Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study

A methodology based on the concepts that arise from Density Functional Theory (CDFT) was chosen for the calculation of the global and local reactivity descriptors of the Phallotoxin family of fungal peptides. The determination of the active sites for the molecules has been achieved by resorting some...

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Main Authors: Norma Flores-Holguín, Juan Frau, Daniel Glossman-Mitnik
Format: Article
Language:English
Published: Elsevier 2019-08-01
Series:Heliyon
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S240584401935995X
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spelling doaj-b3a3bf8432e04352a97ea0099e8e50782020-11-25T03:26:44ZengElsevierHeliyon2405-84402019-08-0158e02335Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT studyNorma Flores-Holguín0Juan Frau1Daniel Glossman-Mitnik2Laboratorio Virtual NANOCOSMOS, Departamento de Medio Ambiente y Energía, Centro de Investigación en Materiales Avanzados, Chihuahua, Chih 31136, MexicoDepartament de Química, Universitat de les Illes Balears, Palma de Mallorca 07122, SpainDepartament de Química, Universitat de les Illes Balears, Palma de Mallorca 07122, Spain; Laboratorio Virtual NANOCOSMOS, Departamento de Medio Ambiente y Energía, Centro de Investigación en Materiales Avanzados, Chihuahua, Chih 31136, Mexico; Corresponding author at: Laboratorio Virtual NANOCOSMOS, Departamento de Medio Ambiente y Energía, Centro de Investigación en Materiales Avanzados, Chihuahua, Chih 31136, Mexico.A methodology based on the concepts that arise from Density Functional Theory (CDFT) was chosen for the calculation of the global and local reactivity descriptors of the Phallotoxin family of fungal peptides. The determination of the active sites for the molecules has been achieved by resorting some descriptors within Molecular Electron Density Theory (MEDT) like the Dual Descriptor and the Parr functions. Phallosacin has been found as the most reactive of the peptides on the basis of the calculated Global Reactivity Descriptors. The pKas of the seven studied peptides were established using a proposed relationship between this property and the calculated Global Hardness. The bioactivity properties of the peptides considered in this study were obtained by resorting to a homology model by comparison with the bioactivity of related molecules in their interaction with different receptors.http://www.sciencedirect.com/science/article/pii/S240584401935995XNatural product chemistryOrganic chemistryTheoretical chemistryPhallotoxinsComputational ChemistryConceptual DFT
collection DOAJ
language English
format Article
sources DOAJ
author Norma Flores-Holguín
Juan Frau
Daniel Glossman-Mitnik
spellingShingle Norma Flores-Holguín
Juan Frau
Daniel Glossman-Mitnik
Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study
Heliyon
Natural product chemistry
Organic chemistry
Theoretical chemistry
Phallotoxins
Computational Chemistry
Conceptual DFT
author_facet Norma Flores-Holguín
Juan Frau
Daniel Glossman-Mitnik
author_sort Norma Flores-Holguín
title Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study
title_short Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study
title_full Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study
title_fullStr Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study
title_full_unstemmed Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study
title_sort chemical reactivity and bioactivity properties of the phallotoxin family of fungal peptides based on conceptual peptidology and dft study
publisher Elsevier
series Heliyon
issn 2405-8440
publishDate 2019-08-01
description A methodology based on the concepts that arise from Density Functional Theory (CDFT) was chosen for the calculation of the global and local reactivity descriptors of the Phallotoxin family of fungal peptides. The determination of the active sites for the molecules has been achieved by resorting some descriptors within Molecular Electron Density Theory (MEDT) like the Dual Descriptor and the Parr functions. Phallosacin has been found as the most reactive of the peptides on the basis of the calculated Global Reactivity Descriptors. The pKas of the seven studied peptides were established using a proposed relationship between this property and the calculated Global Hardness. The bioactivity properties of the peptides considered in this study were obtained by resorting to a homology model by comparison with the bioactivity of related molecules in their interaction with different receptors.
topic Natural product chemistry
Organic chemistry
Theoretical chemistry
Phallotoxins
Computational Chemistry
Conceptual DFT
url http://www.sciencedirect.com/science/article/pii/S240584401935995X
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AT danielglossmanmitnik chemicalreactivityandbioactivitypropertiesofthephallotoxinfamilyoffungalpeptidesbasedonconceptualpeptidologyanddftstudy
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