 75%, 14.3%, and 12.5% of the patients harbored JUNB-, TYROBP-, NFYA-, and PRDX-positive CTCs, respectively. Conversely, none of the patients revealed YWHAB-positive CTCs. Interestingly, JUNB expression in CTCs was phenotypically and statistically enhanced compared to patients’ blood cells (p = 0.002) providing a possible new biomarker for CTCs. Furthermore, the detection of JUNB-positive CTCs in patients was associated with poorer PFS (p = 0.015) and OS (p = 0.002). Moreover, JUNB staining of 11 primary and 4 metastatic tumors from the same cohort of patients revealed a dramatic increase of JUNB expression in metastasis. Conclusions CXCR4, JUNB, and TYROBP were overexpressed in CTCs, but only the expression of JUNB was associated with poor prognosis, providing a new biomarker and a potential therapeutic target for the elimination of CTCs.http://link.springer.com/article/10.1186/s13058-019-1166-4Breast cancerCTCsJUNBCXCR4Bioinformatics |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Galatea Kallergi Vasileia Tsintari Stelios Sfakianakis Ekaterini Bei Eleni Lagoudaki Anastasios Koutsopoulos Nefeli Zacharopoulou Saad Alkahtani Saud Alarifi Christos Stournaras Michalis Zervakis Vassilis Georgoulias |
spellingShingle |
Galatea Kallergi Vasileia Tsintari Stelios Sfakianakis Ekaterini Bei Eleni Lagoudaki Anastasios Koutsopoulos Nefeli Zacharopoulou Saad Alkahtani Saud Alarifi Christos Stournaras Michalis Zervakis Vassilis Georgoulias The prognostic value of JUNB-positive CTCs in metastatic breast cancer: from bioinformatics to phenotypic characterization Breast Cancer Research Breast cancer CTCs JUNB CXCR4 Bioinformatics |
author_facet |
Galatea Kallergi Vasileia Tsintari Stelios Sfakianakis Ekaterini Bei Eleni Lagoudaki Anastasios Koutsopoulos Nefeli Zacharopoulou Saad Alkahtani Saud Alarifi Christos Stournaras Michalis Zervakis Vassilis Georgoulias |
author_sort |
Galatea Kallergi |
title |
The prognostic value of JUNB-positive CTCs in metastatic breast cancer: from bioinformatics to phenotypic characterization |
title_short |
The prognostic value of JUNB-positive CTCs in metastatic breast cancer: from bioinformatics to phenotypic characterization |
title_full |
The prognostic value of JUNB-positive CTCs in metastatic breast cancer: from bioinformatics to phenotypic characterization |
title_fullStr |
The prognostic value of JUNB-positive CTCs in metastatic breast cancer: from bioinformatics to phenotypic characterization |
title_full_unstemmed |
The prognostic value of JUNB-positive CTCs in metastatic breast cancer: from bioinformatics to phenotypic characterization |
title_sort |
prognostic value of junb-positive ctcs in metastatic breast cancer: from bioinformatics to phenotypic characterization |
publisher |
BMC |
series |
Breast Cancer Research |
issn |
1465-542X |
publishDate |
2019-08-01 |
description |
Abstract Background Circulating tumor cells (CTCs) are important for metastatic dissemination of cancer. They can provide useful information, regarding biological features and tumor heterogeneity; however, their detection and characterization are difficult due to their limited number in the bloodstream and their mesenchymal characteristics. Therefore, new biomarkers are needed to address these questions. Methods Bioinformatics functional enrichment analysis revealed a subgroup of 24 genes, potentially overexpressed in CTCs. Among these genes, the chemokine receptor CXCR4 plays a central role. After prioritization according to the CXCR4 corresponding pathways, five molecules (JUNB, YWHAB, TYROBP, NFYA, and PRDX1) were selected for further analysis in biological samples. The SKBR3, MDA-MB231, and MCF7 cell lines, as well as PBMCs from normal (n = 10) blood donors, were used as controls to define the expression pattern of all the examined molecules. Consequently, 100 previously untreated metastatic breast cancer (mBC) patients (n = 100) were analyzed using the following combinations of antibodies: CK (cytokeratin)/CXCR4/JUNB, CK/NFYA/ΥWHΑΒ (14-3-3), and CK/TYROBP/PRDX1. A threshold value for every molecule was considered the mean expression in normal PBMCs. Results Quantification of CXCR4 revealed overexpression of the receptor in SKBR3 and in CTCs, following the subsequent scale (SKBR3>CTCs>Hela>MCF7>MDA-MB231). JUNB was also overexpressed in CTCs (SKBR3>CTCs>MCF7>MDA-MB231>Hela). According to the defined threshold for each molecule, CXCR4-positive CTCs were identified in 90% of the patients with detectable tumor cells in their blood. In addition, 65%, 75%, 14.3%, and 12.5% of the patients harbored JUNB-, TYROBP-, NFYA-, and PRDX-positive CTCs, respectively. Conversely, none of the patients revealed YWHAB-positive CTCs. Interestingly, JUNB expression in CTCs was phenotypically and statistically enhanced compared to patients’ blood cells (p = 0.002) providing a possible new biomarker for CTCs. Furthermore, the detection of JUNB-positive CTCs in patients was associated with poorer PFS (p = 0.015) and OS (p = 0.002). Moreover, JUNB staining of 11 primary and 4 metastatic tumors from the same cohort of patients revealed a dramatic increase of JUNB expression in metastasis. Conclusions CXCR4, JUNB, and TYROBP were overexpressed in CTCs, but only the expression of JUNB was associated with poor prognosis, providing a new biomarker and a potential therapeutic target for the elimination of CTCs. |
topic |
Breast cancer CTCs JUNB CXCR4 Bioinformatics |
url |
http://link.springer.com/article/10.1186/s13058-019-1166-4 |
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