Applying Cryo-X-ray Photoelectron Spectroscopy to Study the Surface Chemical Composition of Fungi and Viruses
Interaction between microorganisms and their surroundings are generally mediated via the cell wall or cell envelope. An understanding of the overall chemical composition of these surface layers may give clues on how these interactions occur and suggest mechanisms to manipulate them. This knowledge i...
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doaj-b48ccaed7bbc4e6d90e98a20485c23112021-05-28T09:11:05ZengFrontiers Media S.A.Frontiers in Chemistry2296-26462021-05-01910.3389/fchem.2021.666853666853Applying Cryo-X-ray Photoelectron Spectroscopy to Study the Surface Chemical Composition of Fungi and VirusesAndrey Shchukarev0Emelie Backman1Emelie Backman2Samuel Watts3Samuel Watts4Stefan Salentinig5Constantin F. Urban6Constantin F. Urban7Madeleine Ramstedt8Madeleine Ramstedt9Department of Chemistry, Umeå University, Umeå, SwedenDepartment of Clinical Microbiology, Umeå University, Umeå, SwedenUmeå Centre for Microbial Research (UCMR), Umeå University, Umeå, SwedenBiointerfaces Lab, Empa, Swiss Federal Laboratories for Material Science and Technology, St. Gallen, SwitzerlandDepartment of Chemistry, Fribourg University, Fribourg, SwitzerlandDepartment of Chemistry, Fribourg University, Fribourg, SwitzerlandDepartment of Clinical Microbiology, Umeå University, Umeå, SwedenUmeå Centre for Microbial Research (UCMR), Umeå University, Umeå, SwedenDepartment of Chemistry, Umeå University, Umeå, SwedenUmeå Centre for Microbial Research (UCMR), Umeå University, Umeå, SwedenInteraction between microorganisms and their surroundings are generally mediated via the cell wall or cell envelope. An understanding of the overall chemical composition of these surface layers may give clues on how these interactions occur and suggest mechanisms to manipulate them. This knowledge is key, for instance, in research aiming to reduce colonization of medical devices and device-related infections from different types of microorganisms. In this context, X-ray photoelectron spectroscopy (XPS) is a powerful technique as its analysis depth below 10 nm enables studies of the outermost surface structures of microorganism. Of specific interest for the study of biological systems is cryogenic XPS (cryo-XPS). This technique allows studies of intact fast-frozen hydrated samples without the need for pre-treatment procedures that may cause the cell structure to collapse or change due to the loss of water. Previously, cryo-XPS has been applied to study bacterial and algal surfaces with respect to their composition of lipids, polysaccharides and peptide (protein and/or peptidoglycan). This contribution focuses onto two other groups of microorganisms with widely different architecture and modes of life, namely fungi and viruses. It evaluates to what extent existing models for data treatment of XPS spectra can be applied to understand the chemical composition of their very different surface layers. XPS data from model organisms as well as reference substances representing specific building blocks of their surface were collected and are presented. These results aims to guide future analysis of the surface chemical composition of biological systems.https://www.frontiersin.org/articles/10.3389/fchem.2021.666853/fullcryo-XPSvirusfungireference databacteriophagesurface chemistry |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Andrey Shchukarev Emelie Backman Emelie Backman Samuel Watts Samuel Watts Stefan Salentinig Constantin F. Urban Constantin F. Urban Madeleine Ramstedt Madeleine Ramstedt |
spellingShingle |
Andrey Shchukarev Emelie Backman Emelie Backman Samuel Watts Samuel Watts Stefan Salentinig Constantin F. Urban Constantin F. Urban Madeleine Ramstedt Madeleine Ramstedt Applying Cryo-X-ray Photoelectron Spectroscopy to Study the Surface Chemical Composition of Fungi and Viruses Frontiers in Chemistry cryo-XPS virus fungi reference data bacteriophage surface chemistry |
author_facet |
Andrey Shchukarev Emelie Backman Emelie Backman Samuel Watts Samuel Watts Stefan Salentinig Constantin F. Urban Constantin F. Urban Madeleine Ramstedt Madeleine Ramstedt |
author_sort |
Andrey Shchukarev |
title |
Applying Cryo-X-ray Photoelectron Spectroscopy to Study the Surface Chemical Composition of Fungi and Viruses |
title_short |
Applying Cryo-X-ray Photoelectron Spectroscopy to Study the Surface Chemical Composition of Fungi and Viruses |
title_full |
Applying Cryo-X-ray Photoelectron Spectroscopy to Study the Surface Chemical Composition of Fungi and Viruses |
title_fullStr |
Applying Cryo-X-ray Photoelectron Spectroscopy to Study the Surface Chemical Composition of Fungi and Viruses |
title_full_unstemmed |
Applying Cryo-X-ray Photoelectron Spectroscopy to Study the Surface Chemical Composition of Fungi and Viruses |
title_sort |
applying cryo-x-ray photoelectron spectroscopy to study the surface chemical composition of fungi and viruses |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Chemistry |
issn |
2296-2646 |
publishDate |
2021-05-01 |
description |
Interaction between microorganisms and their surroundings are generally mediated via the cell wall or cell envelope. An understanding of the overall chemical composition of these surface layers may give clues on how these interactions occur and suggest mechanisms to manipulate them. This knowledge is key, for instance, in research aiming to reduce colonization of medical devices and device-related infections from different types of microorganisms. In this context, X-ray photoelectron spectroscopy (XPS) is a powerful technique as its analysis depth below 10 nm enables studies of the outermost surface structures of microorganism. Of specific interest for the study of biological systems is cryogenic XPS (cryo-XPS). This technique allows studies of intact fast-frozen hydrated samples without the need for pre-treatment procedures that may cause the cell structure to collapse or change due to the loss of water. Previously, cryo-XPS has been applied to study bacterial and algal surfaces with respect to their composition of lipids, polysaccharides and peptide (protein and/or peptidoglycan). This contribution focuses onto two other groups of microorganisms with widely different architecture and modes of life, namely fungi and viruses. It evaluates to what extent existing models for data treatment of XPS spectra can be applied to understand the chemical composition of their very different surface layers. XPS data from model organisms as well as reference substances representing specific building blocks of their surface were collected and are presented. These results aims to guide future analysis of the surface chemical composition of biological systems. |
topic |
cryo-XPS virus fungi reference data bacteriophage surface chemistry |
url |
https://www.frontiersin.org/articles/10.3389/fchem.2021.666853/full |
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