Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study
A methodology based on the concepts that arise from Density Functional Theory (CDFT) was chosen for the calculation of the global and local reactivity descriptors of the Phallotoxin family of fungal peptides. The determination of the active sites for the molecules has been achieved by resorting some...
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doaj-b3a3bf8432e04352a97ea0099e8e50782020-11-25T03:26:44ZengElsevierHeliyon2405-84402019-08-0158e02335Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT studyNorma Flores-Holguín0Juan Frau1Daniel Glossman-Mitnik2Laboratorio Virtual NANOCOSMOS, Departamento de Medio Ambiente y Energía, Centro de Investigación en Materiales Avanzados, Chihuahua, Chih 31136, MexicoDepartament de Química, Universitat de les Illes Balears, Palma de Mallorca 07122, SpainDepartament de Química, Universitat de les Illes Balears, Palma de Mallorca 07122, Spain; Laboratorio Virtual NANOCOSMOS, Departamento de Medio Ambiente y Energía, Centro de Investigación en Materiales Avanzados, Chihuahua, Chih 31136, Mexico; Corresponding author at: Laboratorio Virtual NANOCOSMOS, Departamento de Medio Ambiente y Energía, Centro de Investigación en Materiales Avanzados, Chihuahua, Chih 31136, Mexico.A methodology based on the concepts that arise from Density Functional Theory (CDFT) was chosen for the calculation of the global and local reactivity descriptors of the Phallotoxin family of fungal peptides. The determination of the active sites for the molecules has been achieved by resorting some descriptors within Molecular Electron Density Theory (MEDT) like the Dual Descriptor and the Parr functions. Phallosacin has been found as the most reactive of the peptides on the basis of the calculated Global Reactivity Descriptors. The pKas of the seven studied peptides were established using a proposed relationship between this property and the calculated Global Hardness. The bioactivity properties of the peptides considered in this study were obtained by resorting to a homology model by comparison with the bioactivity of related molecules in their interaction with different receptors.http://www.sciencedirect.com/science/article/pii/S240584401935995XNatural product chemistryOrganic chemistryTheoretical chemistryPhallotoxinsComputational ChemistryConceptual DFT |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Norma Flores-Holguín Juan Frau Daniel Glossman-Mitnik |
spellingShingle |
Norma Flores-Holguín Juan Frau Daniel Glossman-Mitnik Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study Heliyon Natural product chemistry Organic chemistry Theoretical chemistry Phallotoxins Computational Chemistry Conceptual DFT |
author_facet |
Norma Flores-Holguín Juan Frau Daniel Glossman-Mitnik |
author_sort |
Norma Flores-Holguín |
title |
Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study |
title_short |
Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study |
title_full |
Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study |
title_fullStr |
Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study |
title_full_unstemmed |
Chemical reactivity and bioactivity properties of the Phallotoxin family of fungal peptides based on Conceptual Peptidology and DFT study |
title_sort |
chemical reactivity and bioactivity properties of the phallotoxin family of fungal peptides based on conceptual peptidology and dft study |
publisher |
Elsevier |
series |
Heliyon |
issn |
2405-8440 |
publishDate |
2019-08-01 |
description |
A methodology based on the concepts that arise from Density Functional Theory (CDFT) was chosen for the calculation of the global and local reactivity descriptors of the Phallotoxin family of fungal peptides. The determination of the active sites for the molecules has been achieved by resorting some descriptors within Molecular Electron Density Theory (MEDT) like the Dual Descriptor and the Parr functions. Phallosacin has been found as the most reactive of the peptides on the basis of the calculated Global Reactivity Descriptors. The pKas of the seven studied peptides were established using a proposed relationship between this property and the calculated Global Hardness. The bioactivity properties of the peptides considered in this study were obtained by resorting to a homology model by comparison with the bioactivity of related molecules in their interaction with different receptors. |
topic |
Natural product chemistry Organic chemistry Theoretical chemistry Phallotoxins Computational Chemistry Conceptual DFT |
url |
http://www.sciencedirect.com/science/article/pii/S240584401935995X |
work_keys_str_mv |
AT normafloresholguin chemicalreactivityandbioactivitypropertiesofthephallotoxinfamilyoffungalpeptidesbasedonconceptualpeptidologyanddftstudy AT juanfrau chemicalreactivityandbioactivitypropertiesofthephallotoxinfamilyoffungalpeptidesbasedonconceptualpeptidologyanddftstudy AT danielglossmanmitnik chemicalreactivityandbioactivitypropertiesofthephallotoxinfamilyoffungalpeptidesbasedonconceptualpeptidologyanddftstudy |
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